FFCP PHASE1:Hg19::chr13:99640713..99640716,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:99640713..99640716,- | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_at_chr13:99640713..99640716,- | |||
|id=chr13:99640713..99640716,- | |||
|ontology_enrichment_celltype=CL:0002537!2.23e-14!5 | |||
|ontology_enrichment_celltype_v019=CL:0002537;3.42e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,3.26e-11,5 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.81e-40;5 | |||
|ontology_enrichment_disease=DOID:3111!6.16e-09!1;DOID:3603!6.16e-09!1;DOID:630!7.18e-09!1;DOID:0050177!7.18e-09!1;DOID:0050427!7.18e-09!1;DOID:2355!1.91e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!4.31e-16!2;UBERON:0005631!2.39e-13!14;UBERON:0000158!2.39e-13!14;UBERON:0000305!2.04e-10!7;UBERON:0004871!3.56e-09!8;UBERON:0001736!5.28e-09!1;UBERON:0006298!5.28e-09!1;UBERON:0000478!1.06e-07!24;UBERON:0004923!2.60e-07!57;UBERON:0003408!3.13e-07!10;UBERON:0002046!3.34e-07!5;UBERON:0004117!3.34e-07!5;UBERON:0007689!3.34e-07!5;UBERON:0007123!3.34e-07!5;UBERON:0003091!3.34e-07!5;UBERON:0000974!3.49e-07!10;UBERON:0009722!9.90e-07!11;UBERON:0007690!9.90e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.81e-40;5!UBERON:0000341;8.10e-26;2!UBERON:0000974;1.50e-09;6!UBERON:0000305;2.26e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.81e-40,5;UBERON:0004117,1.81e-40,5;UBERON:0007689,1.81e-40,5;UBERON:0007123,1.81e-40,5;UBERON:0003091,1.81e-40,5;UBERON:0000341,9.18e-26,2;UBERON:0009722,4.28e-19,11;UBERON:0007690,4.28e-19,11;UBERON:0008814,4.07e-12,18;UBERON:0000305,2.18e-08,7;UBERON:0004871,1.69e-07,8;UBERON:0002368,9.98e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,0.296964680832639,0.921482106297696,0,0,0,0,0.844501632511974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.236417121897595,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,1.1903221573187,0,0.0620747142958579,0,2.03670906490128,3.84022659020617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr13:99640713..99640716,- | |||
}} |
Latest revision as of 17:42, 24 July 2015
Short description: | p@chr13:99640713..99640716, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:99640713..99640716, - |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 3.26e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.81e-40 | 5 |
pharyngeal pouch | 1.81e-40 | 5 |
thyroid diverticulum | 1.81e-40 | 5 |
pharyngeal pouch 2 | 1.81e-40 | 5 |
thyroid primordium | 1.81e-40 | 5 |
throat | 9.18e-26 | 2 |
entire pharyngeal arch endoderm | 4.28e-19 | 11 |
early pharyngeal endoderm | 4.28e-19 | 11 |
pharyngeal arch system | 4.07e-12 | 18 |
amnion | 2.18e-08 | 7 |
somatic layer of lateral plate mesoderm | 1.69e-07 | 8 |
endocrine gland | 9.98e-07 | 35 |