FFCP PHASE1:Hg19::chr15:35086926..35086948,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=70 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=143 | |||
|TSSclassifier=strong | |||
|UniProt=P68032 | |||
|association_with_transcript=60bp_to_AB590199,CR541795,CU679551,DQ893096,DQ896369_5end | |||
|cluster_id=chr15:35086926..35086948,- | |||
|coexpression_cluster_id=C352 | |||
|description=CAGE_peak_4_at_ACTC1_5end | |||
|id=chr15:35086926..35086948,- | |||
|ontology_enrichment_celltype=CL:0000188!2.96e-15!9;CL:0000594!2.11e-07!3;CL:0002580!3.56e-07!3;CL:0002579!9.84e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000680;3.15e-17;7!CL:0000515;3.87e-15;3!CL:0000188;2.65e-13;9!CL:0000056;1.76e-11;4!CL:0000594;1.75e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,3.26e-13,9;CL:0000515,1.42e-11,4;CL:0000594,1.87e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;4.41e-12;4!UBERON:0007284;4.41e-12;4!CL:0000515;1.76e-11;4!UBERON:0006965;3.98e-10;2!UBERON:0006603;3.91e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;2.52e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.59e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0004151!1.73e-08!3;UBERON:0003978!2.04e-08!3;UBERON:0009751!2.04e-08!3;UBERON:0000946!2.04e-08!3;UBERON:0002523!2.04e-08!3;UBERON:0005983!2.04e-08!3;UBERON:0002165!2.04e-08!3;UBERON:0002062!2.04e-08!3;UBERON:0007280!2.04e-08!3;UBERON:0006947!2.68e-07!3;UBERON:0004054!2.68e-07!3;UBERON:0007023!4.00e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;2.10e-28;16!UBERON:0002036;2.10e-28;16!UBERON:0002385;2.09e-16;31!UBERON:0001015;2.09e-16;31!UBERON:0000383;2.09e-16;31!UBERON:0004151;4.33e-16;3!UBERON:0003978;5.99e-16;3!UBERON:0000946;5.99e-16;3!UBERON:0007100;4.95e-15;25!UBERON:0002081;3.01e-11;2!UBERON:0002133;3.67e-11;2!UBERON:0000341;8.11e-11;2!UBERON:0000948;8.34e-08;22!UBERON:0006947;4.98e-07;3!UBERON:0004054;4.98e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,4.23e-16,3;UBERON:0003978,6.00e-16,3;UBERON:0009751,6.00e-16,3;UBERON:0000946,6.00e-16,3;UBERON:0002523,6.00e-16,3;UBERON:0005983,6.00e-16,3;UBERON:0002165,6.00e-16,3;UBERON:0002062,6.00e-16,3;UBERON:0007280,6.00e-16,3;UBERON:0007100,8.55e-14,27;UBERON:0002081,3.01e-11,2;UBERON:0010227,3.01e-11,2;UBERON:0002133,3.68e-11,2;UBERON:0003103,3.94e-11,68;UBERON:0000341,6.67e-11,2;UBERON:0007023,1.17e-09,114;UBERON:0000948,4.22e-07,24;UBERON:0005498,4.22e-07,24;UBERON:0004140,4.22e-07,24;UBERON:0009881,4.22e-07,24;UBERON:0004141,4.22e-07,24;UBERON:0003084,4.22e-07,24;UBERON:0007005,4.22e-07,24;UBERON:0004139,4.22e-07,24;UBERON:0004291,4.22e-07,24;UBERON:0004797,4.45e-07,7;UBERON:0002385,5.25e-07,64;UBERON:0001015,5.25e-07,64;UBERON:0000383,5.25e-07,64;UBERON:0006947,5.83e-07,3;UBERON:0004054,5.83e-07,3 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.89694817844431,0,0,0,0,0.257640540045629,0,0.506328996723799,2.92311015483596,0.252433774244115,0.0920498986422993,0,1.42003837006646,2.31729825923573,0.339121184620975,0,0,0,0.121973706129595,0,0.348581828608555,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,1.40241773803446,0,5.88034845542168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75084482668401,2.67119219315498,2.68591444859843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0.195801157462741,7.89229874764969,0,0,0,0,0,0,0.248107807818777,0.767309866440312,1.40330047216537,0.128139149255701,1.02341449813341,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,0,1.06337790121334,0.616194468458578,0.767518373630648,2.61889487720608,0.107420244868274,2.32026710262766,3.83519823372454,4.71869788927708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.593929361665277,0,0,0,0,0,0,1.39473591775749,0,0,0,0,0,0,0,0,1.7755813014648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,1.18375320854817,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,2.25980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6848376623405,10.0830586565141,3.58936512288407,8.38651802095763,17.1690419254628,9.81954412744239,6.9198976661328,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0,0,0,0,0,0,0,38.5935476241618,17.2143912295012,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.2042479934625,0,0.336749488765919,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02041020705668,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,1.94228651156368,0.410651227424988,34.794432940146,0.485710993059139,0,0,0,0,0,0,0,0,0,2.45148321753905,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,2.98527574661373,3.57096647195611,0,0,0,0,0,1.30630048738177,0.684466602170562,0,0,2.66128285236811,0,0,0,0,0,0,0.406896178315738,0,1.61019034872821,0 | |||
|short_description=p4@ACTC1 | |||
}} |
Latest revision as of 07:30, 17 September 2015
Short description: | p4@ACTC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ACTC1_5end |
Coexpression cluster: | C352_heart_mesenchymal_Skeletal_Pericytes_left_skeletal_Myoblast |
Association with transcript: | 60bp_to_AB590199, CR541795, CU679551, DQ893096, DQ896369_5end |
EntrezGene: | ACTC1 |
HGNC: | 143 |
UniProt: | P68032 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 3.26e-13 | 9 |
skeletal muscle myoblast | 1.42e-11 | 4 |
skeletal muscle satellite cell | 1.87e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 4.23e-16 | 3 |
valve | 6.00e-16 | 3 |
cardiac mesenchyme | 6.00e-16 | 3 |
cardial valve | 6.00e-16 | 3 |
tunica intima | 6.00e-16 | 3 |
heart layer | 6.00e-16 | 3 |
endocardium | 6.00e-16 | 3 |
endocardial cushion | 6.00e-16 | 3 |
presumptive endocardium | 6.00e-16 | 3 |
primary circulatory organ | 8.55e-14 | 27 |
cardiac atrium | 3.01e-11 | 2 |
future cardiac atrium | 3.01e-11 | 2 |
atrioventricular valve | 3.68e-11 | 2 |
compound organ | 3.94e-11 | 68 |
throat | 6.67e-11 | 2 |
adult organism | 1.17e-09 | 114 |
heart | 4.22e-07 | 24 |
primitive heart tube | 4.22e-07 | 24 |
primary heart field | 4.22e-07 | 24 |
anterior lateral plate mesoderm | 4.22e-07 | 24 |
heart tube | 4.22e-07 | 24 |
heart primordium | 4.22e-07 | 24 |
cardiac mesoderm | 4.22e-07 | 24 |
cardiogenic plate | 4.22e-07 | 24 |
heart rudiment | 4.22e-07 | 24 |
blood vessel layer | 4.45e-07 | 7 |
muscle tissue | 5.25e-07 | 64 |
musculature | 5.25e-07 | 64 |
musculature of body | 5.25e-07 | 64 |
male genital duct | 5.83e-07 | 3 |
internal male genitalia | 5.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.59e-11 | 2 |