FFCP PHASE1:Hg19::chr8:145066203..145066219,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:145066203..145066219,+
|short_description=p12@GRINA
|description=CAGE_peak_12_at_GRINA_5end
|association_with_transcript=-122bp_to_ENST00000533377_5end
|E...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2907 | |EntrezGene=2907 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4589 | |HGNC=4589 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-122bp_to_ENST00000533377_5end | |||
|cluster_id=chr8:145066203..145066219,+ | |||
|description=CAGE_peak_12_at_GRINA_5end | |||
|id=chr8:145066203..145066219,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.34e-08!42;CL:0000860!6.81e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.73e-10;33!CL:0002057;7.73e-10;33!CL:0000473;1.67e-08;39!CL:0000234;1.67e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.11e-09,48;CL:0000234,2.11e-09,48;CL:0000860,1.67e-08,42;CL:0002057,1.67e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000922!1.57e-08!612;UBERON:0000468!1.58e-08!659;UBERON:0002050!7.87e-08!605;UBERON:0005423!7.87e-08!605;UBERON:0000923!1.20e-07!604;UBERON:0005291!1.20e-07!604;UBERON:0006598!1.20e-07!604;UBERON:0002532!1.20e-07!604 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000923,3.62e-07,560;UBERON:0010316,3.62e-07,560;UBERON:0005291,3.62e-07,560;UBERON:0006598,3.62e-07,560;UBERON:0010317,3.62e-07,560;UBERON:0002532,3.62e-07,560;UBERON:0002050,4.03e-07,564 | |||
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| ||
|short_description=p12@GRINA | |||
}} | }} |
Latest revision as of 00:19, 17 September 2015
Short description: | p12@GRINA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_GRINA_5end |
Coexpression cluster: | NA |
Association with transcript: | -122bp_to_ENST00000533377_5end |
EntrezGene: | GRINA |
HGNC: | 4589 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.11e-09 | 48 |
phagocyte | 2.11e-09 | 48 |
classical monocyte | 1.67e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.67e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
germ layer | 3.62e-07 | 560 |
germ layer / neural crest | 3.62e-07 | 560 |
embryonic tissue | 3.62e-07 | 560 |
presumptive structure | 3.62e-07 | 560 |
germ layer / neural crest derived structure | 3.62e-07 | 560 |
epiblast (generic) | 3.62e-07 | 560 |
embryonic structure | 4.03e-07 | 564 |