FFCP PHASE1:Hg19::chr14:99947715..99947791,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8812 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1596 | |||
|TSSclassifier=strong | |||
|UniProt=C9JSW4,A8MZK4,O75909,C9JI13,G3V5E1,G3V235,G3V2Q3 | |||
|association_with_transcript=0bp_to_ENST00000216279,ENST00000380246,ENST00000389879,ENST00000437596,ENST00000553636,ENST00000555049,ENST00000555842,ENST00000556641,ENST00000557441,NM_001099402,uc001ygg.3,uc001ygi.3_5end | |||
|cluster_id=chr14:99947715..99947791,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_1_at_CCNK_5end | |||
|id=chr14:99947715..99947791,+ | |||
|ontology_enrichment_celltype=CL:0000003!1.58e-24!722;CL:0000012!1.17e-19!682;CL:0000548!2.13e-19!679;CL:0000004!2.13e-19!679;CL:0000255!2.13e-19!679;CL:0002057!2.28e-18!42;CL:0000144!4.31e-17!625;CL:0000063!4.83e-17!578;CL:0000860!6.85e-17!45;CL:0002371!3.13e-16!591;CL:0000738!7.43e-16!140;CL:0000988!1.10e-15!182;CL:0000037!2.22e-15!172;CL:0000566!2.22e-15!172;CL:0002032!5.31e-15!165;CL:0000837!5.31e-15!165;CL:0000763!9.97e-15!112;CL:0000049!9.97e-15!112;CL:0000766!9.88e-14!76;CL:0002031!5.11e-11!124;CL:0000034!1.35e-10!444;CL:0000839!1.98e-10!70;CL:0002087!3.00e-10!119;CL:0002009!3.85e-10!65;CL:0000557!4.55e-10!71;CL:0000723!6.37e-10!436;CL:0000134!1.25e-09!358;CL:0000048!2.13e-09!430;CL:0002194!2.41e-09!63;CL:0000576!2.41e-09!63;CL:0000040!2.41e-09!63;CL:0000559!2.41e-09!63;CL:0002320!6.42e-09!365;CL:0000219!2.44e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.04e-17;33!CL:0002057;5.04e-17;33!CL:0000473;1.56e-10;39!CL:0000234;1.56e-10;39!CL:0000576;2.53e-10;48!CL:0000766;4.59e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.28e-18,42;CL:0002057,2.28e-18,42;CL:0000738,9.86e-17,136;CL:0000988,2.17e-16,177;CL:0000037,4.09e-16,168;CL:0002032,9.57e-16,161;CL:0000837,9.57e-16,161;CL:0000763,1.04e-15,108;CL:0000049,1.04e-15,108;CL:0000766,5.38e-15,72;CL:0000473,5.47e-14,48;CL:0000234,5.47e-14,48;CL:0002031,9.59e-12,120;CL:0000839,1.67e-11,66;CL:0002009,2.96e-11,61;CL:0000557,4.22e-11,67;CL:0002087,5.87e-11,115;CL:0000034,1.71e-10,441;CL:0002194,2.07e-10,59;CL:0000576,2.07e-10,59;CL:0000040,2.07e-10,59;CL:0000559,2.07e-10,59;CL:0000723,7.98e-10,433;CL:0000134,9.33e-10,354;CL:0000048,2.64e-09,427;CL:0002320,4.91e-09,361;CL:0000219,1.96e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.17e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.50e-11!102;UBERON:0003061!1.50e-11!102;UBERON:0002193!8.15e-11!112;UBERON:0002371!1.22e-09!80;UBERON:0003081!1.83e-08!216;UBERON:0002384!2.03e-08!375;UBERON:0001474!2.04e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.02e-12,98;UBERON:0003061,2.02e-12,98;UBERON:0002193,1.38e-11,108;UBERON:0002371,1.51e-10,76;UBERON:0002405,4.36e-10,93;UBERON:0001474,3.48e-09,82;UBERON:0003081,5.13e-09,203;UBERON:0002384,1.58e-08,371;UBERON:0004765,1.50e-07,90 | |||
|phase1_expression=46.8730218518036,50.741824162163,65.5437979046266,38.0278533741896,36.2038486486103,56.702004066524,40.5279805069297,63.1719873426831,46.7522274477711,88.9556850135462,100.48336818803,104.633417250353,74.9098218168808,52.1056345961796,37.1165060815266,67.9048397916293,71.7206488348533,57.6944971406025,57.5760702572798,80.5211719822193,62.8322129032299,80.2444086983905,46.0839939281001,46.4004300997077,44.4420944165602,139.454465490011,140.063605601607,145.772366992934,213.990166605804,176.561523124718,108.835734691201,49.6487461218621,90.9641874710315,158.254716351385,71.657160536779,63.40747768939,38.1680571135301,131.296911822055,185.503613909881,133.678696360965,47.0222495903841,51.4990928970177,45.3332999036168,100.17938651912,131.122952460017,113.044172513522,150.381586877978,144.319928695661,176.532631410209,170.601588647035,153.184102504402,158.916058485129,169.614874922416,203.973160012489,232.933556942268,136.099211489303,150.098382531815,111.462848284762,147.226352230404,191.594629164428,184.768429355923,132.270371374873,139.824023992764,113.375783641697,210.691907244352,171.350337856724,234.181165622336,155.522923793924,149.665597586598,152.032191293582,193.122441340045,226.122468496365,212.029799585393,79.854498225914,82.0652597865068,61.6396417794625,77.9560700156676,84.0990599912435,153.171484122317,55.007459542061,82.5504210376224,66.4897519703268,38.719173781491,32.7683166757279,32.9118423929515,31.151306247355,51.2506863406096,38.5084134769504,30.4080641481037,40.0702576904853,84.8127323973078,105.115456897398,120.416066859447,77.9810838616253,112.662221159289,33.9765469359849,152.056652297993,139.125810013204,125.005711391702,73.0604984857263,73.3325099925578,68.1764840258016,58.4480185223734,81.8866858106026,69.8216000715364,65.7955666913355,107.509133914711,63.4052032642092,59.0469437921847,63.8019069862263,48.6376031303093,98.2432460641828,92.6791019762878,81.0648709111831,93.0366161864293,72.9712166972326,74.3447757587727,65.6328420871823,117.907176481088,48.1033775629386,37.1117568698159,27.5631092890028,58.1219959640203,70.5206227460845,52.4709051519853,44.2773461322312,50.0888078121838,145.963282094706,164.208280211073,135.410817630417,21.9426179682566,39.5713507225145,39.1259439241203,71.2035130197596,56.6511839018555,45.9163465105811,184.506339715855,71.5353259344875,47.2674085820339,48.3370086468389,41.7215232042349,82.3203489503124,139.889390704336,94.5500329100295,50.9539408037853,51.3682725032838,56.9060071020743,81.563793512427,68.6393892936154,80.6062777885156,118.26363238319,74.8404097742328,80.8837368745695,69.5328768566532,72.9929019005236,91.0640718821623,102.825523536111,58.143770813099,63.3263947582344,69.9566080678161,66.4668373230093,63.8628568803551,61.0155143870424,76.1062576315948,79.3939108924124,80.8162540970922,46.9266388788695,50.7877776979783,65.9261541103298,94.9265659568129,51.8460935323053,288.599114184979,391.658066789809,116.873205974199,59.6366342034382,76.8647205803999,65.5425445025433,67.1197692552224,74.1256918794566,53.8250496136615,113.153935473487,68.8202460083876,76.2467036729427,55.7702182368509,51.327037577626,103.679837936778,46.6702498828799,153.714859282971,50.2577723696816,95.268794197923,51.5597947903714,58.95211831917,64.4254318585163,64.3264694696298,88.3987561533688,65.5935254444841,91.0300132158494,74.8441800087694,42.2826449066332,446.889228711571,150.90980978141,61.9476899350964,83.704289794344,127.726557238208,53.5552697474622,55.1678032438235,45.3718937897922,45.9400341798085,86.4658044020315,51.4673307052747,65.0630936559855,58.5177637364584,95.1174844870791,78.0650836338256,67.0020682793723,81.6877448047729,99.6780562799062,93.9053640188106,76.1252661771816,85.3491180003327,75.9720527985555,82.1129600555268,82.5760084552075,51.9871695009268,77.1871521272062,59.9421604363018,82.8201464619953,84.9515814940721,78.0823296083164,89.3558294232493,78.9764263240717,67.8857887881044,98.5632053677841,84.264562903268,96.6944449467364,61.2965665002212,58.4722380152364,49.4522424166547,52.2612539242115,58.5656802616861,51.6175792387604,47.2798393680521,53.8604305382189,53.1235354151048,55.9231175607236,50.7866247169235,91.5312763734564,109.388583566688,97.9546146968732,97.0257495144577,36.7589600983309,28.5019892836512,31.3118650541144,53.4170350291727,111.304536881518,56.2742417779164,149.699389297365,125.889963648534,66.5501797364996,123.327808951161,163.555769265783,99.8337393868395,46.1860294480874,48.342978874607,55.0646775966004,60.2008087163678,50.9284063834272,45.8512506885382,111.418820112258,99.5843948030052,51.7055712783534,53.5869767168854,53.061324937076,28.1201501960331,115.403722072617,105.197122153851,94.3946829288021,95.9091997096074,82.4272760205204,1507.54950796159,72.8160549289379,74.0161372480556,82.0042534942511,75.1142478886961,58.0370753830425,91.6772221339866,63.2974214934254,44.4788359659034,50.3854714246285,42.0480280981484,71.7424345902751,161.244499288629,75.8570519769907,94.7530652806674,73.167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| |||
|short_description=p1@CCNK | |||
}} |
Latest revision as of 21:29, 16 September 2015
Short description: | p1@CCNK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCNK_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000216279, ENST00000380246, ENST00000389879, ENST00000437596, ENST00000553636, ENST00000555049, ENST00000555842, ENST00000556641, ENST00000557441, NM_001099402, uc001ygg.3, uc001ygi.3_5end |
EntrezGene: | CCNK |
HGNC: | 1596 |
UniProt: | C9JSW4A8MZK4O75909C9JI13G3V5E1G3V235G3V2Q3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.28e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.28e-18 | 42 |
leukocyte | 9.86e-17 | 136 |
hematopoietic cell | 2.17e-16 | 177 |
hematopoietic stem cell | 4.09e-16 | 168 |
hematopoietic oligopotent progenitor cell | 9.57e-16 | 161 |
hematopoietic multipotent progenitor cell | 9.57e-16 | 161 |
myeloid cell | 1.04e-15 | 108 |
common myeloid progenitor | 1.04e-15 | 108 |
myeloid leukocyte | 5.38e-15 | 72 |
defensive cell | 5.47e-14 | 48 |
phagocyte | 5.47e-14 | 48 |
hematopoietic lineage restricted progenitor cell | 9.59e-12 | 120 |
myeloid lineage restricted progenitor cell | 1.67e-11 | 66 |
macrophage dendritic cell progenitor | 2.96e-11 | 61 |
granulocyte monocyte progenitor cell | 4.22e-11 | 67 |
nongranular leukocyte | 5.87e-11 | 115 |
stem cell | 1.71e-10 | 441 |
monopoietic cell | 2.07e-10 | 59 |
monocyte | 2.07e-10 | 59 |
monoblast | 2.07e-10 | 59 |
promonocyte | 2.07e-10 | 59 |
somatic stem cell | 7.98e-10 | 433 |
mesenchymal cell | 9.33e-10 | 354 |
multi fate stem cell | 2.64e-09 | 427 |
connective tissue cell | 4.91e-09 | 361 |
motile cell | 1.96e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.02e-12 | 98 |
blood island | 2.02e-12 | 98 |
hemolymphoid system | 1.38e-11 | 108 |
bone marrow | 1.51e-10 | 76 |
immune system | 4.36e-10 | 93 |
bone element | 3.48e-09 | 82 |
lateral plate mesoderm | 5.13e-09 | 203 |
connective tissue | 1.58e-08 | 371 |
skeletal element | 1.50e-07 | 90 |