FFCP PHASE1:Hg19::chr15:42185023..42185031,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100289090 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=32bp_to_ENST00000309874,uc010bcp.1_5end | |||
|cluster_id=chr15:42185023..42185031,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_3_at_LOC100289090_5end | |||
|id=chr15:42185023..42185031,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.41e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.19e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.92e-26;1!UBERON:0010226;5.92e-26;1!UBERON:0005062;8.13e-26;4!UBERON:0007284;8.13e-26;4!UBERON:0010227;1.26e-25;1 | |||
|ontology_enrichment_disease=DOID:114!1.40e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:114;6.85e-14;2!DOID:3493;1.07e-13;2!DOID:1287;1.36e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.30e-14,2;DOID:3493,8.28e-14,2;DOID:1287,1.40e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.17e-16!115;UBERON:0003978!5.35e-15!3;UBERON:0009751!5.35e-15!3;UBERON:0000946!5.35e-15!3;UBERON:0002523!5.35e-15!3;UBERON:0005983!5.35e-15!3;UBERON:0002165!5.35e-15!3;UBERON:0002062!5.35e-15!3;UBERON:0007280!5.35e-15!3;UBERON:0004151!7.05e-15!3;UBERON:0007100!1.71e-12!27;UBERON:0002133!1.46e-10!2;UBERON:0002081!2.02e-10!2;UBERON:0003103!2.26e-08!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.28e-35;25!UBERON:0003978;5.06e-34;3!UBERON:0000946;5.06e-34;3!UBERON:0004151;1.50e-33;3!UBERON:0002135;2.45e-26;1!UBERON:0002084;5.92e-26;1!UBERON:0002146;5.92e-26;1!UBERON:0002082;5.92e-26;1!UBERON:0005623;5.92e-26;1!UBERON:0002079;1.26e-25;1!UBERON:0000948;2.04e-18;22!UBERON:0002133;6.85e-14;2!UBERON:0002081;1.55e-13;2!UBERON:0010313;5.83e-11;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,4.66e-34,3;UBERON:0009751,4.66e-34,3;UBERON:0000946,4.66e-34,3;UBERON:0002523,4.66e-34,3;UBERON:0005983,4.66e-34,3;UBERON:0002165,4.66e-34,3;UBERON:0002062,4.66e-34,3;UBERON:0007280,4.66e-34,3;UBERON:0004151,1.27e-33,3;UBERON:0007100,5.24e-33,27;UBERON:0002135,2.16e-26,1;UBERON:0002084,4.61e-26,1;UBERON:0002082,4.61e-26,1;UBERON:0010226,4.61e-26,1;UBERON:0002146,5.93e-26,1;UBERON:0005623,5.93e-26,1;UBERON:0002079,1.26e-25,1;UBERON:0000948,5.92e-17,24;UBERON:0005498,5.92e-17,24;UBERON:0004140,5.92e-17,24;UBERON:0009881,5.92e-17,24;UBERON:0004141,5.92e-17,24;UBERON:0003084,5.92e-17,24;UBERON:0007005,5.92e-17,24;UBERON:0004139,5.92e-17,24;UBERON:0004291,5.92e-17,24;UBERON:0004797,3.06e-15,7;UBERON:0002133,6.43e-14,2;UBERON:0002081,1.55e-13,2;UBERON:0010227,1.55e-13,2;UBERON:0003103,3.07e-13,68;UBERON:0010313,5.69e-11,10;UBERON:0002342,5.69e-11,10;UBERON:0005062,5.69e-11,10;UBERON:0001009,4.62e-08,112;UBERON:0007023,6.40e-08,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0.318565414324097,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0.663475559587348,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,3.35138881526705,2.52076466412852,0.717873024576814,0.998395002494955,3.004582336956,2.4548860318606,0.134366944973453,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.394028536495991,0.104909176269996,0,0,0,1.42939065274673,2.64836788146173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0.430227358820278,0,0,0,0,0,0,0,2.65005630761156,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190941474834495,0.202117188958219,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p3@LOC100289090 | |||
}} |
Latest revision as of 15:13, 17 September 2015
Short description: | p3@LOC100289090 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC100289090_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 32bp_to_ENST00000309874, uc010bcp.1_5end |
EntrezGene: | LOC100289090 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.19e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
valve | 4.66e-34 | 3 |
cardiac mesenchyme | 4.66e-34 | 3 |
cardial valve | 4.66e-34 | 3 |
tunica intima | 4.66e-34 | 3 |
heart layer | 4.66e-34 | 3 |
endocardium | 4.66e-34 | 3 |
endocardial cushion | 4.66e-34 | 3 |
presumptive endocardium | 4.66e-34 | 3 |
cardiac chamber | 1.27e-33 | 3 |
primary circulatory organ | 5.24e-33 | 27 |
mitral valve | 2.16e-26 | 1 |
heart left ventricle | 4.61e-26 | 1 |
cardiac ventricle | 4.61e-26 | 1 |
future cardiac ventricle | 4.61e-26 | 1 |
pulmonary valve | 5.93e-26 | 1 |
semi-lunar valve | 5.93e-26 | 1 |
left cardiac atrium | 1.26e-25 | 1 |
heart | 5.92e-17 | 24 |
primitive heart tube | 5.92e-17 | 24 |
primary heart field | 5.92e-17 | 24 |
anterior lateral plate mesoderm | 5.92e-17 | 24 |
heart tube | 5.92e-17 | 24 |
heart primordium | 5.92e-17 | 24 |
cardiac mesoderm | 5.92e-17 | 24 |
cardiogenic plate | 5.92e-17 | 24 |
heart rudiment | 5.92e-17 | 24 |
blood vessel layer | 3.06e-15 | 7 |
atrioventricular valve | 6.43e-14 | 2 |
cardiac atrium | 1.55e-13 | 2 |
future cardiac atrium | 1.55e-13 | 2 |
compound organ | 3.07e-13 | 68 |
neural crest-derived structure | 5.69e-11 | 10 |
neural crest | 5.69e-11 | 10 |
neural fold | 5.69e-11 | 10 |
circulatory system | 4.62e-08 | 112 |
adult organism | 6.40e-08 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.30e-14 | 2 |
signet ring cell adenocarcinoma | 8.28e-14 | 2 |
cardiovascular system disease | 1.40e-07 | 4 |