FFCP PHASE1:Hg19::chr14:60715928..60716007,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5494 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9275 | |||
|TSSclassifier=strong | |||
|UniProt=P35813 | |||
|association_with_transcript=0bp_to_ENST00000395076,NM_021003,NM_177951,uc001xex.3,uc001xey.3_5end | |||
|cluster_id=chr14:60715928..60716007,+ | |||
|coexpression_cluster_id=C3437 | |||
|description=CAGE_peak_1_at_PPM1A_5end | |||
|id=chr14:60715928..60716007,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.05e-19!140;CL:0002031!4.56e-15!124;CL:0000037!1.35e-14!172;CL:0000566!1.35e-14!172;CL:0002087!3.36e-13!119;CL:0002032!4.30e-13!165;CL:0000837!4.30e-13!165;CL:0000988!1.43e-12!182;CL:0000766!6.42e-11!76;CL:0002057!9.62e-10!42;CL:0000839!2.30e-08!70;CL:0000557!2.73e-08!71;CL:0000860!3.72e-08!45;CL:0000763!3.49e-07!112;CL:0000049!3.49e-07!112;CL:0000838!3.56e-07!52;CL:0002009!7.27e-07!65;CL:0000542!8.40e-07!53;CL:0000051!8.40e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.11e-09;33!CL:0002057;6.11e-09;33!CL:0000473;2.36e-07;39!CL:0000234;2.36e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.38e-21,136;CL:0002031,2.62e-16,120;CL:0000037,1.43e-15,168;CL:0002087,2.33e-14,115;CL:0002032,5.06e-14,161;CL:0000837,5.06e-14,161;CL:0000988,7.28e-14,177;CL:0000766,2.67e-12,72;CL:0000860,9.62e-10,42;CL:0002057,9.62e-10,42;CL:0000839,1.47e-09,66;CL:0000557,1.82e-09,67;CL:0000473,2.36e-09,48;CL:0000234,2.36e-09,48;CL:0000763,5.83e-08,108;CL:0000049,5.83e-08,108;CL:0002009,6.04e-08,61;CL:0002194,1.12e-07,59;CL:0000576,1.12e-07,59;CL:0000040,1.12e-07,59;CL:0000559,1.12e-07,59;CL:0000838,3.56e-07,52;CL:0000542,8.40e-07,53;CL:0000051,8.40e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.24e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.13e-44!115;UBERON:0001049!6.94e-15!57;UBERON:0005068!6.94e-15!57;UBERON:0006241!6.94e-15!57;UBERON:0007135!6.94e-15!57;UBERON:0003080!9.70e-14!42;UBERON:0002780!2.09e-13!41;UBERON:0001890!2.09e-13!41;UBERON:0006240!2.09e-13!41;UBERON:0002390!1.42e-12!102;UBERON:0003061!1.42e-12!102;UBERON:0002616!3.34e-12!59;UBERON:0001017!1.54e-11!82;UBERON:0002619!1.85e-11!22;UBERON:0001893!2.03e-11!34;UBERON:0002020!4.56e-11!34;UBERON:0003528!4.56e-11!34;UBERON:0001950!5.08e-11!20;UBERON:0001869!6.78e-11!32;UBERON:0002791!7.26e-11!33;UBERON:0005743!1.03e-10!86;UBERON:0000073!1.67e-10!94;UBERON:0001016!1.67e-10!94;UBERON:0000955!1.90e-10!69;UBERON:0006238!1.90e-10!69;UBERON:0002193!2.61e-09!112;UBERON:0000956!6.95e-09!25;UBERON:0000203!6.95e-09!25;UBERON:0003075!1.86e-08!86;UBERON:0007284!1.86e-08!86;UBERON:0002346!2.51e-08!90;UBERON:0000178!4.37e-08!15;UBERON:0000179!4.37e-08!15;UBERON:0000463!4.37e-08!15;UBERON:0003056!4.50e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.62e-12;114!UBERON:0002619;1.62e-11;22!UBERON:0001950;4.71e-11;20!UBERON:0002780;7.26e-10;41!UBERON:0001890;7.26e-10;41!UBERON:0001893;7.68e-10;34!UBERON:0001869;8.21e-10;32!UBERON:0003528;1.67e-09;34!UBERON:0002020;1.67e-09;34!UBERON:0002791;1.81e-09;32!UBERON:0000956;7.02e-09;25!UBERON:0000203;7.02e-09;25!UBERON:0000073;1.24e-08;53!UBERON:0002616;1.24e-08;53!UBERON:0000178;4.25e-08;15!UBERON:0000179;4.25e-08;15!UBERON:0000463;4.25e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.85e-44,114;UBERON:0001049,1.49e-14,56;UBERON:0005068,1.49e-14,56;UBERON:0006241,1.49e-14,56;UBERON:0007135,1.49e-14,56;UBERON:0000073,2.75e-14,53;UBERON:0002616,2.75e-14,53;UBERON:0002390,8.06e-14,98;UBERON:0003061,8.06e-14,98;UBERON:0002780,2.09e-13,41;UBERON:0001890,2.09e-13,41;UBERON:0003080,2.09e-13,41;UBERON:0006240,2.09e-13,41;UBERON:0002619,1.85e-11,22;UBERON:0001893,2.03e-11,34;UBERON:0001017,3.02e-11,81;UBERON:0003528,4.56e-11,34;UBERON:0002020,4.56e-11,34;UBERON:0001950,5.08e-11,20;UBERON:0001016,5.70e-11,89;UBERON:0001869,6.78e-11,32;UBERON:0002791,1.69e-10,32;UBERON:0002193,3.01e-10,108;UBERON:0000955,3.72e-10,68;UBERON:0006238,3.72e-10,68;UBERON:0003075,4.77e-09,82;UBERON:0007284,4.77e-09,82;UBERON:0002346,6.89e-09,86;UBERON:0000956,6.95e-09,25;UBERON:0000203,6.95e-09,25;UBERON:0000178,4.37e-08,15;UBERON:0000179,4.37e-08,15;UBERON:0000463,4.37e-08,15;UBERON:0002371,1.97e-07,76;UBERON:0001474,2.83e-07,82;UBERON:0003056,3.38e-07,61 | |||
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| |||
|short_description=p1@PPM1A | |||
}} |
Latest revision as of 20:37, 24 September 2015
Short description: | p1@PPM1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PPM1A_5end |
Coexpression cluster: | C3437_Whole_blood_Neutrophils_Eosinophils_parietal_occipital_breast |
Association with transcript: | 0bp_to_ENST00000395076, NM_021003, NM_177951, uc001xex.3, uc001xey.3_5end |
EntrezGene: | PPM1A |
HGNC: | 9275 |
UniProt: | P35813 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.38e-21 | 136 |
hematopoietic lineage restricted progenitor cell | 2.62e-16 | 120 |
hematopoietic stem cell | 1.43e-15 | 168 |
nongranular leukocyte | 2.33e-14 | 115 |
hematopoietic oligopotent progenitor cell | 5.06e-14 | 161 |
hematopoietic multipotent progenitor cell | 5.06e-14 | 161 |
hematopoietic cell | 7.28e-14 | 177 |
myeloid leukocyte | 2.67e-12 | 72 |
classical monocyte | 9.62e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.62e-10 | 42 |
myeloid lineage restricted progenitor cell | 1.47e-09 | 66 |
granulocyte monocyte progenitor cell | 1.82e-09 | 67 |
defensive cell | 2.36e-09 | 48 |
phagocyte | 2.36e-09 | 48 |
myeloid cell | 5.83e-08 | 108 |
common myeloid progenitor | 5.83e-08 | 108 |
macrophage dendritic cell progenitor | 6.04e-08 | 61 |
monopoietic cell | 1.12e-07 | 59 |
monocyte | 1.12e-07 | 59 |
monoblast | 1.12e-07 | 59 |
promonocyte | 1.12e-07 | 59 |
lymphoid lineage restricted progenitor cell | 3.56e-07 | 52 |
lymphocyte | 8.40e-07 | 53 |
common lymphoid progenitor | 8.40e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.85e-44 | 114 |
neural tube | 1.49e-14 | 56 |
neural rod | 1.49e-14 | 56 |
future spinal cord | 1.49e-14 | 56 |
neural keel | 1.49e-14 | 56 |
regional part of nervous system | 2.75e-14 | 53 |
regional part of brain | 2.75e-14 | 53 |
hematopoietic system | 8.06e-14 | 98 |
blood island | 8.06e-14 | 98 |
regional part of forebrain | 2.09e-13 | 41 |
forebrain | 2.09e-13 | 41 |
anterior neural tube | 2.09e-13 | 41 |
future forebrain | 2.09e-13 | 41 |
regional part of cerebral cortex | 1.85e-11 | 22 |
telencephalon | 2.03e-11 | 34 |
central nervous system | 3.02e-11 | 81 |
brain grey matter | 4.56e-11 | 34 |
gray matter | 4.56e-11 | 34 |
neocortex | 5.08e-11 | 20 |
nervous system | 5.70e-11 | 89 |
cerebral hemisphere | 6.78e-11 | 32 |
regional part of telencephalon | 1.69e-10 | 32 |
hemolymphoid system | 3.01e-10 | 108 |
brain | 3.72e-10 | 68 |
future brain | 3.72e-10 | 68 |
neural plate | 4.77e-09 | 82 |
presumptive neural plate | 4.77e-09 | 82 |
neurectoderm | 6.89e-09 | 86 |
cerebral cortex | 6.95e-09 | 25 |
pallium | 6.95e-09 | 25 |
blood | 4.37e-08 | 15 |
haemolymphatic fluid | 4.37e-08 | 15 |
organism substance | 4.37e-08 | 15 |
bone marrow | 1.97e-07 | 76 |
bone element | 2.83e-07 | 82 |
pre-chordal neural plate | 3.38e-07 | 61 |