FFCP PHASE1:Hg19::chr13:36432199..36432209,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-8bp_to_uc001uvi.1_5end | |||
|cluster_id=chr13:36432199..36432209,+ | |||
|description=CAGE_peak_1_at_uc001uvi.1_5end | |||
|id=chr13:36432199..36432209,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002561;5.99e-41;2!CL:0002559;4.64e-17;5!CL:0000362;6.48e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,4.89e-41,2;CL:0002559,4.28e-17,5;CL:0000362,6.20e-10,9 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.72e-27;3!UBERON:0003057;2.72e-27;3!UBERON:0003918;7.96e-09;10!UBERON:0007687;7.96e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.58e-35!115;UBERON:0005743!2.95e-19!86;UBERON:0001049!1.69e-17!57;UBERON:0005068!1.69e-17!57;UBERON:0006241!1.69e-17!57;UBERON:0007135!1.69e-17!57;UBERON:0001017!3.50e-17!82;UBERON:0000073!8.69e-17!94;UBERON:0001016!8.69e-17!94;UBERON:0003075!2.29e-16!86;UBERON:0007284!2.29e-16!86;UBERON:0003076!1.71e-15!15;UBERON:0003057!1.71e-15!15;UBERON:0002346!2.38e-15!90;UBERON:0002298!1.18e-13!8;UBERON:0002616!1.53e-11!59;UBERON:0002240!1.24e-10!3;UBERON:0000955!3.06e-10!69;UBERON:0006238!3.06e-10!69;UBERON:0006331!7.86e-10!3;UBERON:0004121!1.51e-09!169;UBERON:0000988!2.09e-09!3;UBERON:0000924!3.69e-09!173;UBERON:0006601!3.69e-09!173;UBERON:0004733!1.02e-08!12;UBERON:0002028!1.02e-08!12;UBERON:0007277!1.02e-08!12;UBERON:0002308!4.67e-08!9;UBERON:0000125!4.67e-08!9;UBERON:0004732!5.48e-08!13;UBERON:0000153!1.14e-07!129;UBERON:0007811!1.14e-07!129;UBERON:0000033!1.59e-07!123;UBERON:0002780!1.88e-07!41;UBERON:0001890!1.88e-07!41;UBERON:0006240!1.88e-07!41;UBERON:0003080!3.20e-07!42;UBERON:0002148!9.83e-07!2;UBERON:0009662!9.83e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0005933;5.99e-41;2!UBERON:0005942;5.99e-41;2!UBERON:0005932;5.99e-41;2!UBERON:0002240;2.72e-27;3!UBERON:0005174;2.72e-27;3!UBERON:0001137;2.72e-27;3!UBERON:0002038;1.88e-21;1!UBERON:0009661;1.88e-21;1!UBERON:0002950;1.88e-21;1!UBERON:0001891;1.88e-21;1!UBERON:0007195;6.31e-21;1!UBERON:0002073;4.64e-17;5!UBERON:0000489;2.94e-11;29!UBERON:0001896;5.54e-08;3!UBERON:0005290;5.54e-08;3!UBERON:0002106;7.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,4.89e-41,2;UBERON:0005942,4.89e-41,2;UBERON:0005932,4.89e-41,2;UBERON:0002240,2.08e-27,3;UBERON:0005174,2.08e-27,3;UBERON:0001137,2.08e-27,3;UBERON:0002038,1.88e-21,1;UBERON:0009661,1.88e-21,1;UBERON:0002950,1.88e-21,1;UBERON:0001891,1.88e-21,1;UBERON:0009616,1.88e-21,1;UBERON:0010286,1.88e-21,1;UBERON:0007195,7.72e-21,1;UBERON:0002073,4.28e-17,5;UBERON:0005086,4.28e-17,5;UBERON:0003076,1.35e-12,15;UBERON:0003057,1.35e-12,15;UBERON:0000489,1.45e-10,31;UBERON:0001896,5.93e-08,3;UBERON:0005290,5.93e-08,3;UBERON:0010096,5.93e-08,3;UBERON:0002106,7.26e-08,3;UBERON:0004854,7.26e-08,3;UBERON:0009034,7.26e-08,3;UBERON:0002095,7.26e-08,3;UBERON:0004782,7.26e-08,3;UBERON:0003281,7.26e-08,3;UBERON:0009664,7.26e-08,3;UBERON:0002296,7.26e-08,3;UBERON:0005602,7.26e-08,3;UBERON:0001179,7.26e-08,3;UBERON:0006293,7.26e-08,3;UBERON:0010371,9.16e-07,104 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0,0.252320850875628,0.36497735907583,0,0,0,2.78620756819187,4.33127689001751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552896299656123,0,0.219385397153973,0,0,0.461701551022782,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0,0.415440338029185,0,0,0,0,1.02447419488958,1.41627387964495,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,2.21858103073705,0.869349641179368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0,0.266107110487916,0,0,0.339848664884159,0,0,0,0.313972371402056,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,2.37637120261669,1.6906229103336,0,0.939839179798536,1.28915775947154,0,0,0,0,0,0,3.01013124618048,0,0,0,0,0,0,0,0.252332849670158,0,0,0.203977659483963,0,0.18378979906969,0,0.682008283964155,0.267964130156178,0,0.620597975171371,0,0,0,0.0620747142958579,0,0,0,0.435433495793923,0,0.134704106029175,0.717222053926764,0,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | |||
|short_description=p1@uc001uvi.1 | |||
}} |
Latest revision as of 15:47, 24 July 2015
Short description: | p1@uc001uvi.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001uvi.1_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_uc001uvi.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 4.89e-41 | 2 |
hair follicle cell | 4.28e-17 | 5 |
epidermal cell | 6.20e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 4.89e-41 | 2 |
hair outer root sheath | 4.89e-41 | 2 |
bulb of hair follicle | 4.89e-41 | 2 |
spinal cord | 2.08e-27 | 3 |
dorsal region element | 2.08e-27 | 3 |
dorsum | 2.08e-27 | 3 |
substantia nigra | 1.88e-21 | 1 |
midbrain nucleus | 1.88e-21 | 1 |
regional part of midbrain | 1.88e-21 | 1 |
midbrain | 1.88e-21 | 1 |
presumptive midbrain | 1.88e-21 | 1 |
midbrain neural tube | 1.88e-21 | 1 |
stroma of bone marrow | 7.72e-21 | 1 |
hair follicle | 4.28e-17 | 5 |
hair follicle placode | 4.28e-17 | 5 |
posterior neural tube | 1.35e-12 | 15 |
chordal neural plate | 1.35e-12 | 15 |
cavitated compound organ | 1.45e-10 | 31 |
medulla oblongata | 5.93e-08 | 3 |
myelencephalon | 5.93e-08 | 3 |
future myelencephalon | 5.93e-08 | 3 |
spleen | 7.26e-08 | 3 |
gastrointestinal system mesentery | 7.26e-08 | 3 |
stomach region | 7.26e-08 | 3 |
mesentery | 7.26e-08 | 3 |
gastrointestinal system serosa | 7.26e-08 | 3 |
mesentery of stomach | 7.26e-08 | 3 |
gut mesentery | 7.26e-08 | 3 |
dorsal mesentery | 7.26e-08 | 3 |
dorsal mesogastrium | 7.26e-08 | 3 |
peritoneal cavity | 7.26e-08 | 3 |
spleen primordium | 7.26e-08 | 3 |
ecto-epithelium | 9.16e-07 | 104 |