FFCP PHASE1:Hg19::chr13:34250861..34250948,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90627 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42814,19164 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y3M8 | |||
|association_with_transcript=0bp_to_ENST00000445227,ENST00000454681,NM_001243476,uc001uux.2_5end | |||
|cluster_id=chr13:34250861..34250948,- | |||
|description=CAGE_peak_1_at_LINC00464_5end,CAGE_peak_4_at_STARD13_5end | |||
|id=chr13:34250861..34250948,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.23e-11;82!UBERON:0003104;3.89e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.50e-39!115;UBERON:0001049!7.14e-20!57;UBERON:0005068!7.14e-20!57;UBERON:0006241!7.14e-20!57;UBERON:0007135!7.14e-20!57;UBERON:0002616!7.58e-17!59;UBERON:0003080!2.31e-16!42;UBERON:0002780!4.13e-16!41;UBERON:0001890!4.13e-16!41;UBERON:0006240!4.13e-16!41;UBERON:0000955!7.73e-16!69;UBERON:0006238!7.73e-16!69;UBERON:0003075!5.69e-15!86;UBERON:0007284!5.69e-15!86;UBERON:0000153!1.55e-14!129;UBERON:0007811!1.55e-14!129;UBERON:0002346!2.75e-14!90;UBERON:0001017!7.32e-14!82;UBERON:0000033!1.66e-13!123;UBERON:0005743!1.87e-13!86;UBERON:0000073!1.86e-12!94;UBERON:0001016!1.86e-12!94;UBERON:0001893!8.18e-12!34;UBERON:0002020!8.60e-12!34;UBERON:0003528!8.60e-12!34;UBERON:0002791!2.10e-11!33;UBERON:0003056!2.21e-11!61;UBERON:0001869!1.26e-10!32;UBERON:0004121!1.83e-10!169;UBERON:0000924!3.31e-10!173;UBERON:0006601!3.31e-10!173;UBERON:0004111!4.01e-09!241;UBERON:0000062!5.60e-09!511;UBERON:0000475!8.01e-09!365;UBERON:0002619!4.23e-08!22;UBERON:0000956!8.32e-08!25;UBERON:0000203!8.32e-08!25;UBERON:0000477!3.12e-07!286;UBERON:0001950!3.27e-07!20;UBERON:0000481!5.48e-07!347;UBERON:0000119!6.88e-07!312;UBERON:0000483!7.93e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.54e-15;41!UBERON:0001890;7.54e-15;41!UBERON:0007023;1.17e-14;114!UBERON:0000073;1.03e-13;53!UBERON:0002616;1.03e-13;53!UBERON:0001893;7.78e-12;34!UBERON:0003528;1.66e-11;34!UBERON:0002020;1.66e-11;34!UBERON:0002791;3.16e-11;32!UBERON:0001869;4.36e-11;32!UBERON:0002619;5.30e-10;22!UBERON:0001017;7.00e-10;75!UBERON:0000955;1.59e-09;68!UBERON:0001950;8.89e-09;20!UBERON:0001894;1.61e-08;7!UBERON:0000956;3.34e-08;25!UBERON:0000203;3.34e-08;25!UBERON:0000125;9.96e-08;9!UBERON:0002308;9.96e-08;9!UBERON:0000160;1.92e-07;17!UBERON:0001016;2.25e-07;83!UBERON:0002368;6.99e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.87e-56,114;UBERON:0001049,1.21e-26,56;UBERON:0005068,1.21e-26,56;UBERON:0006241,1.21e-26,56;UBERON:0007135,1.21e-26,56;UBERON:0000073,3.21e-24,53;UBERON:0002616,3.21e-24,53;UBERON:0011216,1.10e-22,223;UBERON:0000955,1.69e-21,68;UBERON:0006238,1.69e-21,68;UBERON:0002780,3.36e-20,41;UBERON:0001890,3.36e-20,41;UBERON:0003080,3.36e-20,41;UBERON:0006240,3.36e-20,41;UBERON:0003075,4.02e-20,82;UBERON:0007284,4.02e-20,82;UBERON:0010371,4.59e-19,104;UBERON:0001017,1.18e-18,81;UBERON:0002346,2.35e-18,86;UBERON:0001016,8.20e-17,89;UBERON:0010314,8.27e-16,132;UBERON:0001893,4.60e-14,34;UBERON:0003528,4.92e-14,34;UBERON:0002020,4.92e-14,34;UBERON:0003056,1.83e-13,61;UBERON:0004121,7.32e-13,171;UBERON:0000924,7.32e-13,171;UBERON:0006601,7.32e-13,171;UBERON:0002791,1.18e-12,32;UBERON:0004111,1.98e-12,240;UBERON:0001869,2.15e-12,32;UBERON:0002619,3.00e-10,22;UBERON:0000025,1.18e-09,192;UBERON:0001950,5.82e-09,20;UBERON:0000483,6.59e-09,306;UBERON:0000119,1.44e-08,309;UBERON:0001894,1.66e-08,7;UBERON:0006222,1.66e-08,7;UBERON:0000956,2.06e-08,25;UBERON:0000203,2.06e-08,25;UBERON:0004921,3.50e-08,118;UBERON:0000125,8.66e-08,9;UBERON:0002308,8.66e-08,9;UBERON:0002050,8.83e-08,564;UBERON:0003076,1.28e-07,15;UBERON:0003057,1.28e-07,15;UBERON:0000160,1.92e-07,17;UBERON:0002530,1.93e-07,59;UBERON:0000923,2.29e-07,560;UBERON:0010316,2.29e-07,560;UBERON:0005291,2.29e-07,560;UBERON:0006598,2.29e-07,560;UBERON:0010317,2.29e-07,560;UBERON:0002532,2.29e-07,560;UBERON:0005423,4.98e-07,581;UBERON:0001007,5.79e-07,145;UBERON:0001555,5.79e-07,145;UBERON:0007026,5.79e-07,145;UBERON:0000922,7.72e-07,592;UBERON:0002368,8.94e-07,35 | |||
|phase1_expression=0,0.856402095563933,0.704772020479856,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.502170558379211,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0.542270404062111,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0,0,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0.263384084775077,0.393419540227666,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0.390178042679635,0,0.552700035571697,0,0,0.267540828089713,0,0.339928028092699,0,0.68725489096526,0.759059076058509,0.318565414324097,0,0,0,0,0,0,0,0,0,0.289648807765598,0,2.01210257911091,0.383587685530591,0,0,0,0.795285947051099,0.486634870302636,2.55244006342983,0.665188192387692,0.702678285545008,4.45328856692223,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0.258416759169329,3.20189636418039,0.66944122552934,0,0,0.24406205754817,0,0.81014194788176,0.892997282840798,0,0.337834441449967,0,0,0,0,0,0.436094052142534,0.496971951695318,0,0.529636723252875,1.14734648299525,0.354668382198357,0,0,0,4.97937656639626,0.942974704487816,1.79808093424805,1.05950199351452,0,0,0,0,0,0.469737994575059,0,0,1.22492502752936,0,0.413303124703062,0,0.247266929278557,0,0,0,0,1.38532057742091,0,0,0,0.340296549480063,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0.675105328965065,0.0974370051611986,1.26216887122057,0.368199594569197,0,0.355009592516614,0.10075209822764,0,0.386521706326594,1.63647672354501,0.573609190778008,0,0,0.232387885739037,0.518305275076852,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.8231480226628,0,22.8159062679296,21.6221987669078,14.7697476670351,0,4.18160691046586,0.171567810298526,0.439001141634502,0,0.100528972411631,0.740707561268237,0,0,0,0.231860809950154,0.234817388471643,2.02113026865503,0.462985512576611,0.951270761172991,12.6432703673484,6.00940313466411,0.246217006087397,0.234004265139238,0,0.93733833986777,2.35174979478403,0.283550194484773,0,0,0,18.2285398021499,1.58487181223807,1.03664057770386,1.15295962733569,1.76739406796932,0.063497894292169,0.763976851116555,4.68869788840188,1.71072446022705,1.7480673759565,0.300343057843917,4.57322292208925,0.112131084345361,0.43596006883328,0.1466765716419,0,0,0,0.26593811658487,0,0.257207374262142,0,0,1.14382394926518,0,0,0.325736184293735,1.42156779497018,0,0.904318131178758,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0.895304816199478,0.448340575974109,0,0.215627574859517,0.385029108839245,0.76228387266739,0,0,0,0,2.99602809578873,0,0,0.12269149171914,0,0,0.415941723061614,0,0.630809660135739,0,0,0,0,0,0,0.434418072340414,0,0,0,0,0.213455115606889,0,0,0,0.248107807818777,0.460385919864187,0,0.128139149255701,0.511707249066704,0.321707842287215,0,0.154209693802656,0.177561725313127,0.246381468041427,0.519254429183621,0.232420756919918,3.86750238693191,0.40101294060657,0,0.34444334449382,0.546273504020151,1.18011973463482,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,20.6082023295445,1.73981983154852,3.4653989966647,1.14853107599234,0,0,0.096670718292122,0,0.307007349452259,0.137836572484531,1.93356440762893,0.145016693914229,0.255679882248303,0.356128142586949,0.165284915360978,0.576570202095319,10.2090169995667,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0.38126038784765,0,0,0,0,3.41757669408298,1.37268514868027,0.824686816419805,0,0,0,0,0.731140468893853,0,1.22849920267187,0.424216295861138,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0,0,0,0,1.06428319221179,0.211107635297664,0,0,0,0.0962221127255121,0,0,20.5233485693379,0.43050537267123,3.36942951335251,0.443430153536676,1.60806380144872,0,0,0,0,0,0,0,0,0,0,10.0466488552223,0.185803175125719,0.432807638929335,0.0711418433484141,0.159426272728822,0,0,0.635020748171649,0,2.80797178113459,0,0.156679895773023,0,0,0.321176150207399,0.403599414382095,0.425846237690326,0.343505344755765,1.53620382154229,1.3420566473545,0.834245708559542,0,0,0,0.270455678475983,0,0,0.935702702041099,3.36968812325356,0,0.891547074219827,0,0,0,0,0.994147647766298,3.23539657744179,5.45412654612239,0,0,4.38345574152353,3.59169090190492,2.51932747854276,24.6467524830193,0.861593638227486,0,0,0,0,3.64980600856654,0,0,5.81599647657131,3.4324196319885,0,6.77112178821606,1.31189999994294,1.44999915086959,0.1137934482855,0.762760950878299,0,4.48166385213904,2.33283690706603,0.173624994933292,2.65722415744152,2.29133233388275,1.52581736317083,3.09621927807429,2.36438095162838,0.438770794307945,0,0.278847488557207,5.69431912928098,0,0,0,0,0,1.37396390102793,0.533034776018635,0,0.627921025580099,0.997270091400938,0,0,0,0,0.4768097369411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| |||
|short_description=p1@LINC00464,p4@STARD13 | |||
}} |
Latest revision as of 04:45, 17 September 2015
Short description: | p1@LINC00464, p4@STARD13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LINC00464_5end, CAGE_peak_4_at_STARD13_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000445227, ENST00000454681, NM_001243476, uc001uux.2_5end |
EntrezGene: | STARD13 |
HGNC: | 19164&submit=Submit 42814, 19164 |
UniProt: | Q9Y3M8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data