FFCP PHASE1:Hg19::chr13:30355953..30355964,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:30355953..30355964,- | |||
|description=CAGE_peak_at_chr13:30355953..30355964,- | |||
|id=chr13:30355953..30355964,- | |||
|ontology_enrichment_celltype=CL:0002087!3.03e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000771;2.82e-12;2!CL:0000094;1.13e-11;8!CL:0002393;7.88e-09;6!CL:0002397;7.88e-09;6!CL:0000775;9.48e-09;3!CL:0000081;1.66e-08;11!CL:0000623;4.07e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,2.27e-12,2;CL:0000094,9.52e-12,8;CL:0000738,2.60e-10,136;CL:0000775,8.67e-09,3;CL:0000081,1.47e-08,11;CL:0000623,4.08e-08,3;CL:0000825,4.08e-08,3;CL:0000037,1.32e-07,168;CL:0002087,2.25e-07,115;CL:0000766,4.00e-07,72;CL:0002032,4.02e-07,161;CL:0000837,4.02e-07,161;CL:0000988,5.04e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.93e-07;1!UBERON:0008425;3.93e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.00e-12!115;UBERON:0003080!7.46e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,4.97e-07,1;UBERON:0003703,4.97e-07,1;UBERON:0001174,4.97e-07,1;UBERON:0004914,4.97e-07,1;UBERON:0002038,5.89e-07,1;UBERON:0009661,5.89e-07,1;UBERON:0002950,5.89e-07,1;UBERON:0001891,5.89e-07,1;UBERON:0009616,5.89e-07,1;UBERON:0010286,5.89e-07,1;UBERON:0002426,6.99e-07,1;UBERON:0003831,6.99e-07,1;UBERON:0003898,6.99e-07,1;UBERON:0004830,6.99e-07,1;UBERON:0003830,6.99e-07,1;UBERON:0005175,6.99e-07,1;UBERON:0001774,6.99e-07,1;UBERON:0001103,6.99e-07,1;UBERON:0010084,6.99e-07,1 | |||
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| |||
|short_description=p@chr13:30355953..30355964,- | |||
}} |
Latest revision as of 15:29, 24 July 2015
Short description: | p@chr13:30355953..30355964, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:30355953..30355964, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 2.27e-12 | 2 |
granulocyte | 9.52e-12 | 8 |
leukocyte | 2.60e-10 | 136 |
neutrophil | 8.67e-09 | 3 |
blood cell | 1.47e-08 | 11 |
natural killer cell | 4.08e-08 | 3 |
pro-NK cell | 4.08e-08 | 3 |
hematopoietic stem cell | 1.32e-07 | 168 |
nongranular leukocyte | 2.25e-07 | 115 |
myeloid leukocyte | 4.00e-07 | 72 |
hematopoietic oligopotent progenitor cell | 4.02e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.02e-07 | 161 |
hematopoietic cell | 5.04e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 4.97e-07 | 1 |
extrahepatic bile duct | 4.97e-07 | 1 |
common bile duct | 4.97e-07 | 1 |
duodenal papilla | 4.97e-07 | 1 |
substantia nigra | 5.89e-07 | 1 |
midbrain nucleus | 5.89e-07 | 1 |
regional part of midbrain | 5.89e-07 | 1 |
midbrain | 5.89e-07 | 1 |
presumptive midbrain | 5.89e-07 | 1 |
midbrain neural tube | 5.89e-07 | 1 |
chest muscle | 6.99e-07 | 1 |
respiratory system muscle | 6.99e-07 | 1 |
skeletal muscle of trunk | 6.99e-07 | 1 |
respiratory system skeletal muscle | 6.99e-07 | 1 |
thoracic segment muscle | 6.99e-07 | 1 |
chest organ | 6.99e-07 | 1 |
muscle of trunk | 6.99e-07 | 1 |
diaphragm | 6.99e-07 | 1 |
future diaphragm | 6.99e-07 | 1 |