FFCP PHASE1:Hg19::chr13:76413879..76413884,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=350bp_to_ENST00000533809_5end | |||
|cluster_id=chr13:76413879..76413884,+ | |||
|description=CAGE_peak_33_at_LMO7_5end | |||
|id=chr13:76413879..76413884,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;5.51e-09;1!CL:0002625;5.51e-09;1!CL:0000222;5.51e-09;1!CL:0000216;5.51e-09;1!CL:0002616;5.51e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,3.05e-09,1;CL:0000511,3.58e-09,1;CL:0002625,3.58e-09,1;CL:0000216,3.58e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease_v019=DOID:1192;1.69e-11;3!DOID:3369;1.60e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,1.66e-11,3;DOID:3369,1.60e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;5.51e-09;1!UBERON:0001343;5.51e-09;1!UBERON:0002171;5.51e-09;1!UBERON:0006518;5.51e-09;1!UBERON:0008949;5.51e-09;1!UBERON:0004910;5.51e-09;1!UBERON:0000101;5.51e-09;1!UBERON:0004813;5.51e-09;1!UBERON:0002167;5.51e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,3.58e-09,1;UBERON:0001343,3.58e-09,1;UBERON:0004910,3.58e-09,1;UBERON:0005154,3.58e-09,1;UBERON:0005295,3.58e-09,1;UBERON:0004813,3.58e-09,1;UBERON:0005297,3.58e-09,1;UBERON:0005294,3.58e-09,1;UBERON:0010141,3.58e-09,1;UBERON:0005891,3.58e-09,1;UBERON:0002171,7.85e-09,1;UBERON:0006518,7.85e-09,1;UBERON:0008949,7.85e-09,1;UBERON:0000101,7.85e-09,1;UBERON:0002167,7.85e-09,1 | |||
|phase1_expression=1.45342703416445,0.428201047781966,0.140954404095971,0,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0.196709770113833,0,0,0,0.32592226663359,0.946895611469467,0,0,0,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0,0.722878304769133,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0,0.175669571386252,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96971951695318,0.759783069987479,0.529636723252875,0.860509862246441,0.354668382198357,0,0,0,0,0.404132016209064,0,0.151357427644931,0,0,0,0,0,0,0,0.140450806702248,0.408308342509787,0.491337269247072,0,0,0,0,0,0,0,0,0.438977620880838,0.612975591598039,0.300476117813194,0,3.7671823494661,0.85422955527427,0,0.600182192168805,0.515262646192195,3.09168648054755,0.18611685633159,2.53164498361899,0.487185025805993,1.26216887122057,0.276149695926898,0.161646056818812,0.710019185033229,0.705264687593482,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0.337169380156203,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.517086863031111,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0.579125226670317,0.821905290201534,0.179060963239896,0.112085143993527,0,0,0.128343036279748,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0.831883446123229,1.60586089917446,1.26161932027148,0.468565659970853,0,0,1.03473071292505,0.664225598535437,0,0.173767228936166,0.195801157462741,0,0.206768026122887,0,0,0,0,0,0.744323423456331,3.6830873589135,0.561320188866147,0.640695746278505,0,0.321707842287215,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0.34444334449382,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.247528499761764,0,0,1.6068392984416,0.290012154876366,0,0,0,0.107420244868274,0.290033387828457,0.0852266274161009,0.267096106940212,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.818999468447914,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.844430541190656,0.658589785919804,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0.921482106297696,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0.102268682502155,0.246169610922139,0.622079175323615,0.269605053441981,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0.173624994933292,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,1.83309043480088,0,0,0.104421949505455,0,0,0.234264445725339,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.0870592065804026,0,0,0.0967563312890851,0.146178634172371,0.328461828212837,0,0.0882561266915003,0,0.274083849293502,0,0.0633107959558787,0.195551382734803,0.160317640503067,0,0,0.144090417154106,0.114536596165916,0,0.288109595976299,0.124252535565433,0.471388069233591,0.271808412147228,0.523014231561666,0.101998217636322,0,0.600420288709789,0,0,0,0,0.558564802544508,0.687481272035051,0.717873024576814,0,0,0,0.671834724867263,0.360299883542404,1.16495949527454,0.0787831823072236,0.164831716762333,0.202210631562555,0,0,0,0,0,0,0,0,0.77380195455795,0.0607495566580247,0,0.0788057072991982,0,0,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0.511164065356265,0,0,0,0,0,0.342173675768659,0,0.320362237703084,0.471612915298998,1.24271716604159,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0.1251909307065,0,0,0.0620964029413835,0,0.124980407962107,0.151649117541648,0,0.235265819698172,0.468334905806882,0,0,0,0,0.189403005275089,0,0,0,0,0,0.147855149989634,0,0,0,0,0.797525143673985,0.521745061811734,0,0,0,0,0,0,0.796191777397232,1.60011105865261,0.686791410365586,0.336749488765919,1.26184898228651,0,0.214441591374926,0,0,0,0,0.358177682162975,0,0.219284049578707,0.176689145945881,0,0,0,0.345430341731199,0,0.276516872303462,0.194860308839388,0,0,0,0,0.845248493434508,0,0,0,0,0,0.279759015438889,0,0.383683113910955,0.107824811396682,0,0,0,0,0,0.558644917973244,1.27201740261367,0.0788617450012534,0,0.705351887381368,0.3062454773532,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0,0,0,0.196295437002051,0,0,0,1.52552838186867,0,0.397832444232549,0.15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| |||
|short_description=p33@LMO7 | |||
}} |
Latest revision as of 00:23, 18 September 2015
Short description: | p33@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_LMO7_5end |
Coexpression cluster: | NA |
Association with transcript: | 350bp_to_ENST00000533809_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 3.05e-09 | 1 |
androgen binding protein secreting cell | 3.58e-09 | 1 |
seminiferous tubule epithelial cell | 3.58e-09 | 1 |
Sertoli cell | 3.58e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 3.58e-09 | 1 |
seminiferous tubule of testis | 3.58e-09 | 1 |
epithelium of male gonad | 3.58e-09 | 1 |
epithelial cord | 3.58e-09 | 1 |
sex cord | 3.58e-09 | 1 |
seminiferous tubule epithelium | 3.58e-09 | 1 |
testis sex cord | 3.58e-09 | 1 |
genital ridge | 3.58e-09 | 1 |
primitive sex cord of indifferent gonad | 3.58e-09 | 1 |
coelomic epithelium | 3.58e-09 | 1 |
lower lobe of right lung | 7.85e-09 | 1 |
right lung lobe | 7.85e-09 | 1 |
lower lobe of lung | 7.85e-09 | 1 |
lobe of lung | 7.85e-09 | 1 |
right lung | 7.85e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 1.66e-11 | 3 |
peripheral primitive neuroectodermal tumor | 1.60e-09 | 1 |