FFCP PHASE1:Hg19::chr8:19614875..19614884,-: Difference between revisions
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|id=chr8:19614875..19614884,-
|short_description=p15@CSGALNACT1
|description=CAGE_peak_15_at_CSGALNACT1_5end
|association_with_transcript=-59bp_to_ENST00000524213_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55790 | |EntrezGene=55790 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24290 | |HGNC=24290 | ||
|TSSclassifier=strong | |||
|UniProt=E5RGK2 | |UniProt=E5RGK2 | ||
|association_with_transcript=-59bp_to_ENST00000524213_5end | |||
|cluster_id=chr8:19614875..19614884,- | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_15_at_CSGALNACT1_5end | |||
|id=chr8:19614875..19614884,- | |||
|ontology_enrichment_celltype=CL:0000071!3.53e-08!18;CL:0002546!3.53e-08!18;CL:0002139!5.86e-07!24;CL:0000775!8.74e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002591;3.28e-23;1!CL:0000771;2.59e-12;2!CL:0000094;4.67e-12;8!CL:0000081;5.00e-09;11!CL:0000775;8.96e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,4.10e-23,1;CL:0000771,2.07e-12,2;CL:0000094,4.18e-12,8;CL:0000081,4.61e-09,11;CL:0000775,8.96e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.03e-18;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.31e-12!115;UBERON:0001049!1.48e-09!57;UBERON:0005068!1.48e-09!57;UBERON:0006241!1.48e-09!57;UBERON:0007135!1.48e-09!57;UBERON:0002020!2.61e-09!34;UBERON:0003528!2.61e-09!34;UBERON:0001893!3.91e-09!34;UBERON:0001869!1.18e-08!32;UBERON:0002791!2.07e-08!33;UBERON:0001017!2.65e-08!82;UBERON:0005743!2.78e-08!86;UBERON:0001986!3.53e-08!18;UBERON:0004638!3.53e-08!18;UBERON:0004852!3.53e-08!18;UBERON:0002616!4.70e-08!59;UBERON:0002619!5.35e-08!22;UBERON:0002780!7.48e-08!41;UBERON:0001890!7.48e-08!41;UBERON:0006240!7.48e-08!41;UBERON:0000073!1.41e-07!94;UBERON:0001016!1.41e-07!94;UBERON:0000955!1.41e-07!69;UBERON:0006238!1.41e-07!69;UBERON:0003080!1.43e-07!42;UBERON:0001950!1.82e-07!20;UBERON:0003075!5.07e-07!86;UBERON:0007284!5.07e-07!86;UBERON:0000956!9.32e-07!25;UBERON:0000203!9.32e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.03e-18;5!UBERON:0000078;2.59e-12;2!UBERON:0002012;2.59e-12;2!UBERON:0008886;2.59e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009722,1.24e-18,11;UBERON:0007690,1.24e-18,11;UBERON:0002046,1.35e-18,5;UBERON:0004117,1.35e-18,5;UBERON:0007689,1.35e-18,5;UBERON:0007123,1.35e-18,5;UBERON:0003091,1.35e-18,5;UBERON:0000078,2.90e-12,2;UBERON:0007497,2.90e-12,2;UBERON:0003643,2.90e-12,2;UBERON:0003504,2.90e-12,2;UBERON:0003469,2.90e-12,2;UBERON:0003496,2.90e-12,2;UBERON:0002012,2.90e-12,2;UBERON:0008886,2.90e-12,2;UBERON:0007303,2.90e-12,2;UBERON:0002061,2.90e-12,2;UBERON:0005432,2.90e-12,2;UBERON:0004363,2.90e-12,2;UBERON:0008814,1.15e-11,18;UBERON:0004145,1.30e-08,3 | |||
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| ||
|short_description=p15@CSGALNACT1 | |||
}} | }} |
Latest revision as of 07:40, 17 September 2015
Short description: | p15@CSGALNACT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_CSGALNACT1_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | -59bp_to_ENST00000524213_5end |
EntrezGene: | CSGALNACT1 |
HGNC: | 24290 |
UniProt: | E5RGK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 4.10e-23 | 1 |
eosinophil | 2.07e-12 | 2 |
granulocyte | 4.18e-12 | 8 |
blood cell | 4.61e-09 | 11 |
neutrophil | 8.96e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
entire pharyngeal arch endoderm | 1.24e-18 | 11 |
early pharyngeal endoderm | 1.24e-18 | 11 |
thyroid gland | 1.35e-18 | 5 |
pharyngeal pouch | 1.35e-18 | 5 |
thyroid diverticulum | 1.35e-18 | 5 |
pharyngeal pouch 2 | 1.35e-18 | 5 |
thyroid primordium | 1.35e-18 | 5 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.90e-12 | 2 |
developing epithelial placode | 2.90e-12 | 2 |
respiratory system arterial blood vessel | 2.90e-12 | 2 |
respiratory system blood vessel | 2.90e-12 | 2 |
respiratory system artery | 2.90e-12 | 2 |
head blood vessel | 2.90e-12 | 2 |
pulmonary artery | 2.90e-12 | 2 |
pulmonary vascular system | 2.90e-12 | 2 |
pharyngeal vasculature | 2.90e-12 | 2 |
truncus arteriosus | 2.90e-12 | 2 |
aortic sac | 2.90e-12 | 2 |
pharyngeal arch artery | 2.90e-12 | 2 |
pharyngeal arch system | 1.15e-11 | 18 |
outflow tract | 1.30e-08 | 3 |