FFCP PHASE1:Hg19::chr8:22548472..22548496,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:22548472..22548496,-
|short_description=p@chr8:22548472..22548496,-
|description=CAGE_peak_at_chr8:22548472..22548496,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:22548472..22548496,- | |||
|coexpression_cluster_id=C4481 | |||
|description=CAGE_peak_at_chr8:22548472..22548496,- | |||
|id=chr8:22548472..22548496,- | |||
|ontology_enrichment_celltype=CL:0002057!1.22e-18!42;CL:0000766!6.85e-17!76;CL:0000860!1.29e-16!45;CL:0000557!1.87e-14!71;CL:0000839!7.12e-13!70;CL:0002009!2.42e-11!65;CL:0000763!7.45e-11!112;CL:0000049!7.45e-11!112;CL:0002194!3.18e-10!63;CL:0000576!3.18e-10!63;CL:0000040!3.18e-10!63;CL:0000559!3.18e-10!63;CL:0000738!3.19e-10!140;CL:0002031!5.33e-08!124;CL:0002032!1.81e-07!165;CL:0000837!1.81e-07!165;CL:0000988!2.83e-07!182;CL:0000037!2.90e-07!172;CL:0000566!2.90e-07!172;CL:0002274!7.30e-07!5;CL:0000457!7.30e-07!5;CL:0002191!7.30e-07!5;CL:0000097!7.30e-07!5;CL:0000831!7.30e-07!5;CL:0002028!7.30e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.60e-38;33!CL:0002057;1.60e-38;33!CL:0000473;2.26e-32;39!CL:0000234;2.26e-32;39!CL:0000576;1.78e-17;48!CL:0000766;3.03e-17;69!CL:0000097;1.52e-15;5!CL:0000771;1.34e-10;2!CL:0000763;6.59e-10;100!CL:0000094;1.29e-09;8!CL:0000163;1.15e-08;9!CL:0000775;4.07e-07;3!CL:0000081;5.28e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.80e-40,72;CL:0000557,5.38e-34,67;CL:0000860,9.57e-32,42;CL:0002057,9.57e-32,42;CL:0000839,2.08e-31,66;CL:0000473,1.55e-30,48;CL:0000234,1.55e-30,48;CL:0000763,2.73e-27,108;CL:0000049,2.73e-27,108;CL:0002009,2.07e-25,61;CL:0002194,1.58e-23,59;CL:0000576,1.58e-23,59;CL:0000040,1.58e-23,59;CL:0000559,1.58e-23,59;CL:0000738,2.17e-20,136;CL:0002031,1.25e-16,120;CL:0002032,2.98e-16,161;CL:0000837,2.98e-16,161;CL:0000097,2.22e-15,5;CL:0002028,2.22e-15,5;CL:0000037,2.58e-15,168;CL:0000988,3.22e-14,177;CL:0000771,9.87e-11,2;CL:0002087,4.59e-10,115;CL:0000094,1.10e-09,8;CL:0000163,1.41e-08,9;CL:0000775,4.01e-07,3;CL:0000081,4.73e-07,11;CL:0000134,4.86e-07,354;CL:0002320,9.08e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.61e-25;42!CL:0000049;1.69e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.45e-13!80;UBERON:0002390!1.60e-12!102;UBERON:0003061!1.60e-12!102;UBERON:0001474!1.80e-12!86;UBERON:0002619!1.84e-12!22;UBERON:0001869!2.16e-12!32;UBERON:0001893!3.15e-11!34;UBERON:0002780!5.10e-11!41;UBERON:0001890!5.10e-11!41;UBERON:0006240!5.10e-11!41;UBERON:0001950!5.62e-11!20;UBERON:0002193!8.60e-11!112;UBERON:0002791!9.21e-11!33;UBERON:0004765!1.07e-10!101;UBERON:0001434!1.07e-10!101;UBERON:0003080!1.46e-10!42;UBERON:0000956!2.71e-10!25;UBERON:0000203!2.71e-10!25;UBERON:0002020!3.05e-10!34;UBERON:0003528!3.05e-10!34;UBERON:0007023!1.74e-07!115;UBERON:0002405!2.73e-07!115;UBERON:0001017!2.97e-07!82;UBERON:0001049!5.00e-07!57;UBERON:0005068!5.00e-07!57;UBERON:0006241!5.00e-07!57;UBERON:0007135!5.00e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.35e-29,76;UBERON:0001474,8.00e-27,82;UBERON:0004765,5.75e-24,90;UBERON:0001434,4.39e-23,100;UBERON:0002405,5.07e-23,93;UBERON:0002390,1.42e-21,98;UBERON:0003061,1.42e-21,98;UBERON:0002193,4.45e-19,108;UBERON:0002204,1.41e-11,167;UBERON:0003081,1.14e-07,203 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.246301768349837,0.157421562627358,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0.145398238779565,0,1.21292030593908,1.16214518452842,0.822335776043652,3.40677007984614,3.16461631554365,2.56160706529101,1.6553756092201,2.75796544589295,2.5819387343353,8.12558919566051,1.50593871634084,0.272906150057846,1.79778787556068,3.36692281607993,0.962787081228281,3.19668562899521,0,0.199463657621632,0.852449501065388,2.32167390902867,0.56738522469114,0.622822248995575,3.76872997885115,4.17186334736161,2.38907729175628,1.21079900526674,0.368277635987565,0.949387162322653,0.633765858935825,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0.196709770113833,0.786021525498329,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0.795285947051099,0.973269740605272,0.189069634328136,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.427114777637135,0,0,0.103052529238439,0.772921620136887,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,0.858486162094873,0,0,0,0,0,0,0,0,0,13.7945706610864,1.14462964217194,5.80518723514162,0.864719720501769,2.27236380167484,0.126995788584338,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0.128343036279748,0.254094624222463,0,0.773288812777695,0.167516265334349,0,3.74503511973591,0,1.24324654030811,0,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,1.32845119707087,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0.280660094433074,0,0,0,0,1.07946785661859,0.532685175939381,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.462145851343933,0.767518373630648,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32218398827431,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0.844016498463076,0.111308705022906,0,1.90012867315194,0.19924798825107,0.828851746593443,0,0.20453736500431,0.369254416383208,0,0,0,0,0,0,0,2.90799823828566,0.649376687132959,0,0.520855522170466,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0,0,0.87754158861589,0,0.697118721393016,0.0769502585037971,0,0,0,0,0,0,1.5991043280559,0,0.156980256395025,0,0,0,0.167821586975843,0,0.158936578980379,0,0.326465616318295,0,0,0,0.0884575645033392,0,0.889563386041866,0.247127877893006,0.417687798021821,0,0,0.702793337176017,0,0,0,0,0,0.61214552326098,0.063186579628488,0.60129367765797,0,0,0,0,0,0,0,0.347119476670262,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0.176512253383001,0,0,0,0.316553979779393,0.195551382734803,0,0,0.39961921916426,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,1.59045937961861,0.272406812223151,0,0,0.415440338029185,0.2249738915515,6.1904156364636,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,1.24271716604159,0.992332043623902,0,0,0.638341257770182,0,0,0,0,0,0.886068179966986,2.68457782784319,0.751145584238999,0,0,0.0620964029413835,0.138348634936231,0,0.909894705249887,2.56918800190471,0,0,0,0.597019211547496,0,0,0.189403005275089,0.251567901752575,0,0,0.302461847526478,0.466311601748341,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,1.03018711554838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0.850299680406731,0.123935764259002,0,0,0,0,0.705351887381368,0,0.513833800771676,0,0,2.2562800066483,0.504143392443436,0.207471757392654,0.484426936895553,0,0,0.235939446695481,0,0.462102664601353,0,0,0,0.300841313397029,0,0,0,0.163771917510097,0.443568258651136,0.202612753855184,0.781078098613847,1.03343398250592,0.317079050969534,0.546974809018219,0,0,0,0,1.60710550763486,0,0,0,0.0887023701626388,0,0,0,0.460409414939944,0,0,0,0.942693539496011,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0.691259661814092,0,0.236664001461131,0.0852134047591577,0,0,0,0,0.671132590786754,0,0.121917924982269,0,0,0,0.485710993059139,0.233939463462106,0.994753875806841,0.237840181555137,0,0,0,0.0771741581079447,0.218559560503957,0.470317296361523,0,0,0,0,0.8453114551668,0,0,0.0644578879735772,0,0,0.352894871715692,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| ||
|short_description=p@chr8:22548472..22548496,- | |||
}} | }} |
Latest revision as of 17:00, 31 July 2015
Short description: | p@chr8:22548472..22548496, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:22548472..22548496, - |
Coexpression cluster: | C4481_Mast_CD14_immature_Neutrophils_melanoma_medial_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.80e-40 | 72 |
granulocyte monocyte progenitor cell | 5.38e-34 | 67 |
classical monocyte | 9.57e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.57e-32 | 42 |
myeloid lineage restricted progenitor cell | 2.08e-31 | 66 |
defensive cell | 1.55e-30 | 48 |
phagocyte | 1.55e-30 | 48 |
myeloid cell | 2.73e-27 | 108 |
common myeloid progenitor | 2.73e-27 | 108 |
macrophage dendritic cell progenitor | 2.07e-25 | 61 |
monopoietic cell | 1.58e-23 | 59 |
monocyte | 1.58e-23 | 59 |
monoblast | 1.58e-23 | 59 |
promonocyte | 1.58e-23 | 59 |
leukocyte | 2.17e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 1.25e-16 | 120 |
hematopoietic oligopotent progenitor cell | 2.98e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.98e-16 | 161 |
mast cell | 2.22e-15 | 5 |
basophil mast progenitor cell | 2.22e-15 | 5 |
hematopoietic stem cell | 2.58e-15 | 168 |
hematopoietic cell | 3.22e-14 | 177 |
eosinophil | 9.87e-11 | 2 |
nongranular leukocyte | 4.59e-10 | 115 |
granulocyte | 1.10e-09 | 8 |
endocrine cell | 1.41e-08 | 9 |
neutrophil | 4.01e-07 | 3 |
blood cell | 4.73e-07 | 11 |
mesenchymal cell | 4.86e-07 | 354 |
connective tissue cell | 9.08e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.35e-29 | 76 |
bone element | 8.00e-27 | 82 |
skeletal element | 5.75e-24 | 90 |
skeletal system | 4.39e-23 | 100 |
immune system | 5.07e-23 | 93 |
hematopoietic system | 1.42e-21 | 98 |
blood island | 1.42e-21 | 98 |
hemolymphoid system | 4.45e-19 | 108 |
musculoskeletal system | 1.41e-11 | 167 |
lateral plate mesoderm | 1.14e-07 | 203 |