FFCP PHASE1:Hg19::chr14:50360356..50360379,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=382 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=659 | |||
|TSSclassifier=strong | |||
|UniProt=P62330 | |||
|association_with_transcript=-8bp_to_AF047432_5end | |||
|cluster_id=chr14:50360356..50360379,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_10_at_ARF6_5end | |||
|id=chr14:50360356..50360379,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.78e-29!42;CL:0000738!1.84e-28!140;CL:0000860!5.03e-27!45;CL:0002031!8.85e-27!124;CL:0002087!2.06e-25!119;CL:0000557!3.22e-23!71;CL:0002009!2.85e-22!65;CL:0000839!3.29e-22!70;CL:0002194!2.86e-21!63;CL:0000576!2.86e-21!63;CL:0000040!2.86e-21!63;CL:0000559!2.86e-21!63;CL:0000988!4.00e-21!182;CL:0000766!4.16e-21!76;CL:0000037!5.28e-19!172;CL:0000566!5.28e-19!172;CL:0002032!1.47e-17!165;CL:0000837!1.47e-17!165;CL:0000763!1.36e-12!112;CL:0000049!1.36e-12!112;CL:0000134!4.12e-08!358;CL:0002320!7.73e-08!365;CL:0002393!1.25e-07!9;CL:0002397!1.25e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.38e-53;33!CL:0002057;4.38e-53;33!CL:0000576;1.24e-40;48!CL:0000473;5.95e-36;39!CL:0000234;5.95e-36;39!CL:0000766;4.09e-27;69!CL:0002087;3.66e-14;104!CL:0002393;3.51e-13;6!CL:0002397;3.51e-13;6!CL:0000738;3.16e-11;136!CL:0000763;2.08e-10;100!CL:0000875;1.86e-08;3!CL:0002396;1.86e-08;3!CL:0000767;1.28e-07;3!CL:0000988;3.86e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.02e-77,42;CL:0002057,1.02e-77,42;CL:0000473,2.00e-66,48;CL:0000234,2.00e-66,48;CL:0000766,4.56e-52,72;CL:0002009,2.52e-51,61;CL:0000557,3.81e-51,67;CL:0002194,1.22e-50,59;CL:0000576,1.22e-50,59;CL:0000040,1.22e-50,59;CL:0000559,1.22e-50,59;CL:0000839,1.84e-49,66;CL:0000738,1.88e-43,136;CL:0002031,3.51e-38,120;CL:0002087,3.52e-38,115;CL:0000988,2.91e-36,177;CL:0000763,1.85e-35,108;CL:0000049,1.85e-35,108;CL:0000037,4.55e-32,168;CL:0002032,1.74e-31,161;CL:0000837,1.74e-31,161;CL:0002393,4.36e-20,9;CL:0002397,4.36e-20,9;CL:0000134,3.51e-12,354;CL:0002320,1.27e-11,361;CL:0000219,1.14e-09,386;CL:0000048,9.08e-09,427;CL:0000034,1.71e-08,441;CL:0000875,1.85e-08,3;CL:0002396,1.85e-08,3;CL:0000723,2.04e-08,433;CL:0000767,1.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;6.42e-56;42!CL:0000049;4.10e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.43e-46,76;UBERON:0001474,7.26e-46,82;UBERON:0002390,4.12e-42,98;UBERON:0003061,4.12e-42,98;UBERON:0004765,1.27e-40,90;UBERON:0002193,6.31e-37,108;UBERON:0002405,2.82e-35,93;UBERON:0001434,3.01e-35,100;UBERON:0002204,8.22e-19,167;UBERON:0003081,1.65e-17,203;UBERON:0002384,3.70e-12,371;UBERON:0000926,3.60e-09,315;UBERON:0004120,3.60e-09,315;UBERON:0006603,3.60e-09,315 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0.618831764800233,0,0,0,0.730310090387373,0.487932798790507,0.492484232307152,0,0,0,0.136874425072884,0.125542639594803,0.993374274723366,1.14940825229924,0.708397031823113,3.54027849164014,2.30297638858328,2.63187409637329,0,0,0.739508020333575,0,0,0.293600439334847,1.66198622559563,1.60435557976113,1.30206522429511,0.447830948479849,0,0,2.18097358169347,4.53451132426571,4.12392904019288,2.32429036905685,4.93401465626191,2.78735733805593,7.48000220037591,6.91633907628572,6.14853797710322,4.13694816883942,3.22742341791913,5.41705946377367,3.01187743268168,2.45615535052061,2.47195832889593,5.20342617030534,8.02322567690234,7.03270838378945,1.9791078011203,4.78712778291916,5.11469700639233,4.35313857942876,1.70215567407342,2.4912889959823,7.03496262718881,6.77927793946262,6.29847649644838,3.02699751316684,2.94622108790052,3.79754864929061,6.12640330304631,11.6932364980774,3.56419697364239,0.561643155732475,0.600707571366025,0.32145117339416,10.2604587746849,12.3328339863436,4.74926799788048,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0.954053754535364,1.1384259382189,0,0.764546456250458,0,2.24203425192614,0.263384084775077,0.983548850569165,0.786021525498329,1.02800749499755,0.83593247695339,0.32592226663359,0,0,1.33692548262208,1.76763544484902,0.221533894583621,1.08321545506006,1.40900451698243,1.69077151827842,0.986627427622057,1.10540007114339,0.289803085735052,0,0,0,0.906474741580529,0.766440987203842,0.68725489096526,0.506039384039006,0,0,0.950452044448374,0.150575119077773,0.255973222308837,0,0.710331756132051,1.64225599384209,0.80642697289893,1.87208137048455,1.01377082717959,0,0.670700859703636,0.511450247374121,0,0,0,0,0.486634870302636,0.189069634328136,0.665188192387692,0.614843499851882,0.130979075497713,0.728590576585084,0,0.649094787309367,0.870648686496336,0.797747763113191,0.953962497221368,0,0.371457501329565,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,1.3082821564276,0,0.506522046658319,0.397227542439656,0,0,0,0,1.2333377420858,0.311211035399766,0.134710672069688,0,0,0,0.468642863667593,0.312160076830321,0,1.49448680551801,0.117434498643765,0,0.140450806702248,0.204154171254893,0,0.309977343527296,0,0.741800787835671,0,0.718618141816238,0,0.125118519871964,0,0,0.612975591598039,0.300476117813194,0.680593098960126,0.179389635688862,0.213557388818567,1.05965950579781,0.300091096084402,0.103052529238439,0.515281080091258,0,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0,0.302256294682921,0.339121184620975,0,0,0,0.243947412259191,0,0.348581828608555,0.10366105501537,0.504641701751257,0,0,0,0,0.464367928031979,0.721879481669586,0.236613600079688,0.674338760312407,0.723033089650446,0.441175890929576,0.871517776369625,0.949082476444386,0.404493924480493,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0.882926198829301,0.122988438543114,0.171567810298526,0,0,0.301586917234893,0,0.325808305310325,0,0,0.34779121492523,0.70445216541493,0,0,0,1.58040879591855,2.57545848628462,0.738651018262192,0,0.148631162288728,0.93733833986777,0.16798212819886,0.283550194484773,1.07470227243418,0.581267877027924,0,9.85326475791887,2.28925928434388,0.414656231081544,0.576479813667846,0.25248486685276,0.253991577168676,0.763976851116555,0,0,0.102827492703324,0.600686115687835,0.285826432630578,0.224262168690721,0,0.4400297149257,0.129271715757778,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,1.14861935834114,0,0.579125226670317,0.205476322550383,0.358121926479791,0.448340575974109,2.56139988262505,0.862510299438069,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0.356857977594324,0.315404830067869,0.35142424497814,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0.391602314925481,0,1.24060815673732,0.862856803274467,1.06727557803444,0.303127571446259,0,0.30239029332968,0.248107807818777,0.153461973288062,0.841980283299221,0,0,0,1.48418066444991,0.154209693802656,0.355123450626254,0.0821271560138091,0,0.232420756919918,0.241718899183244,0.200506470303285,0.276242966807689,0.114814448164607,0.182091168006717,0.131124414959424,0.902399225814824,0.539107359730903,0.784349769176855,0,0,0,0.340187410553031,0.215915916102139,0,1.62567862526312,1.00337954770971,0.764628819135115,0,0.447749509444357,0,0.261435451024901,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0.082509499920588,0,1.30012049207304,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0.107420244868274,0.580066775656914,0.255679882248303,0.0890320356467374,0.165284915360978,0,0,0.2023155617111,0,0,0.6970372701606,0,0,0,0.37064843820784,0.143124886741991,1.116475108079,0,0,1.27948895655667,0,0.318203247925937,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0.731140468893853,1.05650146756755,0.2729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| |||
|short_description=p10@ARF6 | |||
}} |
Latest revision as of 02:43, 20 September 2015
Short description: | p10@ARF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ARF6_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -8bp_to_AF047432_5end |
EntrezGene: | ARF6 |
HGNC: | 659 |
UniProt: | P62330 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.43e-46 | 76 |
bone element | 7.26e-46 | 82 |
hematopoietic system | 4.12e-42 | 98 |
blood island | 4.12e-42 | 98 |
skeletal element | 1.27e-40 | 90 |
hemolymphoid system | 6.31e-37 | 108 |
immune system | 2.82e-35 | 93 |
skeletal system | 3.01e-35 | 100 |
musculoskeletal system | 8.22e-19 | 167 |
lateral plate mesoderm | 1.65e-17 | 203 |
connective tissue | 3.70e-12 | 371 |
mesoderm | 3.60e-09 | 315 |
mesoderm-derived structure | 3.60e-09 | 315 |
presumptive mesoderm | 3.60e-09 | 315 |