FFCP PHASE1:Hg19::chr8:144679602..144679617,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:144679602..144679617,-
|short_description=p2@EEF1D
|description=CAGE_peak_2_at_EEF1D_5end
|association_with_transcript=0bp_to_ENST00000526710_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1936 | |EntrezGene=1936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3211 | |HGNC=3211 | ||
|TSSclassifier=strong | |||
|UniProt=E9PQR8 | |UniProt=E9PQR8 | ||
|association_with_transcript=0bp_to_ENST00000526710_5end | |||
|cluster_id=chr8:144679602..144679617,- | |||
|description=CAGE_peak_2_at_EEF1D_5end | |||
|id=chr8:144679602..144679617,- | |||
|ontology_enrichment_celltype=CL:0000012!4.04e-46!682;CL:0000548!4.12e-46!679;CL:0000004!4.12e-46!679;CL:0000255!4.12e-46!679;CL:0000144!2.02e-41!625;CL:0002371!5.09e-38!591;CL:0000003!2.82e-35!722;CL:0000034!3.10e-21!444;CL:0000723!6.39e-20!436;CL:0000063!8.50e-20!578;CL:0000048!2.37e-19!430;CL:0000183!3.21e-12!59;CL:0002320!4.54e-12!365;CL:0000055!1.11e-11!180;CL:0000192!4.64e-11!42;CL:0000514!4.64e-11!42;CL:0000219!5.36e-11!390;CL:0000134!2.03e-10!358;CL:0000187!4.22e-10!54;CL:0000393!9.21e-10!60;CL:0000211!9.21e-10!60;CL:0000680!9.46e-10!57;CL:0000056!9.46e-10!57;CL:0000355!9.46e-10!57;CL:0002321!5.65e-09!248;CL:0000359!7.28e-09!32;CL:0000220!1.71e-08!246;CL:0000222!2.26e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.56e-08;32!CL:0000192;4.28e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,3.53e-21,441;CL:0000723,7.17e-20,433;CL:0000048,2.64e-19,427;CL:0002320,4.58e-12,361;CL:0000219,5.56e-11,386;CL:0000192,7.61e-11,43;CL:0000514,7.61e-11,43;CL:0000134,2.05e-10,354;CL:0000187,5.96e-10,55;CL:0000393,1.24e-09,61;CL:0000211,1.24e-09,61;CL:0000680,1.29e-09,58;CL:0000056,1.29e-09,58;CL:0000355,1.29e-09,58;CL:0002321,4.69e-09,250;CL:0000359,7.28e-09,32;CL:0000222,1.98e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;4.28e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.04e-11!167;UBERON:0002384!1.16e-10!375;UBERON:0000486!6.25e-10!82;UBERON:0000914!6.49e-10!83;UBERON:0002329!6.49e-10!83;UBERON:0003077!6.49e-10!83;UBERON:0003059!6.49e-10!83;UBERON:0007282!6.49e-10!83;UBERON:0009618!6.49e-10!83;UBERON:0007285!6.49e-10!83;UBERON:0004290!1.62e-09!70;UBERON:0001134!6.08e-08!61;UBERON:0002036!6.08e-08!61;UBERON:0003082!6.08e-08!61;UBERON:0005256!1.64e-07!143;UBERON:0002385!6.47e-07!63;UBERON:0001015!6.47e-07!63;UBERON:0000383!6.47e-07!63 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,7.50e-12,167;UBERON:0007503,1.80e-11,78;UBERON:0002384,1.18e-10,371;UBERON:0000486,7.78e-10,83;UBERON:0002329,2.08e-09,71;UBERON:0003059,2.08e-09,71;UBERON:0007282,2.08e-09,71;UBERON:0004290,2.08e-09,71;UBERON:0009618,2.08e-09,71;UBERON:0007524,4.83e-09,73;UBERON:0003077,7.48e-09,72;UBERON:0007285,7.48e-09,72;UBERON:0001134,7.66e-08,62;UBERON:0002036,7.66e-08,62;UBERON:0003082,7.66e-08,62;UBERON:0002385,7.82e-07,64;UBERON:0001015,7.82e-07,64;UBERON:0000383,7.82e-07,64 | |||
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| ||
|short_description=p2@EEF1D | |||
}} | }} |
Latest revision as of 22:43, 16 September 2015
Short description: | p2@EEF1D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EEF1D_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000526710_5end |
EntrezGene: | EEF1D |
HGNC: | 3211 |
UniProt: | E9PQR8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 3.53e-21 | 441 |
somatic stem cell | 7.17e-20 | 433 |
multi fate stem cell | 2.64e-19 | 427 |
connective tissue cell | 4.58e-12 | 361 |
motile cell | 5.56e-11 | 386 |
smooth muscle cell | 7.61e-11 | 43 |
smooth muscle myoblast | 7.61e-11 | 43 |
mesenchymal cell | 2.05e-10 | 354 |
muscle cell | 5.96e-10 | 55 |
electrically responsive cell | 1.24e-09 | 61 |
electrically active cell | 1.24e-09 | 61 |
muscle precursor cell | 1.29e-09 | 58 |
myoblast | 1.29e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.29e-09 | 58 |
embryonic cell | 4.69e-09 | 250 |
vascular associated smooth muscle cell | 7.28e-09 | 32 |
mesodermal cell | 1.98e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 7.50e-12 | 167 |
epithelial vesicle | 1.80e-11 | 78 |
connective tissue | 1.18e-10 | 371 |
multilaminar epithelium | 7.78e-10 | 83 |
somite | 2.08e-09 | 71 |
presomitic mesoderm | 2.08e-09 | 71 |
presumptive segmental plate | 2.08e-09 | 71 |
dermomyotome | 2.08e-09 | 71 |
trunk paraxial mesoderm | 2.08e-09 | 71 |
dense mesenchyme tissue | 4.83e-09 | 73 |
paraxial mesoderm | 7.48e-09 | 72 |
presumptive paraxial mesoderm | 7.48e-09 | 72 |
skeletal muscle tissue | 7.66e-08 | 62 |
striated muscle tissue | 7.66e-08 | 62 |
myotome | 7.66e-08 | 62 |
muscle tissue | 7.82e-07 | 64 |
musculature | 7.82e-07 | 64 |
musculature of body | 7.82e-07 | 64 |