FFCP PHASE1:Hg19::chr15:101282039..101282050,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:101282039..101282050,+ | |||
|description=CAGE_peak_at_chr15:101282039..101282050,+ | |||
|id=chr15:101282039..101282050,+ | |||
|ontology_enrichment_celltype=CL:0002144!1.10e-11!3;CL:1001319!9.44e-10!1;CL:1000600!9.44e-10!1;CL:0000223!1.18e-09!59;CL:0000083!4.51e-09!4;CL:0002076!2.49e-08!43;CL:0000066!5.32e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:1001319;2.30e-21;1!CL:1000600;2.30e-21;1!CL:0002144;8.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,2.30e-21,1;CL:1000600,2.30e-21,1;CL:0000076,5.57e-08,63;CL:0002144,7.76e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.73e-11;2!UBERON:0010056;2.73e-11;2 | |||
|ontology_enrichment_disease=DOID:1749!1.09e-09!14;DOID:0050619!3.83e-09!1;DOID:1357!3.83e-09!1;DOID:1793!4.51e-09!4;DOID:305!2.15e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.83e-23;14!DOID:4074;2.02e-11;2!DOID:4905;2.02e-11;2!DOID:3498;2.02e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.97e-23,14;DOID:4074,2.02e-11,2;DOID:4905,2.02e-11,2;DOID:3498,2.02e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001915!1.10e-11!3;UBERON:0001982!1.10e-11!3;UBERON:0004645!9.44e-10!1;UBERON:0001256!9.44e-10!1;UBERON:0001259!9.44e-10!1;UBERON:0000997!1.43e-09!1;UBERON:0005056!1.43e-09!1;UBERON:0003343!3.13e-09!4;UBERON:0004785!3.13e-09!4;UBERON:0001764!3.83e-09!1;UBERON:0001825!3.83e-09!1;UBERON:0003729!1.50e-07!5;UBERON:0002075!1.93e-07!18;UBERON:0000344!9.19e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;2.30e-21;1!UBERON:0001256;2.30e-21;1!UBERON:0001259;2.30e-21;1!UBERON:0000997;6.31e-21;1!UBERON:0005056;6.31e-21;1!UBERON:0004176;6.31e-21;1!UBERON:0003343;8.99e-21;4!UBERON:0004785;8.99e-21;4!UBERON:0000974;3.36e-14;6!UBERON:0001255;2.23e-11;2!UBERON:0001556;2.23e-11;2!UBERON:0000344;1.30e-09;20!UBERON:0001723;5.93e-08;3!UBERON:0001033;5.93e-08;3!UBERON:0010523;8.02e-08;3!UBERON:0001915;8.02e-08;3!UBERON:0001982;8.02e-08;3!UBERON:0003729;4.73e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,2.30e-21,1;UBERON:0001256,2.30e-21,1;UBERON:0001259,2.30e-21,1;UBERON:0000997,6.31e-21,1;UBERON:0005056,6.31e-21,1;UBERON:0003343,9.46e-21,4;UBERON:0004785,9.46e-21,4;UBERON:0001255,2.23e-11,2;UBERON:0001556,2.23e-11,2;UBERON:0000344,1.32e-09,20;UBERON:0000974,6.80e-09,10;UBERON:0001723,5.93e-08,3;UBERON:0001033,5.93e-08,3;UBERON:0010056,5.93e-08,3;UBERON:0010523,7.76e-08,3;UBERON:0001915,7.76e-08,3;UBERON:0001982,7.76e-08,3;UBERON:0003729,4.81e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46062018077475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61131726843659,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4176944707291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0878525631105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35181753794506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400794101257669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537052785212442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11828617486854,7.39364263362165,0,0,3.58049199809294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392600934460972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.617506634701,0,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p@chr15:101282039..101282050,+ | |||
}} |
Latest revision as of 00:16, 25 July 2015
Short description: | p@chr15:101282039..101282050, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:101282039..101282050, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 2.30e-21 | 1 |
lower urinary tract cell | 2.30e-21 | 1 |
squamous epithelial cell | 5.57e-08 | 63 |
capillary endothelial cell | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 2.30e-21 | 1 |
wall of urinary bladder | 2.30e-21 | 1 |
mucosa of urinary bladder | 2.30e-21 | 1 |
mammalian vulva | 6.31e-21 | 1 |
external female genitalia | 6.31e-21 | 1 |
mucosa of oral region | 9.46e-21 | 4 |
respiratory system mucosa | 9.46e-21 | 4 |
urinary bladder | 2.23e-11 | 2 |
lower urinary tract | 2.23e-11 | 2 |
mucosa | 1.32e-09 | 20 |
neck | 6.80e-09 | 10 |
tongue | 5.93e-08 | 3 |
gustatory system | 5.93e-08 | 3 |
future tongue | 5.93e-08 | 3 |
microcirculatory vessel | 7.76e-08 | 3 |
endothelium of capillary | 7.76e-08 | 3 |
capillary | 7.76e-08 | 3 |
mouth mucosa | 4.81e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.97e-23 | 14 |
pancreas adenocarcinoma | 2.02e-11 | 2 |
pancreatic carcinoma | 2.02e-11 | 2 |
pancreatic ductal adenocarcinoma | 2.02e-11 | 2 |