FFCP PHASE1:Hg19::chr8:23282820..23282846,-: Difference between revisions
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|id=chr8:23282820..23282846,-
|short_description=p11@LOXL2
|description=CAGE_peak_11_at_LOXL2_5end
|association_with_transcript=0bp_to_ENST00000520871_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4017 | |EntrezGene=4017 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6666 | |HGNC=6666 | ||
|TSSclassifier=strong | |||
|UniProt=E5RHH3 | |UniProt=E5RHH3 | ||
|association_with_transcript=0bp_to_ENST00000520871_5end | |||
|cluster_id=chr8:23282820..23282846,- | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_11_at_LOXL2_5end | |||
|id=chr8:23282820..23282846,- | |||
|ontology_enrichment_celltype=CL:0000945!8.09e-14!24;CL:0000826!8.09e-14!24;CL:0000542!1.65e-09!53;CL:0000051!1.65e-09!53;CL:0000819!2.17e-08!1;CL:0000838!1.13e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.33e-17;24!CL:0000542;1.13e-11;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.45e-17,24;CL:0000826,5.45e-17,24;CL:0000542,7.02e-17,53;CL:0000051,7.02e-17,53;CL:0000838,3.74e-12,52;CL:0002087,9.34e-08,115 | |||
|ontology_enrichment_development_v019=UBERON:0001045;4.61e-26;1!CL:0000051;1.13e-11;53 | |||
|ontology_enrichment_disease=DOID:0060058!9.15e-12!10;DOID:12603!1.52e-08!1;DOID:0060073!2.17e-08!1;DOID:8675!2.17e-08!1;DOID:3111!3.57e-08!1;DOID:3603!3.57e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:12603;8.64e-26;1!DOID:0060058;5.33e-23;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,9.79e-26,1;DOID:0060058,5.13e-23,10;DOID:2531,2.30e-12,51;DOID:0060083,2.30e-12,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.01e-09!115;UBERON:0002372!1.05e-08!1;UBERON:0001961!1.05e-08!1;UBERON:0001744!1.05e-08!1;UBERON:0001735!1.05e-08!1;UBERON:0001154!1.13e-08!1;UBERON:0001153!1.13e-08!1;UBERON:0000029!2.69e-08!1;UBERON:0002336!6.24e-08!1;UBERON:0001018!6.24e-08!1;UBERON:0002473!6.24e-08!1;UBERON:0005340!6.24e-08!1;UBERON:0002316!6.24e-08!1;UBERON:0003544!6.24e-08!1;UBERON:0001020!6.24e-08!1;UBERON:0005970!6.24e-08!1;UBERON:0002437!6.24e-08!1;UBERON:0002363!6.68e-08!1;UBERON:0007647!6.68e-08!1;UBERON:0010115!6.68e-08!1;UBERON:0001155!1.37e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.78e-26;1!UBERON:0001961;2.78e-26;1!UBERON:0001744;2.78e-26;1!UBERON:0001042;2.78e-26;1!UBERON:0001735;2.78e-26;1!UBERON:0001154;4.61e-26;1!UBERON:0001153;4.61e-26;1!UBERON:0009854;4.61e-26;1!UBERON:0006562;7.30e-14;2!UBERON:0009856;1.59e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,2.78e-26,1;UBERON:0001961,2.78e-26,1;UBERON:0001744,2.78e-26,1;UBERON:0001735,2.78e-26,1;UBERON:0001154,3.58e-26,1;UBERON:0001153,3.58e-26,1;UBERON:0001045,3.58e-26,1 | |||
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|short_description=p11@LOXL2 | |||
}} | }} |
Latest revision as of 14:01, 17 September 2015
Short description: | p11@LOXL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_LOXL2_5end |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | 0bp_to_ENST00000520871_5end |
EntrezGene: | LOXL2 |
HGNC: | 6666 |
UniProt: | E5RHH3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.45e-17 | 24 |
pro-B cell | 5.45e-17 | 24 |
lymphocyte | 7.02e-17 | 53 |
common lymphoid progenitor | 7.02e-17 | 53 |
lymphoid lineage restricted progenitor cell | 3.74e-12 | 52 |
nongranular leukocyte | 9.34e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
tonsil | 2.78e-26 | 1 |
mucosa-associated lymphoid tissue | 2.78e-26 | 1 |
lymphoid tissue | 2.78e-26 | 1 |
tonsillar ring | 2.78e-26 | 1 |
vermiform appendix | 3.58e-26 | 1 |
caecum | 3.58e-26 | 1 |
midgut | 3.58e-26 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 9.79e-26 | 1 |
lymphoma | 5.13e-23 | 10 |
hematologic cancer | 2.30e-12 | 51 |
immune system cancer | 2.30e-12 | 51 |