FFCP PHASE1:Hg19::chr14:93118094..93118129,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79890 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=18751 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TB24 | |||
|association_with_transcript=167bp_to_uc001yar.1,uc001yas.1_5end | |||
|cluster_id=chr14:93118094..93118129,+ | |||
|coexpression_cluster_id=C446 | |||
|description=CAGE_peak_8_at_RIN3_5end | |||
|id=chr14:93118094..93118129,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.65e-38!172;CL:0000566!4.65e-38!172;CL:0002032!5.25e-37!165;CL:0000837!5.25e-37!165;CL:0000988!2.57e-35!182;CL:0000738!1.06e-34!140;CL:0000763!2.93e-34!112;CL:0000049!2.93e-34!112;CL:0000766!1.09e-31!76;CL:0002057!1.52e-29!42;CL:0002031!6.73e-28!124;CL:0000557!4.33e-27!71;CL:0000839!4.45e-26!70;CL:0000860!4.96e-26!45;CL:0002087!1.95e-25!119;CL:0002009!9.26e-23!65;CL:0002194!6.06e-22!63;CL:0000576!6.06e-22!63;CL:0000040!6.06e-22!63;CL:0000559!6.06e-22!63;CL:0000134!1.41e-08!358;CL:0000094!5.67e-08!8;CL:0002320!7.40e-08!365;CL:0002393!3.60e-07!9;CL:0002397!3.60e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.44e-45;33!CL:0002057;9.44e-45;33!CL:0000473;1.91e-34;39!CL:0000234;1.91e-34;39!CL:0000576;1.04e-31;48!CL:0000766;5.75e-31;69!CL:0000763;3.78e-18;100!CL:0002087;1.48e-17;104!CL:0000094;4.81e-16;8!CL:0000081;1.41e-13;11!CL:0000738;2.08e-13;136!CL:0000988;2.95e-11;177!CL:0002393;3.65e-11;6!CL:0002397;3.65e-11;6!CL:0000097;2.72e-10;5!CL:0000775;3.01e-07;3!CL:0000226;8.17e-07;3!CL:0000842;8.17e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.31e-64,72;CL:0000738,8.71e-63,136;CL:0000037,2.27e-61,168;CL:0000860,9.79e-60,42;CL:0002057,9.79e-60,42;CL:0000988,1.71e-58,177;CL:0002032,1.78e-57,161;CL:0000837,1.78e-57,161;CL:0000473,4.01e-56,48;CL:0000234,4.01e-56,48;CL:0000763,3.51e-51,108;CL:0000049,3.51e-51,108;CL:0000557,1.03e-49,67;CL:0002031,1.83e-49,120;CL:0002087,2.23e-48,115;CL:0000839,3.81e-48,66;CL:0002194,4.19e-42,59;CL:0000576,4.19e-42,59;CL:0000040,4.19e-42,59;CL:0000559,4.19e-42,59;CL:0002009,2.66e-40,61;CL:0000134,2.99e-19,354;CL:0002320,2.06e-18,361;CL:0000219,4.40e-16,386;CL:0000094,5.06e-16,8;CL:0000081,1.80e-13,11;CL:0000034,3.68e-13,441;CL:0000048,3.80e-13,427;CL:0000723,1.23e-12,433;CL:0002393,1.04e-11,9;CL:0002397,1.04e-11,9;CL:0000097,2.69e-10,5;CL:0002028,2.69e-10,5;CL:0000838,5.74e-08,52;CL:0000542,1.00e-07,53;CL:0000051,1.00e-07,53;CL:0000775,3.02e-07,3;CL:0000226,8.36e-07,3;CL:0000842,8.36e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.17e-44;42!CL:0000049;8.11e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.84e-30!102;UBERON:0003061!5.84e-30!102;UBERON:0002193!3.03e-29!112;UBERON:0002371!6.36e-24!80;UBERON:0001474!1.53e-22!86;UBERON:0002405!2.15e-19!115;UBERON:0004765!5.01e-18!101;UBERON:0001434!5.01e-18!101;UBERON:0007023!1.45e-08!115;UBERON:0003081!3.09e-07!216;UBERON:0002384!3.63e-07!375;UBERON:0002204!8.57e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.38e-09;15!UBERON:0000179;3.38e-09;15!UBERON:0000463;3.38e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.94e-51,98;UBERON:0003061,1.94e-51,98;UBERON:0002193,5.65e-45,108;UBERON:0002371,4.92e-44,76;UBERON:0001474,1.05e-39,82;UBERON:0002405,2.50e-36,93;UBERON:0004765,7.79e-35,90;UBERON:0001434,7.40e-30,100;UBERON:0003081,8.26e-20,203;UBERON:0002384,2.84e-17,371;UBERON:0002204,5.05e-13,167;UBERON:0000178,3.52e-09,15;UBERON:0000179,3.52e-09,15;UBERON:0000463,3.52e-09,15;UBERON:0000926,9.45e-08,315;UBERON:0004120,9.45e-08,315;UBERON:0006603,9.45e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,3.132949635666,2.21671591514854,2.04648031415566,12.194292582316,4.22212337906934,7.58599004248772,0,0.6024118375565,0,0,0,1.76160263600908,9.41792194504192,27.2740448559393,14.1057065965304,0.223915474239924,0,0,6.25212426752128,3.77875943688809,5.82201746850759,6.97287110717054,4.52284676824008,4.02618282163635,3.45230870786581,5.37937483711111,1.18241114944293,4.82643953031266,8.39130088658974,2.70852973188684,5.83551252582075,2.18324920046277,2.47195832889593,9.48860066349798,5.45579346029359,8.31138263538754,3.95821560224059,3.98927315243264,1.27867425159808,2.03146467040009,5.6738522469114,0.622822248995575,4.27122730936464,7.30076085788282,3.04064382587163,2.42159801053347,3.31449872388808,1.89877432464531,2.11255286311942,2.33864729961548,2.72556239160889,6.9643751310827,6.15725260650176,12.5365957623723,1.42506371870624,0.79566670879636,1.27864907635244,3.51992488922645,0,0,0.853460445133014,0,0.574752439954483,0,0,7.96898156753228,8.22132065119314,11.8504700718821,1.32171328579026,4.48406850385229,0.790152254325231,2.360517241366,1.57204305099666,2.87842098599313,0.167186495390678,1.30368906653436,1.4203434172042,0,0.334231370655521,0.294605907474837,0.886135578334485,0.812411591295047,1.0247305578054,0.260118695119756,1.31550323682941,0.276350017785848,1.15921234294021,1.63115219478266,2.1403266247177,0,0.226618685395132,0.383220493601921,0,0.506039384039006,0.637130828648193,0,0,0.451725357233318,0.255973222308837,0,0,0,1.61285394579786,0.534880391567015,1.59306844271079,2.43806866313962,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.392937226493138,0,0.370784442784429,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0.488124115096339,0.367663080345869,0,0,0,0,0,0,0,28.9916918359339,31.022421131866,0.436094052142534,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0.234321431833797,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0.910161361938026,0.718618141816238,0,0,0.277064115484183,0.438977620880838,0,0.150238058906597,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0.169560592310488,0,0.272746120590835,0,0,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0.492434012174795,0.468008530278475,0.594524649154913,0,0,0.141775097242386,0,0,0,11.3312544716067,2.3773077183571,18.6595303986695,35.5976284939895,10.2256371075368,0.253991577168676,1.14596527667483,0,0,0,0,0.571652865261156,0,0,0.22001485746285,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0.502257091432126,4.21667878966063,0,1.14861935834114,0,0,0.205476322550383,0,0.224170287987055,4.53170748464433,5.39068937148793,8.59898343074314,0,2.60279707715243,0,0,0,26.2152458381514,20.9413021442817,38.1262272361153,0,0,0.271265023699736,0.415941723061614,0.178428988797162,0,0.35142424497814,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,6.82334486205528,13.8057088523915,6.19019835259977,0,0,0,0.248107807818777,0,0,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,1.03850885836724,0,0.120859449591622,0,0.184161977871793,0,0,0,0,0,0,0,0,2.27466768141793,0.510281115829547,0.215915916102139,0,0,0,0,0,0.223874754722178,0.657779629937804,0.261435451024901,0,0,0,0.206082023295445,0.183138929636687,0,0,0,1.6068392984416,0.386682873168488,0.154048617114644,0,0.137836572484531,0.107420244868274,0.145016693914229,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0.243713489631284,0,0,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.282431402330337,0,0,0.443430153536676,0,1.01489521846434,0,0.569647187174163,1.42939065274673,1.23408681925858,1.94541993357815,1.08006287447623,1.58625035258854,0,0,0,0.371606350251437,0,0,0,0.199579371432817,2.48956981172077,2.96343015813436,0,2.24637742490767,0,0.156679895773023,0,0.677167111206413,0.642352300414798,0.201799707191048,0.425846237690326,5.49608551609224,0.307240764308458,0,0,0.390776190804081,0,0,1.35227839237992,0,5.63948020351398,0,0.73254089635947,0,3.90051844971174,0.852408440419239,0,0.296964680832639,0,0.994147647766298,0.140669416410513,0.111308705022906,0,0,0.796991953004279,0.552567831062295,0,0,1.23084805461069,0.622079175323615,0,0.179021174675609,0.511572370226872,1.479651084554,2.3948309234694,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0.120596438625408,1.52581736317083,0.110579259931225,0,0.219385397153973,0,0.139423744278603,0.307801034015188,0,0.23056390438806,0,0.325942115766024,0,0,0,0,0.156980256395025,0.332423363800313,0,0,0,0,1.27149263184303,0,0,0.141353071433941,0,0.995261931078505,0.0884575645033392,0,0,0.123563938946503,0,0.337005664903385,0,0.468528891450678,0,0.19566461893209,0,0,0,0,0.821425535170343,0,0,0.664653872707185,0,0.627865836814451,0,0,0,0,0.293977192243133,0.0870592065804026,0.17472666824203,0,0,0,0,0.0969890164884194,0.176512253383001,0,0,0,0,0,0,0.640358984218058,0.19980960958213,0.144090417154106,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,1.20084057741958,0.136905378891993,6.38732940334862,0,1.05154941711726,0.558564802544508,0.916641696046735,1.43574604915363,0,0.429226048136571,0.669514372325618,0,0.720599767084807,0,0,0.164831716762333,0.202210631562555,0,0,0.795229689809303,0.272406812223151,0,0,0,0.674921674654501,0.77380195455795,0,0,0.394028536495991,0.104909176269996,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,0,0.328370082997356,0,0,0.293104467356165,0,0.646414781807753,0.52893040697076,0,0,2.0289608387862,0.314408610199332,0.414239055347196,0.992332043623902,0,0,0,0,0.2506898940227,0,0,0,0,0.366078794705889,0.250381861413,2.29363678276028,0.332787154610557,0.18628920882415,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0.889811221596536,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0.400027764663154,0.343395705182793,0,0,0.385239660814607,0,0,0,0,0,0.358177682162975,0,0.219284049578707,0,0,0,0,0,0,0,0.584580926518165,0.664324201566815,0.490696182767533,0.655219697692825,0,0,0,0.533458648470704,0,1.70254786070051,0,0,0,0,0,0,0,0,0.425149840203366,0,0.558644917973244,0,0,0,0,0,0.321146125482298,0,0.478901577171454,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0.115525666150338,0,0.690359926060101,0,0.451261970095544,0,0,0,0,0.147856086217045,0,0,0.620060389503552,0.0634158101939068,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0.266107110487916,0.921871900446234,0,0.203909198930495,0.131545547125698,0,0.111231401892069,0,0.785577949580009,0.280272163313789,0.913158720509496,0,0,0.142953088353313,0,0,0,0.801711364730253,0,0,0.691259661814092,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.385870790539723,0.874238242015829,0.470317296361523,0,0,2.35570160537934,1.18818560130834,0,0,1.69171052363736,1.16024198352439,0.199882311849858,0,0.352894871715692,0,0.730336388246517,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0.218531143927391,0,0,0,0.0918948995348449,0.250707539292375,0.151557396436479,0,0.829169439458779,0.413731983447581,0,0,0.258355639344024,0.248298857183432,0.112131862580613,0.0636471582781649,0,0,0,0.26940821205835,0.430333232356058,0.332660356546013,0,0,0,0,0,0.488965776731466,0,0,0.603821380773079,1.28227396921293 | |||
|short_description=p8@RIN3 | |||
}} |
Latest revision as of 15:00, 16 September 2015
Short description: | p8@RIN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RIN3_5end |
Coexpression cluster: | C446_Neutrophils_Mast_Eosinophils_Whole_CD14_immature_optic |
Association with transcript: | 167bp_to_uc001yar.1, uc001yas.1_5end |
EntrezGene: | RIN3 |
HGNC: | 18751 |
UniProt: | Q8TB24 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.94e-51 | 98 |
blood island | 1.94e-51 | 98 |
hemolymphoid system | 5.65e-45 | 108 |
bone marrow | 4.92e-44 | 76 |
bone element | 1.05e-39 | 82 |
immune system | 2.50e-36 | 93 |
skeletal element | 7.79e-35 | 90 |
skeletal system | 7.40e-30 | 100 |
lateral plate mesoderm | 8.26e-20 | 203 |
connective tissue | 2.84e-17 | 371 |
musculoskeletal system | 5.05e-13 | 167 |
blood | 3.52e-09 | 15 |
haemolymphatic fluid | 3.52e-09 | 15 |
organism substance | 3.52e-09 | 15 |
mesoderm | 9.45e-08 | 315 |
mesoderm-derived structure | 9.45e-08 | 315 |
presumptive mesoderm | 9.45e-08 | 315 |