FFCP PHASE1:Hg19::chr8:16859835..16859861,-: Difference between revisions
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|id=chr8:16859835..16859861,-
|short_description=p1@FGF20
|description=CAGE_peak_1_at_FGF20_5end
|association_with_transcript=-145bp_to_ENST00000180166_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26281 | |EntrezGene=26281 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3677 | |HGNC=3677 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NP95 | |UniProt=Q9NP95 | ||
|association_with_transcript=-145bp_to_ENST00000180166_5end | |||
|cluster_id=chr8:16859835..16859861,- | |||
|coexpression_cluster_id=C112 | |||
|description=CAGE_peak_1_at_FGF20_5end | |||
|id=chr8:16859835..16859861,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000322;1.10e-09;3!CL:0000214;1.67e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.10e-09,3;CL:0000214,1.67e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.26e-25;1!UBERON:0003056;1.81e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;3.58e-26;1!DOID:1357;3.58e-26;1!DOID:1325;3.06e-15;7!DOID:3904;3.06e-15;7!DOID:0050615;1.01e-14;16!DOID:3910;7.30e-14;2!DOID:3905;4.42e-12;9!DOID:1324;1.27e-07;15!DOID:5409;1.59e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.58e-26,1;DOID:1357,3.58e-26,1;DOID:1325,3.06e-15,7;DOID:3904,3.06e-15,7;DOID:0050615,1.01e-14,16;DOID:3910,7.30e-14,2;DOID:3905,4.42e-12,9;DOID:1324,1.27e-07,15;DOID:5409,1.59e-07,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001764;3.58e-26;1!UBERON:0001825;3.58e-26;1!UBERON:0000941;1.26e-25;1!UBERON:0001785;1.26e-25;1!UBERON:0002464;1.26e-25;1!UBERON:0004904;1.26e-25;1!UBERON:0001021;1.26e-25;1!UBERON:0004903;7.30e-14;2!UBERON:0002173;7.30e-14;2!UBERON:0002186;7.30e-14;2!UBERON:0003714;1.55e-13;2!UBERON:0005162;1.55e-13;2!UBERON:0000122;1.55e-13;2!UBERON:0004821;1.10e-09;3!UBERON:0007499;1.10e-09;3!UBERON:0003215;1.10e-09;3!UBERON:0010368;1.10e-09;3!UBERON:0009911;1.10e-09;3!UBERON:0002299;1.10e-09;3!UBERON:0006524;1.10e-09;3!UBERON:0008874;1.10e-09;3!UBERON:0002169;1.10e-09;3!UBERON:0004894;1.10e-09;3!UBERON:0006915;1.67e-09;3!UBERON:0007616;1.67e-09;3!UBERON:0002217;1.67e-09;3!UBERON:0002018;1.67e-09;3!UBERON:0009856;1.40e-07;4 | |||
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|short_description=p1@FGF20 | |||
}} | }} |
Latest revision as of 03:41, 17 September 2015
Short description: | p1@FGF20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FGF20_5end |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | -145bp_to_ENST00000180166_5end |
EntrezGene: | FGF20 |
HGNC: | 3677 |
UniProt: | Q9NP95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.10e-09 | 3 |
synovial cell | 1.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 3.58e-26 | 1 |
paranasal sinus | 3.58e-26 | 1 |
cranial nerve II | 1.26e-25 | 1 |
cranial nerve | 1.26e-25 | 1 |
nerve trunk | 1.26e-25 | 1 |
nerve connecting eye with brain | 1.26e-25 | 1 |
nerve | 1.26e-25 | 1 |
retinal neural layer | 1.26e-25 | 1 |
presumptive neural retina | 1.26e-25 | 1 |
bronchoalveolar duct junction | 7.30e-14 | 2 |
alveolar duct | 7.30e-14 | 2 |
bronchiole | 7.30e-14 | 2 |
neural tissue | 1.55e-13 | 2 |
multi cell component structure | 1.55e-13 | 2 |
neuron projection bundle | 1.55e-13 | 2 |
pulmonary alveolus epithelium | 1.10e-09 | 3 |
alveolus | 1.10e-09 | 3 |
pulmonary lobule | 1.10e-09 | 3 |
lobule | 1.10e-09 | 3 |
alveolus of lung | 1.10e-09 | 3 |
alveolar system | 1.10e-09 | 3 |
pulmonary acinus | 1.10e-09 | 3 |
alveolar sac | 1.10e-09 | 3 |
alveolar wall | 1.10e-09 | 3 |
stratified squamous epithelium | 1.67e-09 | 3 |
layer of synovial tissue | 1.67e-09 | 3 |
synovial joint | 1.67e-09 | 3 |
synovial membrane of synovial joint | 1.67e-09 | 3 |
layer of retina | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.58e-26 | 1 |
maxillary sinus cancer | 3.58e-26 | 1 |
bronchus cancer | 3.06e-15 | 7 |
bronchogenic carcinoma | 3.06e-15 | 7 |
respiratory system cancer | 1.01e-14 | 16 |
lung adenocarcinoma | 7.30e-14 | 2 |
lung carcinoma | 4.42e-12 | 9 |
lung cancer | 1.27e-07 | 15 |
lung small cell carcinoma | 1.59e-07 | 4 |