FFCP PHASE1:Hg19::chr14:35120050..35120073,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:35120050..35120073,- | |||
|description=CAGE_peak_at_chr14:35120050..35120073,- | |||
|id=chr14:35120050..35120073,- | |||
|ontology_enrichment_celltype=CL:0000055!9.63e-28!180;CL:0000222!2.93e-23!119;CL:0000680!2.15e-21!57;CL:0000056!2.15e-21!57;CL:0000355!2.15e-21!57;CL:0000187!1.90e-20!54;CL:0000183!4.97e-19!59;CL:0000192!1.51e-17!42;CL:0000514!1.51e-17!42;CL:0000144!1.55e-17!625;CL:0000548!3.25e-17!679;CL:0000004!3.25e-17!679;CL:0000255!3.25e-17!679;CL:0000012!9.03e-17!682;CL:0000393!1.18e-16!60;CL:0000211!1.18e-16!60;CL:0000359!1.11e-15!32;CL:0000220!2.02e-15!246;CL:0002321!5.29e-15!248;CL:0000057!1.00e-14!75;CL:0002371!1.27e-13!591;CL:0000003!2.89e-11!722;CL:0000077!1.32e-08!19;CL:0002620!3.91e-08!23;CL:0002539!2.01e-07!10;CL:0000723!2.35e-07!436;CL:0000048!3.12e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000077;2.30e-09;19!CL:0000188;1.49e-07;9!CL:0000187;1.83e-07;55!CL:0000359;2.20e-07;32!CL:0000723;4.28e-07;61!CL:0000594;8.65e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.27e-12,121;CL:0000187,1.35e-11,55;CL:0000680,1.06e-10,58;CL:0000056,1.06e-10,58;CL:0000355,1.06e-10,58;CL:0000393,6.74e-10,61;CL:0000211,6.74e-10,61;CL:0000077,1.09e-09,19;CL:0000192,7.15e-08,43;CL:0000514,7.15e-08,43;CL:0000359,8.67e-08,32;CL:0000188,1.54e-07,9;CL:0000594,7.61e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.31e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.89e-16;14!DOID:120;7.51e-09;27!DOID:193;4.84e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.59e-16,14;DOID:120,6.86e-09,27;DOID:193,4.46e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.91e-22!83;UBERON:0002329!2.91e-22!83;UBERON:0003077!2.91e-22!83;UBERON:0003059!2.91e-22!83;UBERON:0007282!2.91e-22!83;UBERON:0009618!2.91e-22!83;UBERON:0007285!2.91e-22!83;UBERON:0000486!1.09e-20!82;UBERON:0004290!2.11e-20!70;UBERON:0001134!9.10e-19!61;UBERON:0002036!9.10e-19!61;UBERON:0003082!9.10e-19!61;UBERON:0002385!1.36e-17!63;UBERON:0001015!1.36e-17!63;UBERON:0000383!1.36e-17!63;UBERON:0005256!5.90e-15!143;UBERON:0000490!1.07e-12!138;UBERON:0002049!1.87e-12!79;UBERON:0007798!1.87e-12!79;UBERON:0002100!3.03e-11!216;UBERON:0001637!3.04e-11!42;UBERON:0003509!3.04e-11!42;UBERON:0004572!3.04e-11!42;UBERON:0004573!6.17e-10!33;UBERON:0004571!6.17e-10!33;UBERON:0001981!7.41e-10!60;UBERON:0007500!7.41e-10!60;UBERON:0004537!7.41e-10!60;UBERON:0006965!7.41e-10!60;UBERON:0000055!2.19e-09!69;UBERON:0004872!9.89e-09!84;UBERON:0004535!3.00e-08!110;UBERON:0001009!1.31e-07!113;UBERON:0004237!2.01e-07!10;UBERON:0004695!2.01e-07!10;UBERON:0002111!2.01e-07!10;UBERON:0004178!2.01e-07!10;UBERON:0000475!3.16e-07!365;UBERON:0003914!6.13e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;9.62e-11;5!UBERON:0000992;2.23e-09;13!UBERON:0010260;2.00e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.25e-11,78;UBERON:0002329,8.11e-11,71;UBERON:0003059,8.11e-11,71;UBERON:0007282,8.11e-11,71;UBERON:0004290,8.11e-11,71;UBERON:0009618,8.11e-11,71;UBERON:0002118,1.17e-10,5;UBERON:0003077,1.41e-10,72;UBERON:0007285,1.41e-10,72;UBERON:0007524,2.41e-10,73;UBERON:0000486,4.24e-10,83;UBERON:0001134,1.20e-09,62;UBERON:0002036,1.20e-09,62;UBERON:0003082,1.20e-09,62;UBERON:0000992,2.46e-09,13;UBERON:0002385,3.56e-09,64;UBERON:0001015,3.56e-09,64;UBERON:0000383,3.56e-09,64;UBERON:0005256,5.81e-09,122;UBERON:0003104,7.89e-08,160;UBERON:0009142,7.89e-08,160;UBERON:0010260,1.93e-07,9;UBERON:0000490,3.11e-07,148 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0.990130823680373,0.662794751455832,3.36162573225888,1.20538905604795,0.730310090387373,0.975865597581014,0,0,0,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0.895661896959697,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,1.00267582127178,0.434539556882471,0,0,0.0945348171640679,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,1.03366703667732,0.35576626268671,0,0,0,0,0.735326160691737,0,1.16089646769304,0.44905874525234,0.337834441449967,0,0,0.183201743930407,0,0,0,1.49091585508596,0.379891534993739,0.794455084879313,0.286836620748814,0.354668382198357,0,0,0,0.622422070799533,1.21239604862719,0.163461903113459,0.302714855289863,0.576175924479999,0.937285727335186,2.49728061464256,0,0.448346041655403,1.29177948508141,0.809364721840658,0.702254033511242,1.83738754129404,0.737005903870608,0.516628905878827,1.18800285728205,0,0.910161361938026,0,0.336672227908132,0.500474079487857,1.10825646193673,0,0.612975591598039,0.45071417671979,0.567160915800105,1.07633781413317,0.427114777637135,0.635795703478686,0.300091096084402,0.824420233907511,1.28820270022815,1.11670113798954,0,0.292311015483596,0.504867548488229,0.552299391853796,0.323292113637624,0.355009592516614,0.906768884048762,0.67824236924195,0.966304265816484,1.36373060295417,0.286804595389004,0,0,0,0,0,0,3.12899064659632,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,1.88724591328378,0.658501712451753,0,0.201057944823262,0.0925884451585296,0,0,1.44331342025273,0,1.05667824812239,0,0,0.190254152234598,0,0,0.246217006087397,0,0.594524649154913,0,0.839910640994298,1.27597587518148,0.626909658919938,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23344192779897,1.74384027533312,1.7601188597028,0.387815147273333,0,2.535908257668,1.59562869950922,3.12022310734098,1.28603687131071,0,0.266422179016099,0.285955987316295,0,0,2.28015329005615,0.355391948742546,0,3.91871190177462,2.61460037580088,2.69927076191554,0,0,0,0.718874566474748,1.14861935834114,0,0.723906533337896,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,1.00034104211935,0.542530047399471,1.03985430765404,0.356857977594324,0.315404830067869,0.234282829985426,0.300946099727719,0,0,0,0.368738337083406,0.434418072340414,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.460385919864187,0,0.256278298511402,0.511707249066704,0.160853921143607,0,0.771048469013278,0.710246901252508,0.328508624055237,2.07701771673448,0.464841513839837,0,0.200506470303285,0.0920809889358963,0.114814448164607,0.728364672026868,0.262248829918848,0,0,0,0,0.73886140225013,1.13733384070897,0.510281115829547,1.72732732881711,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0,0.574265537996172,0,0,0.290012154876366,1.07834031980251,1.68854042198743,2.20538515975249,4.40423003959922,1.16013355131383,1.70453254832202,0.445160178233687,0.661139661443912,0,0.382838137483752,0.10115778085555,1.39453664789186,0.94443704049192,0.6970372701606,0.616067160352178,0.532306030317022,2.60979897622522,0.9266210955196,0.715624433709956,1.86079184679834,0.632758849437452,2.09693213316207,0.255897791311334,0,0,0.78494864019923,0,0.54907405947211,0.942499218765491,0.404364963146632,0,0.421258456238981,0,1.21856744815642,2.11300293513511,1.09199929126389,0.141405431953713,0,0.551365343546124,0.66343897524122,0.876901770507525,0.578775534266688,1.31178950409327,2.23201414658974,0.92947049429925,1.12678241012897,1.72093622644862,1.3754865741837,2.85336841185,1.06428319221179,0.633322905892992,0.329294892959902,0,2.44954304171488,0.48111056362756,0.670302275535787,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84136146806413,0,0,0,0,0,13.6909707178174,0,0,0,0,0,0.102268682502155,0,0.933118762985422,0.179736702294654,0,0,0,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93701494939902,0,0,0.108647371922008,0,0.732780747214898,0,0,0,0,0,0,0,0,0,0.210998064528027,4.24405301213784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0.664653872707185,1.65495977937749,0,0,0.569219092059585,0.138674673013139,0,0,0.0870592065804026,0,0,0,0.219267951258557,0.328461828212837,0,0,0,4.38534158869603,1.58971689362392,0,0,3.36667045056442,0,0,0,0,0,0,0.49701014226173,0,0.67952103036807,0.627617077873999,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.65282120072261,0,0,0,0,0,0.542999601753713,1.72844298240254,1.63293680054705,0,0,1.02232813071253,0.226624183040251,0.293104467356165,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0.6383412577701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| |||
|short_description=p@chr14:35120050..35120073,- | |||
}} |
Latest revision as of 20:16, 24 July 2015
Short description: | p@chr14:35120050..35120073, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:35120050..35120073, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.27e-12 | 121 |
muscle cell | 1.35e-11 | 55 |
muscle precursor cell | 1.06e-10 | 58 |
myoblast | 1.06e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.06e-10 | 58 |
electrically responsive cell | 6.74e-10 | 61 |
electrically active cell | 6.74e-10 | 61 |
mesothelial cell | 1.09e-09 | 19 |
smooth muscle cell | 7.15e-08 | 43 |
smooth muscle myoblast | 7.15e-08 | 43 |
vascular associated smooth muscle cell | 8.67e-08 | 32 |
cell of skeletal muscle | 1.54e-07 | 9 |
skeletal muscle satellite cell | 7.61e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 3.25e-11 | 78 |
somite | 8.11e-11 | 71 |
presomitic mesoderm | 8.11e-11 | 71 |
presumptive segmental plate | 8.11e-11 | 71 |
dermomyotome | 8.11e-11 | 71 |
trunk paraxial mesoderm | 8.11e-11 | 71 |
right ovary | 1.17e-10 | 5 |
paraxial mesoderm | 1.41e-10 | 72 |
presumptive paraxial mesoderm | 1.41e-10 | 72 |
dense mesenchyme tissue | 2.41e-10 | 73 |
multilaminar epithelium | 4.24e-10 | 83 |
skeletal muscle tissue | 1.20e-09 | 62 |
striated muscle tissue | 1.20e-09 | 62 |
myotome | 1.20e-09 | 62 |
female gonad | 2.46e-09 | 13 |
muscle tissue | 3.56e-09 | 64 |
musculature | 3.56e-09 | 64 |
musculature of body | 3.56e-09 | 64 |
trunk mesenchyme | 5.81e-09 | 122 |
mesenchyme | 7.89e-08 | 160 |
entire embryonic mesenchyme | 7.89e-08 | 160 |
umbilical blood vessel | 1.93e-07 | 9 |
unilaminar epithelium | 3.11e-07 | 148 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.59e-16 | 14 |
female reproductive organ cancer | 6.86e-09 | 27 |
reproductive organ cancer | 4.46e-08 | 29 |