FFCP PHASE1:Hg19::chr15:29561979..29562038,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56160 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7677 | |||
|TSSclassifier=strong | |||
|UniProt=Q96MG7 | |||
|association_with_transcript=0bp_to_ENST00000332303,NM_138704,uc001zco.2_5end | |||
|cluster_id=chr15:29561979..29562038,- | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_1_at_NDNL2_5end | |||
|id=chr15:29561979..29562038,- | |||
|ontology_enrichment_celltype=CL:0000838!8.08e-16!52;CL:0000542!4.47e-15!53;CL:0000051!4.47e-15!53;CL:0000791!1.54e-11!18;CL:0000789!1.54e-11!18;CL:0002420!1.54e-11!18;CL:0002419!1.54e-11!18;CL:0000790!1.54e-11!18;CL:0000084!2.07e-08!25;CL:0000827!2.07e-08!25;CL:0000625!6.14e-08!11;CL:0000738!2.34e-07!140;CL:0000945!4.26e-07!24;CL:0000826!4.26e-07!24;CL:0000236!7.36e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.59e-11;18!CL:0000789;1.59e-11;18!CL:0002419;1.59e-11;18!CL:0000542;1.30e-08;53!CL:0000084;2.01e-08;25!CL:0000625;6.20e-08;11!CL:0000945;5.04e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.08e-16,52;CL:0000542,4.47e-15,53;CL:0000051,4.47e-15,53;CL:0000791,1.54e-11,18;CL:0000789,1.54e-11,18;CL:0002420,1.54e-11,18;CL:0002419,1.54e-11,18;CL:0000790,1.54e-11,18;CL:0000084,2.07e-08,25;CL:0000827,2.07e-08,25;CL:0000738,3.32e-08,136;CL:0000625,6.14e-08,11;CL:0002031,1.55e-07,120;CL:0002087,2.63e-07,115;CL:0000945,4.26e-07,24;CL:0000826,4.26e-07,24;CL:0000236,7.36e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;1.59e-11;18!CL:0000051;1.30e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=32.5204298894296,31.2586764880835,32.9833305584573,35.0256544235956,25.4767823823554,41.8722491568177,37.9949817252466,24.0053551902196,42.8344430247735,29.7338063166826,35.5878595665938,32.5477644473957,30.5969694745006,27.8474294160105,22.5350215494983,30.2546315903299,39.7778388495825,24.8305430731707,28.7880351286399,36.6900753068828,41.2081396313391,46.7047535002351,20.036519099174,22.3105312868801,24.2297294417969,53.8714510523056,43.4312118190213,45.4948315993066,54.2842702051488,45.2918689754711,42.8840661585531,17.4690032650996,25.301297177373,19.9667165490065,11.2327440841437,28.1495080325095,28.4792426154802,50.4135821764008,50.7377452099458,52.0826089718044,21.2719700527928,20.0814072931767,22.9242255194426,19.047169280123,23.4283085087062,22.5603176904669,19.2916100631718,31.2487594896588,18.5823822537062,26.4677000936378,29.9708026639048,22.4658118394156,25.8559260552464,28.4013260776883,12.1883837934908,18.6359916147179,24.5615535052061,16.6295378489363,26.3232147438976,30.1673285451528,23.0161365287655,18.8015241106428,26.7281301212987,24.7210355308963,27.2796684310869,43.6886623012178,29.272645702792,21.1048878815664,26.5956288394303,23.2392063834475,23.005181100068,33.881542510856,20.8865175710984,32.744569378351,36.7805438939525,38.7868494190495,31.3396880898721,29.7350247826183,22.1801309641971,40.4718096112573,39.9822521170171,42.7434119809243,65.1186104506894,49.698613624854,63.1551570243124,51.6343569305474,81.2803853683105,59.7742537552663,72.7149360063348,71.5540315901523,93.920139903059,65.7705652095451,68.426907834416,25.1125524300149,25.2228853341691,22.3876472058815,93.2404310339569,112.401078146261,110.819207960735,37.9513344536839,123.850461320764,149.136058806441,161.706184578566,43.004436357677,95.7469199293221,99.2471847734623,90.1776866337502,40.7330396727647,42.6594659996401,40.4517245325043,56.9281036638848,39.9928258314372,89.4167975867224,90.1612590662333,108.716944757176,29.9136664721575,93.5058004388688,104.462743426719,72.8696713016168,66.8987370080603,72.9213468319189,66.5316431113862,51.9484160818316,48.1229657940613,68.7118996037902,49.7232229292435,65.6902397536837,84.8764388976123,76.2204557982996,77.3362316734147,26.8187552945358,34.8764447045891,29.664114347699,20.6020316859203,34.5923158338764,41.1364113848739,40.5595832996061,49.1501219005662,28.1713755148922,25.7206101056574,29.5124879928903,36.3466934506153,34.6080523877915,25.2133421093412,24.9901493114106,21.7662171624084,25.2620124985844,28.3803842923357,32.0317150036872,19.6872475704669,20.2737655514039,36.1298529944572,29.5069426366455,28.2653970962005,26.847963917434,23.9352696487859,23.4074362521228,20.414923974377,15.6537155582153,19.0790749275862,22.5584417581122,22.0478910658369,29.7755710208767,18.7508170976393,29.1651101237433,14.7344551668732,19.5340554184768,18.8061172407148,22.9974956198825,22.7823758296351,27.8466650774219,2.63560834872127,7.75560528296651,31.3987717542625,30.8122610051097,25.9592548912389,11.9168262731897,25.2416226258956,25.5361235182817,38.6867544098192,28.8222288470203,33.7934541331509,22.7184055841829,23.1702355959863,22.5577426296573,38.4447866218126,31.1134999219199,44.2867506165876,24.0363259159347,27.953119255678,28.0963519437386,29.2411901622975,22.9859581002747,23.8766371393822,23.2735755230578,25.426703683536,31.6176890397842,45.144108576718,37.3373063210621,39.1369385633351,69.7059597561751,23.5670559535693,28.7772595705518,21.3339368922821,28.5335453572545,36.1655599042843,35.6064199608634,21.8924113498841,22.9618733681743,36.7318708767936,30.3062618658173,23.7071965906678,27.6180778359016,17.7771972631484,32.9426835706914,13.1645539148188,27.964420481264,18.6800992940645,35.6233107745698,27.3181836023792,23.7856426986132,30.6286378612026,41.5423451160695,23.5778240859222,25.0926430943568,21.2235400587863,31.8351372998244,28.0963108841549,33.6962434321603,36.0740471453489,25.9890476401897,29.5631660851422,15.6449532329816,34.0917697242229,27.6269842704961,37.1494342425583,44.7565278635143,26.8556436090446,27.9850585529649,24.5831250481152,25.2573197557182,26.5812921792736,24.4388737684429,20.494358840345,18.2485962566572,23.4695765737298,33.2169954581092,39.2676966649648,32.1027728838492,36.7521778463855,17.7457048750563,26.5363348502959,21.2684366405305,35.7585110525867,19.9241270439844,24.0194934417936,28.3155736354254,19.1082980537953,27.1428225511403,20.9249886058277,51.4777122390313,41.5973914111831,37.5261489265711,26.5480627392926,29.7043996416629,15.0141105671517,17.1304639653346,21.1182108980404,15.8040879591855,23.1791263765616,21.667096535691,14.9762729689112,25.5645599136613,32.8068418953719,24.5253907170335,23.6764412394785,21.5836039713864,27.0289562817985,26.0700221832344,38.9203957937795,30.376709734563,45.1975291878883,56.062661879198,37.872730027914,23.4942208881025,27.1211782146377,25.7878383862103,25.6608669034058,28.0719055080073,21.0240140490742,23.4377674757074,34.4242428940257,31.8250850248294,29.0419611850962,35.4204501176311,46.4953379607447,27.049688081792,38.5610269048062,29.1220823351825,29.8360554144085,35.4622830058196,30.1057062288192,32.1700485730832,48.2933228798384,22.2274890930808,15.3096006618055,33.0514512330568,26.1344118068032,24.7180289188861,32.2467379682109,26.1929236896989,31.6221829667095,31.1399396687918,31.6250909224547,33.5474797688216,37.9044388252576,25.6746429073293,28.0875734935104,31.643353672759,25.784778706545,28.693796862343,74.2805965961266,71.5883548533597,84.0646887632352,27.1881247918036,32.5349634644054,36.3445742005517,29.4828626988454,38.2763250991898,2.24702107184155,17.9496875522415,2.48649308061621,32.0224793386955,34.011595432058,29.2966225595714,29.3238914758438,28.1917802299516,32.8021023270584,29.402495163171,32.5021787705936,40.9333507300773,27.9377292489763,23.2478959487403,40.0081095735496,26.0650843404249,57.369739136583,57.3049517764129,50.6581664001074,67.0871164545898,54.2175993641497,27.8877365730559,46.6019230629392,34.1701031462539,40.4415726744606,15.9600452219585,41.818354070528,41.2608060603357,27.632191449602,33.618469519014,57.8830459135465,28.8372127410966,27.3445056982216,25.4594183642808,30.6360113218336,27.8904908303902,19.7000902834344,41.1038264121734,21.9152753667433,21.6999307031107,28.5883133770546,33.8300990595314,46.022360516556,30.8061348417659,47.8453359197882,33.61202167025,28.6044914299693,44.3560197876497,32.317804002538,25.4780781000524,60.1486285492128,48.2284658828058,51.6740467070499,31.0949053114947,26.5944322857192,29.5514676233275,14.0326321053398,17.2547397676434,24.1063117609406,38.0496989011659,41.6484345170308,21.8446944693171,17.7644761747586,16.9969569836411,26.4162147478239,16.251506150913,19.2820715812991,26.5844475303335,15.2508130943498,18.4204409671355,18.0565909954735,21.3766287287865,18.9971869027639,20.4543905798642,26.442514587081,22.313463573732,17.8736762649549,7.52915003718046,21.344291760521,37.1876439437829,30.5367976425721,25.0933417257816,24.334652833911,31.4060557887043,26.0979897622522,24.6481211408214,28.9112271218822,22.7016605309397,22.4629391550295,23.6381440465543,41.9672377750588,27.8160342222048,26.0926663299268,23.5484592059769,29.8588279588302,24.4337956465089,26.2721657230881,29.1142773465575,39.6275802932521,29.4880919367287,34.6219954753609,33.1450345898547,33.8080469621617,24.7064839648454,31.8162221895854,25.9918668226558,34.1846512998597,24.5472420839251,37.2683252465698,34.7265320560013,30.8270533461917,31.6540188061818,29.1234088213765,37.7472107393204,18.5000644343226,29.5729613449495,30.3170393759063,21.6404249083065,37.9993743535795,44.1255156566269,39.4652100716344,46.8912525128277,19.5330888832789,28.1526955725031,26.1338363667174,20.052629565454,43.9115480124654,53.9108722136402,47.890456581961,29.8640420269047,19.7904567600546,22.9391162142713,33.0395368561014,26.4437270758146,32.4976195738093,32.4236655596359,25.9215089874295,30.1387566991823,22.8603512212793,19.2495971052672,19.8482574944636,20.2525460887033,20.9190358815845,22.1251132813568,20.5659891820181,18.7604609146848,19.9165584937661,24.7658091786943,19.8019383567479,17.9710193992614,16.2046622113566,9.08743395483535,7.51903431270201,18.2835120025732,21.8399782141031,22.6015672053973,40.455392580581,7.55711758462682,17.8199643298906,17.223060307716,20.5224444305647,20.9065262080183,20.6020568682479,12.3087398947712,18.3909861363669,24.3142536638409,19.7381807122989,19.6497567428631,31.792274902001,17.1118335666814,13.038875960465,30.1184315614798,22.4419815653429,27.6177153174354,21.194088444847,34.7951676718204,21.1004124615769,81.58928078179,20.7652881525717,21.1125408127993,29.6879502494094,22.378997158023,20.1546198283421,29.6579179256249,21.9090953720704,23.0169294869738,8.3577566567014,40.4587854766877,19.951322438848,35.1170524067484,33.5276329285716,17.7819184231419,48.4666373047609,26.3461398779658,39.9227596002388,7.29197731038653,17.4919999992391,28.2749834419569,19.0035058636784,4.57656570526979,17.4926884508273,13.1002481831757,20.7039275502111,27.2591242045269,26.5722415744152,22.1897447070751,12.2065389053667,15.4810963903714,27.4859285626799,27.8619454385545,35.5139391071908,36.8078684895513,29.9336505579771,20.7374541641542,25.3620294826866,9.96309852948471,25.2061902859059,13.7170498684725,26.7464972733438,21.3213910407454,39.8553862963372,15.0701046139224,15.2914747348144,20.3036094555463,22.3511289122223,17.7890882194393,14.2315299543139,17.641960266822,16.6688470977141,15.8335823914373,10.1774211432437,28.7796890856981,20.9005005526486,22.7335940773582,23.2191455074778,34.3964509269521,20.0173581093335,21.8241874466402,28.9824871816911,24.0773294189637,34.2026090758995,23.9015773872522,21.1317788446657,14.3240423925115,33.1450898393488,16.9387002468129,42.8501866282686,22.5576089273702,30.3653307217275,22.9150902987916,32.5680397626521,24.1624127789114,22.9171030437274,10.7525186795663,13.9458677554598,18.5824061837606,13.1905401134699,19.7944642777043,18.1953741753041,28.3057202552089,23.7340724810831,16.7388453130117,26.7506900535439,19.625594235717,24.1502651056164,23.6526419533221,36.6088800064463,20.9674144709529,13.7113082075063,24.3746564430133,20.9239979526239,11.7833465769755,25.6143593687223,16.9838168144811,26.9449080078178,28.4050758491471,12.3548398460614,17.286575758578,35.039215029452,16.0271943539421,21.472864559631,20.1883493382803,16.0137201689025,12.4248753657653,22.2155506822622,16.7024562248232,29.3817152554036,33.9514698721766,87.0157142664531,25.1354161145029,27.7284113054137,14.3574604915363,23.9614800598789,32.1919536102428,29.2354609248853,22.9767475904604,21.9782928960866,9.31967596219631,13.4719241745352,13.2689531993678,14.0873406655246,26.1817100829232,25.5713462838669,23.0616610044698,22.8821722267447,22.5054407851027,20.3558366163906,20.3565765634301,59.1681334780446,39.4638996824554,29.2205367525099,31.8662953219303,21.1199295561851,28.482841357304,22.3872713421142,51.0968917098608,12.2825726284445,33.5906803395482,37.0771503404642,19.5786773994157,43.439968140297,41.4826315776609,40.4968326535667,35.9190574687462,15.8438565046224,38.8484689670762,14.2773235315358,16.4138501719452,13.2506888912221,22.1073855378251,23.8018683136842,28.7425887645673,15.5059304909668,24.2407426528667,25.6243017312455,25.6828214315261,31.2584593741529,24.3062307234471,35.9288165223643,8.93677760878255,10.33633826402,19.0524319457252,11.947477493775,10.1640515520039,14.1348686625211,24.8099090390756,24.6493055101966,21.783221942931,30.3906873715738,23.5169589258127,27.7570921147984,21.8590843199245,18.747061194316,8.79564881741557,29.6883946886766,23.7618477895153,23.4167452903441,10.4343140599794,26.8658645196373,37.1604162657087,26.0758754906228,29.5468688229139,29.1818766032987,36.482260085458,36.3855708751109,27.6752590486727,27.0460729014038,21.8825621984658,30.5849792954309,30.1368085149615,33.536798685272,16.5882483136342,30.5717971741694,34.4351740795744,31.8546131074103,32.7492482465164,25.225985458689,36.0060345221068,30.7194193141517,39.9069033495505,27.0705204315059,25.6017769384418,31.5924048768169,36.0321952979533,34.0699225217358,24.0774788009129,15.8686777617445,38.8881495028165,39.6735369646477,20.6055002148212,24.9631438596597,16.1179956973339,42.3057982610532,44.7339461140563,23.1462781189104,16.2047792147568,37.167336943676,35.1050880465487,48.0148175006366,25.5242363189001,22.3978666565804,28.2547447817113,41.3209653374559,39.5828254099143,23.2602992680953,38.3405737655802,13.9466001416694,30.3980841699493,19.7379699934161,54.7643635321394,17.5929945605719,46.5788054137157,18.0444564958083,15.5519315008243,23.0209868346573,19.5162908627994,23.9044231620963,26.7563613570434,24.7809493732877,24.6586907317952,35.8174358708516,15.6420577032508,22.8963132470461,19.3999892703083,36.0256836728461,41.26308541181,37.0557027597372,27.811254466767,25.5053837386053,19.1560630868582,30.7674546361132,25.2071696221718,37.4832308356061,27.2893841117828,17.1323304310985,28.9535769578026,16.8696704387269,20.544003034428,17.3288499225507,25.5526003963002,26.2336771902838,21.4829519885577,41.816942562187,19.767096732945,20.3193642920604,13.8810548075154,18.669998596151,21.1434203290375,32.4180406168294,15.6215619722769,22.5288608186291,28.7273620178398,28.9896648779656,30.154177177145,27.7878259898005,34.4707638944856,37.0511040154826,41.2490413626281,38.3363443329459,43.0945579008008,39.8408834864771,20.3128427672443,131.712447776256,18.3492170098038,28.683227316223,35.4515249503757,29.5484602209921,18.0194871065152,31.9466887901592,22.4675293579883,12.0517030224929,20.0894918512089,21.8086867130808,31.0538597126583,34.308741204795,17.3814972905999,20.9234565662625,16.6903941410476,31.2667432244799,29.0102629828252,36.0215986668234,31.1066847816341,19.7904585057328,19.9981081234655,22.5815522611768,23.2862877605011,26.3472898825658,53.6657047199273,37.2660186201199,22.594797223154,4.51491074630118,13.5328896730319,16.8331497668853,20.8405497918181,44.0729483908516,19.9141507154247,17.5454597596579,38.9943519316282,26.1624199710651,33.0932020374153,20.1191145644135,26.8713861548679,16.5152698351002,25.571468578963,19.753326447184,33.5853200802851,37.4725709891585,19.0419213101497,24.3578048268211,32.9671467515052,28.7176823822411,25.8455774444597,29.4572548039248,37.7777569396231,18.748163553594,22.2323769180886,33.7816153761398,13.1460549884373,26.1475691540588,20.0675416412032,23.9812774533641,33.1798472131664,31.8536003948476,21.161073620616,42.4074320710097,45.293211605879,32.879618721408,20.9436265226231,26.1144716993232,7.72860856169766,17.3381010561369,14.9641746948714,24.2602534771991,12.2846694253264,46.6038994042172,63.2395347168581,23.2167443048458,20.4797331806553,24.5219079186128,33.5670848363874,27.9669979589906,23.2780178609467,31.8454489728942,41.8798301470325,35.5726252566466,20.4653743023144,25.3252642803108,28.6919745842143,26.5372159952902,21.9555835320369,14.8967981558083,23.0531067095865,25.0993966973022,22.186824920327,23.4640942403454,37.8948476966886,29.7034210170489,44.6057038704293,34.8203662912475,52.252664245427 | |||
|short_description=p1@NDNL2 | |||
}} |
Latest revision as of 02:33, 17 September 2015
Short description: | p1@NDNL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NDNL2_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 0bp_to_ENST00000332303, NM_138704, uc001zco.2_5end |
EntrezGene: | NDNL2 |
HGNC: | 7677 |
UniProt: | Q96MG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.08e-16 | 52 |
lymphocyte | 4.47e-15 | 53 |
common lymphoid progenitor | 4.47e-15 | 53 |
mature alpha-beta T cell | 1.54e-11 | 18 |
alpha-beta T cell | 1.54e-11 | 18 |
immature T cell | 1.54e-11 | 18 |
mature T cell | 1.54e-11 | 18 |
immature alpha-beta T cell | 1.54e-11 | 18 |
T cell | 2.07e-08 | 25 |
pro-T cell | 2.07e-08 | 25 |
leukocyte | 3.32e-08 | 136 |
CD8-positive, alpha-beta T cell | 6.14e-08 | 11 |
hematopoietic lineage restricted progenitor cell | 1.55e-07 | 120 |
nongranular leukocyte | 2.63e-07 | 115 |
lymphocyte of B lineage | 4.26e-07 | 24 |
pro-B cell | 4.26e-07 | 24 |
B cell | 7.36e-07 | 14 |