FFCP PHASE1:Hg19::chr14:98444369..98444380,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388011 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20111 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=80bp_to_NR_015430,uc001yfw.2,uc001yfx.2,uc001yfy.2,uc010avq.2_5end | |||
|cluster_id=chr14:98444369..98444380,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_4_at_C14orf64_5end | |||
|id=chr14:98444369..98444380,- | |||
|ontology_enrichment_celltype=CL:0000791!3.37e-23!18;CL:0000789!3.37e-23!18;CL:0002420!3.37e-23!18;CL:0002419!3.37e-23!18;CL:0000790!3.37e-23!18;CL:0000084!1.46e-17!25;CL:0000827!1.46e-17!25;CL:0000625!1.03e-15!11;CL:0000624!7.90e-11!6;CL:0000838!1.30e-08!52;CL:0000542!2.39e-08!53;CL:0000051!2.39e-08!53 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.30e-31;18!CL:0000789;2.30e-31;18!CL:0002419;2.30e-31;18!CL:0000084;1.00e-26;25!CL:0000625;7.45e-26;11!CL:0000624;1.70e-09;6!CL:0000226;1.01e-08;3!CL:0000898;1.01e-08;3!CL:0000842;1.01e-08;3!CL:0000542;8.45e-08;53!CL:0000895;3.72e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.43e-31,18;CL:0000789,1.43e-31,18;CL:0002420,1.43e-31,18;CL:0002419,1.43e-31,18;CL:0000790,1.43e-31,18;CL:0000084,5.15e-27,25;CL:0000827,5.15e-27,25;CL:0000625,6.35e-26,11;CL:0000838,6.52e-12,52;CL:0000542,1.20e-11,53;CL:0000051,1.20e-11,53;CL:0000624,1.26e-09,6;CL:0000898,6.09e-09,3;CL:0000226,1.97e-08,3;CL:0000842,1.97e-08,3;CL:0000810,2.67e-07,1;CL:0000895,2.67e-07,1;CL:0002436,2.67e-07,1;CL:0002427,2.67e-07,1;CL:0002428,2.67e-07,1;CL:0002429,2.67e-07,1;CL:0002433,2.67e-07,1;CL:0002431,2.67e-07,1;CL:0002432,2.67e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;2.30e-31;18!CL:0000051;8.45e-08;53!CL:0002427;3.72e-07;1!UBERON:0006298;3.72e-07;1!UBERON:0005754;3.72e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.66e-16!115;UBERON:0000178!1.44e-10!15;UBERON:0000179!1.44e-10!15;UBERON:0000463!1.44e-10!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.62e-18;15!UBERON:0000179;1.62e-18;15!UBERON:0000463;1.62e-18;15!UBERON:0002370;1.21e-12;2!UBERON:0005058;1.21e-12;2!UBERON:0009113;1.21e-12;2!UBERON:0002390;4.65e-12;32!UBERON:0002193;1.42e-08;42!UBERON:0007029;3.72e-07;1!UBERON:0000029;3.72e-07;1!UBERON:0000998;3.72e-07;1!UBERON:0001736;3.72e-07;1!UBERON:0006868;3.72e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.69e-18,15;UBERON:0000179,2.69e-18,15;UBERON:0000463,2.69e-18,15;UBERON:0002370,9.02e-14,4;UBERON:0005058,9.02e-14,4;UBERON:0009113,9.02e-14,4;UBERON:0003295,9.02e-14,4;UBERON:0005562,9.02e-14,4;UBERON:0003408,1.43e-09,10;UBERON:0003351,2.38e-09,6;UBERON:0004177,4.44e-08,7;UBERON:0005057,4.44e-08,7;UBERON:0000029,1.97e-07,1;UBERON:0007029,3.02e-07,1;UBERON:0001736,3.21e-07,1;UBERON:0006298,3.21e-07,1;UBERON:0000998,4.34e-07,1;UBERON:0006868,4.34e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16380747125216,0.393010762749165,0.616804496998528,0.668745981562712,1.62961133316795,2.36723902867367,1.94826728407911,0.334231370655521,0.589211814949674,0.886135578334485,1.08321545506006,0.128091319725675,0.520237390239513,0.822189523018381,1.10540007114339,1.15921234294021,4.15202376853769,4.54819407752512,3.1360657141493,0.226618685395132,1.53288197440768,0.34362744548263,1.26509846009751,1.27426165729639,1.30216690771284,3.8018081777935,2.25862678616659,2.8157054453972,1.24930726552346,0.947109008176067,1.64225599384209,0.403213486449465,0,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0.502644862058154,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.77005821767849,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.07857100409308,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.52234282769651,2.29391162142713,0,2.38231775457789,1.23408681925858,1.29694662238543,0.540031437238115,0.79312517629427,0,0,0,0,0,1.9919716137556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.437299999980979,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,1.9846640872478,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0.332787154610557,0.124192805882767,0.138348634936231,0,0,0,0,0.936669811613763,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0.509197589862076,0,0.123935764259002,0.558644917973244,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.682986574053893,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0.22910686854405,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0.375935671919414,0.128915775947154,0,0,0,0,0,1.37618785021362,0,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.426467963801962,0,1.55013383606415,1.11734485732544,0,0,0.202117188958219,0,0,0.673520530145875,0.0717222053926763,0.665320713092027,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p4@C14orf64 | |||
}} |
Latest revision as of 20:41, 16 September 2015
Short description: | p4@C14orf64 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C14orf64_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 80bp_to_NR_015430, uc001yfw.2, uc001yfx.2, uc001yfy.2, uc010avq.2_5end |
EntrezGene: | C14orf64 |
HGNC: | 20111 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.43e-31 | 18 |
alpha-beta T cell | 1.43e-31 | 18 |
immature T cell | 1.43e-31 | 18 |
mature T cell | 1.43e-31 | 18 |
immature alpha-beta T cell | 1.43e-31 | 18 |
T cell | 5.15e-27 | 25 |
pro-T cell | 5.15e-27 | 25 |
CD8-positive, alpha-beta T cell | 6.35e-26 | 11 |
lymphoid lineage restricted progenitor cell | 6.52e-12 | 52 |
lymphocyte | 1.20e-11 | 53 |
common lymphoid progenitor | 1.20e-11 | 53 |
CD4-positive, alpha-beta T cell | 1.26e-09 | 6 |
naive T cell | 6.09e-09 | 3 |
single nucleate cell | 1.97e-08 | 3 |
mononuclear cell | 1.97e-08 | 3 |
CD4-positive, alpha-beta thymocyte | 2.67e-07 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 2.67e-07 | 1 |
mature CD4 single-positive thymocyte | 2.67e-07 | 1 |
resting double-positive thymocyte | 2.67e-07 | 1 |
double-positive blast | 2.67e-07 | 1 |
CD69-positive double-positive thymocyte | 2.67e-07 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 2.67e-07 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 2.67e-07 | 1 |
CD24-positive, CD4 single-positive thymocyte | 2.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 2.69e-18 | 15 |
haemolymphatic fluid | 2.69e-18 | 15 |
organism substance | 2.69e-18 | 15 |
thymus | 9.02e-14 | 4 |
hemolymphoid system gland | 9.02e-14 | 4 |
thymic region | 9.02e-14 | 4 |
pharyngeal gland | 9.02e-14 | 4 |
thymus primordium | 9.02e-14 | 4 |
gland of gut | 1.43e-09 | 10 |
pharyngeal epithelium | 2.38e-09 | 6 |
hemopoietic organ | 4.44e-08 | 7 |
immune organ | 4.44e-08 | 7 |
lymph node | 1.97e-07 | 1 |
surface | 3.02e-07 | 1 |
submandibular gland | 3.21e-07 | 1 |
submandibular gland primordium | 3.21e-07 | 1 |
seminal vesicle | 4.34e-07 | 1 |
seminal fluid secreting gland | 4.34e-07 | 1 |