FFCP PHASE1:Hg19::chr15:50944522..50944526,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:50944522..50944526,- | |||
|description=CAGE_peak_at_chr15:50944522..50944526,- | |||
|id=chr15:50944522..50944526,- | |||
|ontology_enrichment_celltype=CL:0002087!5.32e-09!119;CL:0000037!2.60e-08!172;CL:0000566!2.60e-08!172;CL:0000988!5.11e-08!182;CL:0002032!5.35e-08!165;CL:0000837!5.35e-08!165;CL:0002031!5.68e-08!124;CL:0000542!2.69e-07!53;CL:0000051!2.69e-07!53;CL:0000738!4.94e-07!140;CL:0000838!6.28e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000226;1.68e-12;3!CL:0000623;1.68e-12;3!CL:0000842;1.68e-12;3!CL:0000791;4.07e-12;18!CL:0000789;4.07e-12;18!CL:0002419;4.07e-12;18!CL:0000511;5.29e-10;1!CL:0002625;5.29e-10;1!CL:0000216;5.29e-10;1!CL:0000084;1.12e-08;25!CL:0000542;6.27e-08;53!CL:0000625;9.67e-08;11!CL:0000624;8.14e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.41e-12,3;CL:0000825,1.41e-12,3;CL:0000226,2.25e-12,3;CL:0000842,2.25e-12,3;CL:0000838,2.39e-12,52;CL:0000791,3.55e-12,18;CL:0000789,3.55e-12,18;CL:0002420,3.55e-12,18;CL:0002419,3.55e-12,18;CL:0000790,3.55e-12,18;CL:0000542,4.33e-12,53;CL:0000051,4.33e-12,53;CL:0000511,3.40e-10,1;CL:0002625,3.40e-10,1;CL:0000216,3.40e-10,1;CL:0002087,8.66e-09,115;CL:0000084,1.01e-08,25;CL:0000827,1.01e-08,25;CL:0000625,8.04e-08,11;CL:0000738,3.88e-07,136;CL:0000624,8.64e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;4.07e-12;18!UBERON:0000358;1.64e-10;1!CL:0000051;6.27e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.70e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.97e-10;1!UBERON:0006518;1.97e-10;1!UBERON:0008949;1.97e-10;1!UBERON:0000101;1.97e-10;1!UBERON:0002167;1.97e-10;1!UBERON:0005795;5.29e-10;1!UBERON:0002134;5.29e-10;1!UBERON:0001136;5.29e-10;1!UBERON:0001343;5.29e-10;1!UBERON:0005208;5.29e-10;1!UBERON:0004910;5.29e-10;1!UBERON:0004145;5.29e-10;1!UBERON:0005946;5.29e-10;1!UBERON:0004813;5.29e-10;1!UBERON:0005965;5.29e-10;1!UBERON:0002078;5.29e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.80e-10,1;UBERON:0006518,1.80e-10,1;UBERON:0008949,1.80e-10,1;UBERON:0000101,1.80e-10,1;UBERON:0002167,1.80e-10,1;UBERON:0001136,3.40e-10,1;UBERON:0001343,3.40e-10,1;UBERON:0004910,3.40e-10,1;UBERON:0005154,3.40e-10,1;UBERON:0005295,3.40e-10,1;UBERON:0004813,3.40e-10,1;UBERON:0005297,3.40e-10,1;UBERON:0005294,3.40e-10,1;UBERON:0010141,3.40e-10,1;UBERON:0005891,3.40e-10,1;UBERON:0002134,4.44e-10,1;UBERON:0005208,4.44e-10,1;UBERON:0005946,4.44e-10,1;UBERON:0005965,4.44e-10,1;UBERON:0002078,4.44e-10,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0.61130724598361,0.328402357799783,0.393553906568396,0,0,0,0,0.30120591877825,0,0.154934401160603,0.142169232487422,0,0,0.802177789880567,0.868043482863407,0.447830948479849,0.32389366601898,0.77272670290256,0.581592955118259,0,0.242584061187816,0.929716147622738,0,0.309706370895104,0.575384784644301,0.256160706529101,0,0,0,0,0.564727018627814,0.272906150057846,0,0,0.320929027076094,0,0,0.398927315243264,0,0,0,0.622822248995575,0.251248665256743,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0.112328631146495,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0.400395987036012,0.574752439954483,0,0,1.1384259382189,0.587237189370939,1.91136614062614,0,0,0.263384084775077,1.37696839079683,2.35806457649499,0.822405995998037,0,0.977766799900771,0.473447805734733,0,0,0.294605907474837,0.221533894583621,0,0.128091319725675,0.260118695119756,0.657751618414705,0.276350017785848,0.289803085735052,0.593146252648242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41124720257313,1.87208137048455,2.89648807765598,0,0,0,1.44575660953827,0,0,0,0.486634870302636,0,0,0.087834785693126,0.327447688744282,0.364295288292542,0,0.649094787309367,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0.208994966536811,0.516833518338658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0.368502951935304,0,0,0.247266929278557,0,0,0.336672227908132,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0.675105328965065,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0.288732895522148,0,0.190254152234598,0.790204397959275,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0.176096868026452,0.621984346622316,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0.560425719967636,0.985153801009636,1.94064817373566,1.15508732651774,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,1.03384013061444,1.50999940573032,0.533637789017222,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0.261435451024901,0,0,0.325378394664303,0.309123034943167,0.183138929636687,0.165018999841176,0,0.650060246036521,1.6068392984416,0,0,0,0.413509717453592,0,0,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0,0,0,0.411362273086194,0,0,0,0,0,0,0.371606350251437,0.144269212976445,0.213425530045242,0,0,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0.313359791546046,0,0,0.1605880751037,0.605399121573143,0.425846237690326,0.343505344755765,0.614481528616916,0,0,0,0,0,0,0.99921590399346,1.4098700508785,0.18714054040822,0.293016358543788,0.242721043499027,0.111443384277478,0.284136146806413,0,0,0,0,0,0.222617410045812,0.16480387422676,0.422250816255987,0.996239941255349,0,0,0.102268682502155,0.369254416383208,0,0,0.179021174675609,0.511572370226872,0.197286811273867,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0.1137934482855,0.254253650292766,0,0.689486746482929,0.291604613383254,0,0,0.241192877250816,0,0.221158519862449,0.591095237907095,0,0,0.139423744278603,0.384751292518985,0,0.69169171316418,0,0,0,0.0915975934018623,0,0,0,0.332423363800313,0.225595660617181,0,0,0.189753732724185,0.158936578980379,0,0.163232808159148,0.141353071433941,0,0.995261931078505,0.265372693510018,0,0,0.123563938946503,0.522109747527277,0.134802265961354,0,0,0,0,0.242780379534093,0,1.20990716048664,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0.0967563312890851,0,0,0.0969890164884194,0.176512253383001,0.225980740780532,0.548167698587004,0.19871461170299,0,0.586654148204409,0,0.213452994739353,0,0,0.343609788497747,0,0.14405479798815,0.124252535565433,0,0,0.104602846312333,0,0.577901179803038,0,0.273810757783986,0,0,0.262887354279314,0.279282401272254,0,1.43574604915363,0.399358000997982,1.28767814440971,0.446342914883745,0.470284307407084,0,0,0.157566364614447,0.0824158583811665,0.202210631562555,0.0984274815147488,0.0846733320657845,0,0,0,0.137539436597234,0,0,0,0.182248669974074,0,0.315222829196793,0.314727528809989,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0.164185041498678,0.340776043570843,0.226624183040251,0,0,0.129282956361551,0,0.171086837884329,0,0.320362237703084,0.157204305099666,2.89967338743037,0.992332043623902,0.790446527591777,0.121792598380896,0,0,0,0.306345576763462,0,0.15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| |||
|short_description=p@chr15:50944522..50944526,- | |||
}} |
Latest revision as of 02:17, 25 July 2015
Short description: | p@chr15:50944522..50944526, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:50944522..50944526, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.41e-12 | 3 |
pro-NK cell | 1.41e-12 | 3 |
single nucleate cell | 2.25e-12 | 3 |
mononuclear cell | 2.25e-12 | 3 |
lymphoid lineage restricted progenitor cell | 2.39e-12 | 52 |
mature alpha-beta T cell | 3.55e-12 | 18 |
alpha-beta T cell | 3.55e-12 | 18 |
immature T cell | 3.55e-12 | 18 |
mature T cell | 3.55e-12 | 18 |
immature alpha-beta T cell | 3.55e-12 | 18 |
lymphocyte | 4.33e-12 | 53 |
common lymphoid progenitor | 4.33e-12 | 53 |
androgen binding protein secreting cell | 3.40e-10 | 1 |
seminiferous tubule epithelial cell | 3.40e-10 | 1 |
Sertoli cell | 3.40e-10 | 1 |
nongranular leukocyte | 8.66e-09 | 115 |
T cell | 1.01e-08 | 25 |
pro-T cell | 1.01e-08 | 25 |
CD8-positive, alpha-beta T cell | 8.04e-08 | 11 |
leukocyte | 3.88e-07 | 136 |
CD4-positive, alpha-beta T cell | 8.64e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.80e-10 | 1 |
right lung lobe | 1.80e-10 | 1 |
lower lobe of lung | 1.80e-10 | 1 |
lobe of lung | 1.80e-10 | 1 |
right lung | 1.80e-10 | 1 |
mesothelium | 3.40e-10 | 1 |
seminiferous tubule of testis | 3.40e-10 | 1 |
epithelium of male gonad | 3.40e-10 | 1 |
epithelial cord | 3.40e-10 | 1 |
sex cord | 3.40e-10 | 1 |
seminiferous tubule epithelium | 3.40e-10 | 1 |
testis sex cord | 3.40e-10 | 1 |
genital ridge | 3.40e-10 | 1 |
primitive sex cord of indifferent gonad | 3.40e-10 | 1 |
coelomic epithelium | 3.40e-10 | 1 |
tricuspid valve | 4.44e-10 | 1 |
right atrium valve | 4.44e-10 | 1 |
outflow tract of atrium | 4.44e-10 | 1 |
outflow part of right atrium | 4.44e-10 | 1 |
right cardiac atrium | 4.44e-10 | 1 |