FFCP PHASE1:Hg19::chr15:63796867..63796887,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9960 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12626 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000559873_5end | |||
|cluster_id=chr15:63796867..63796887,+ | |||
|coexpression_cluster_id=C1308 | |||
|description=CAGE_peak_2_at_USP3_5end | |||
|id=chr15:63796867..63796887,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.62e-53!140;CL:0000037!3.27e-48!172;CL:0000566!3.27e-48!172;CL:0002032!1.14e-45!165;CL:0000837!1.14e-45!165;CL:0002087!1.33e-44!119;CL:0000988!2.98e-43!182;CL:0002031!1.21e-41!124;CL:0000766!1.16e-33!76;CL:0000557!2.60e-29!71;CL:0000763!4.04e-29!112;CL:0000049!4.04e-29!112;CL:0002009!4.77e-28!65;CL:0002194!6.98e-28!63;CL:0000576!6.98e-28!63;CL:0000040!6.98e-28!63;CL:0000559!6.98e-28!63;CL:0000839!3.34e-26!70;CL:0000860!4.70e-26!45;CL:0002057!1.16e-25!42;CL:0000542!1.55e-14!53;CL:0000051!1.55e-14!53;CL:0000838!1.70e-14!52;CL:0000134!2.24e-12!358;CL:0002320!6.26e-12!365;CL:0000219!1.74e-10!390;CL:0000791!9.70e-08!18;CL:0000789!9.70e-08!18;CL:0002420!9.70e-08!18;CL:0002419!9.70e-08!18;CL:0000790!9.70e-08!18;CL:0000945!1.22e-07!24;CL:0000826!1.22e-07!24;CL:0000084!6.68e-07!25;CL:0000827!6.68e-07!25;CL:0002393!8.76e-07!9;CL:0002397!8.76e-07!9;CL:0000048!9.91e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.04e-19;33!CL:0002057;2.04e-19;33!CL:0000473;4.10e-18;39!CL:0000234;4.10e-18;39!CL:0000576;2.31e-17;48!CL:0000766;2.09e-15;69!CL:0002087;6.58e-13;104!CL:0000738;5.88e-12;136!CL:0000763;2.62e-09;100!CL:0000988;1.95e-08;177!CL:0000542;2.38e-08;53!CL:0000791;1.06e-07;18!CL:0000789;1.06e-07;18!CL:0002419;1.06e-07;18!CL:0000945;1.65e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.64e-53,136;CL:0000037,2.97e-48,168;CL:0002032,1.04e-45,161;CL:0000837,1.04e-45,161;CL:0002087,4.91e-45,115;CL:0000988,9.95e-44,177;CL:0002031,6.07e-42,120;CL:0000766,2.69e-34,72;CL:0000557,7.36e-30,67;CL:0000763,3.68e-29,108;CL:0000049,3.68e-29,108;CL:0002009,1.20e-28,61;CL:0002194,1.63e-28,59;CL:0000576,1.63e-28,59;CL:0000040,1.63e-28,59;CL:0000559,1.63e-28,59;CL:0000473,9.45e-28,48;CL:0000234,9.45e-28,48;CL:0000839,1.29e-26,66;CL:0000860,8.56e-26,42;CL:0002057,8.56e-26,42;CL:0000542,1.31e-14,53;CL:0000051,1.31e-14,53;CL:0000838,1.44e-14,52;CL:0000134,3.94e-12,354;CL:0002320,1.10e-11,361;CL:0000219,3.26e-10,386;CL:0000791,8.97e-08,18;CL:0000789,8.97e-08,18;CL:0002420,8.97e-08,18;CL:0002419,8.97e-08,18;CL:0000790,8.97e-08,18;CL:0000945,1.13e-07,24;CL:0000826,1.13e-07,24;CL:0000084,6.24e-07,25;CL:0000827,6.24e-07,25;CL:0002393,8.20e-07,9;CL:0002397,8.20e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.83e-19;42!CL:0000049;3.17e-09;108!CL:0000051;2.38e-08;53!CL:0000790;1.06e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.55e-31!102;UBERON:0003061!1.55e-31!102;UBERON:0002193!8.37e-29!112;UBERON:0002371!7.29e-25!80;UBERON:0001474!3.02e-24!86;UBERON:0004765!2.54e-18!101;UBERON:0001434!2.54e-18!101;UBERON:0002405!1.16e-17!115;UBERON:0002384!7.30e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.20e-32,98;UBERON:0003061,6.20e-32,98;UBERON:0002193,7.56e-29,108;UBERON:0002371,2.89e-25,76;UBERON:0001474,1.21e-24,82;UBERON:0002405,2.48e-24,93;UBERON:0004765,5.61e-21,90;UBERON:0001434,1.50e-17,100;UBERON:0002384,1.03e-10,371 | |||
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| |||
|short_description=p2@USP3 | |||
}} |
Latest revision as of 12:41, 18 September 2015
Short description: | p2@USP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_USP3_5end |
Coexpression cluster: | C1308_CD14_CD4_Basophils_Peripheral_Neutrophils_Eosinophils_CD8 |
Association with transcript: | 0bp_to_ENST00000559873_5end |
EntrezGene: | USP3 |
HGNC: | 12626 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.20e-32 | 98 |
blood island | 6.20e-32 | 98 |
hemolymphoid system | 7.56e-29 | 108 |
bone marrow | 2.89e-25 | 76 |
bone element | 1.21e-24 | 82 |
immune system | 2.48e-24 | 93 |
skeletal element | 5.61e-21 | 90 |
skeletal system | 1.50e-17 | 100 |
connective tissue | 1.03e-10 | 371 |