FFCP PHASE1:Hg19::chr13:28712444..28712458,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=255967 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29991 | |||
|TSSclassifier=strong | |||
|UniProt=Q58A45 | |||
|association_with_transcript=-184bp_to_ENST00000380958,ENST00000503791,NM_175854,uc010tdo.1_5end | |||
|cluster_id=chr13:28712444..28712458,+ | |||
|description=CAGE_peak_5_at_PAN3_5end | |||
|id=chr13:28712444..28712458,+ | |||
|ontology_enrichment_celltype=CL:0000037!8.61e-24!172;CL:0000566!8.61e-24!172;CL:0002032!3.94e-23!165;CL:0000837!3.94e-23!165;CL:0000738!1.04e-21!140;CL:0000988!2.15e-20!182;CL:0002031!3.57e-19!124;CL:0002087!1.79e-17!119;CL:0000542!1.46e-12!53;CL:0000051!1.46e-12!53;CL:0000838!3.87e-12!52;CL:0000763!2.99e-11!112;CL:0000049!2.99e-11!112;CL:0000945!5.36e-11!24;CL:0000826!5.36e-11!24;CL:0000236!5.41e-09!14;CL:0000839!1.22e-07!70;CL:0000766!1.52e-07!76;CL:0000557!4.32e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000236;6.93e-25;13!CL:0000945;9.31e-19;24!CL:0000542;4.26e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.99e-23,14;CL:0000945,4.59e-19,24;CL:0000826,4.59e-19,24;CL:0000838,5.51e-09,52;CL:0000542,9.09e-09,53;CL:0000051,9.09e-09,53;CL:0000037,5.43e-08,168;CL:0000988,2.55e-07,177;CL:0002032,6.93e-07,161;CL:0000837,6.93e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000051;4.26e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.75e-10!115;UBERON:0002390!1.11e-09!102;UBERON:0003061!1.11e-09!102;UBERON:0002193!1.90e-09!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.36e-12;15!UBERON:0000179;3.36e-12;15!UBERON:0000463;3.36e-12;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.28e-12,15;UBERON:0000179,2.28e-12,15;UBERON:0000463,2.28e-12,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0.229240217243854,0.492603536699674,0.550975469195755,0,0.383829398097213,0.154816123316076,0,0.6024118375565,0,1.78174561334694,1.42169232487422,0,0.553995408531877,0.401088894940283,0.651032612147555,0.447830948479849,0.32389366601898,0,0.581592955118259,0,0.485168122375632,0.464858073811369,0,0.309706370895104,0.28769239232215,0.768482119587302,0.236482229888585,0,0,0,0.188242339542605,0.545812300115692,0.224723484445085,0.306083892370903,0.641858054152187,0,0.659702600373432,0.199463657621632,0,0,0,1.24564449799115,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0.211255286311942,1.06302149982522,0,0.44931452458598,0.600707571366025,0,0.570025487482497,0.79566670879636,0.547992461293902,0,6.55366333514558,1.77901850772711,2.13365111283254,2.00197993518006,3.4485146397269,1.98313461835459,0.954053754535364,7.39976859842283,5.28513470433845,6.11637165000366,1.32171328579026,2.24203425192614,0.263384084775077,0.393419540227666,0,0.411202997999018,0.501559486172034,0.977766799900771,0,0,0.668462741311041,0.294605907474837,0.221533894583621,1.08321545506006,1.28091319725675,0.780356085359269,0.822189523018381,0.552700035571697,0.579606171470105,0.889719378972363,0.535081656179426,0,0.566546713487831,0.383220493601921,0.34362744548263,0.253019692019503,0.318565414324097,0,0.950452044448374,0.602300476311091,0.511946444617674,0,0,0,0.80642697289893,0.802320587350522,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.196468613246569,0,0,0,0.174129737299267,0,0.476981248610684,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0.267899184852239,0,0.337834441449967,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.490385709340376,0.151357427644931,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0.103052529238439,0.257640540045629,0.37223371266318,0,0.0974370051611986,0.252433774244115,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0,0,0,0,0.196221465125346,0,0,0,0,0,1.26755034821831,0,0.590789906681404,1.32438929824395,0,0,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0.790204397959275,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0.383382679165211,0.492663237895943,0.44024217006613,0.414656231081544,0.576479813667846,0.37872730027914,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0.431255149719035,0.513372145118994,0,0,0,0,0,0.749007023947182,2.99161459204025,2.07207756718018,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.347534457872331,0,0,0.413536052245775,0.647142602455851,1.06727557803444,0.303127571446259,0,0.30239029332968,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0.40101294060657,0.0920809889358963,0,0.364182336013434,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.877039506583738,0.784306353074702,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0,0,0,0.275673144969061,0.107420244868274,0,0.170453254832202,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353437207037059,0,0,0,0,0.487426979262569,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,0,3.98753031021914,0.714695326373367,1.64544909234478,1.94541993357815,0.540031437238115,1.58625035258854,0.106824071127473,0,0.245040215981032,0.557409525377156,0.432807638929335,1.20941133692304,0.159426272728822,0.399158742865633,0.5745161103971,1.05836791361941,0,0.280797178113459,0.912938716132769,0,0,0.677167111206413,1.76646882614069,1.81619736471943,1.70338495076131,0.343505344755765,0.614481528616916,0.671028323677248,1.00109485027145,0,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0.18714054040822,0,0.121360521749513,0.334330152832435,0,0.47748896947538,0,0,0,0.281338832821026,0,0.329607748453519,0.211125408127993,0,2.76283915531148,0,0,0.246169610922139,0.622079175323615,0.179736702294654,0,2.04628948090749,0.197286811273867,4.7896618469388,0,0.969332746095218,0.185536196323703,0,0,0.262379999988587,0.724999575434793,0.455173793141999,0,0,0,0,0.173624994933292,0,0.241192877250816,1.52581736317083,2.54332297841817,0.295547618953547,0,0.10893846351899,0,0.307801034015188,0,0,0.0897576444097721,0.108647371922008,0,0.183195186803725,0,0,0.470940769185074,0,0,0,0.335643173951685,0,0,0,0,0.141353071433941,0,0,0.265372693510018,0,0,0.123563938946503,0,0.067401132980677,0.802577647298789,0.468528891450678,0.91227394607833,0,0,0,0,1.22429104652196,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,1.04836000945218,0,0.19351266257817,0.0730893170861856,0.246346371159628,0.872901148395775,0,0,0.137041924646751,0.397429223405979,0.189932387867636,0,0.0801588202515337,0.426905989478705,0,0.144090417154106,0,0.686379991447858,0,0,0.235694034616795,0,0,0,0.288950589901519,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0.717873024576814,0.199679000498991,0,0,0.403100834920358,0.360299883542404,0,0.157566364614447,0,0.13480708770837,0.0984274815147488,0.0846733320657845,0,0.136203406111576,0,0.137539436597234,0,0.2249738915515,0.77380195455795,0.303747783290123,1.0063040627978,0,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,1.32506888912221,0.129282956361551,0.13223260174269,0,0,0.747511887973863,1.57204305099666,1.65695622138878,0.992332043623902,0.197611631897944,0.365377795142688,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0,0,0.554645257684261,0,0.138348634936231,0,0.151649117541648,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0.358177682162975,0,0.219284049578707,0.353378291891762,0.192914038270915,0.168942440653073,0,0.345430341731199,0,0.414775308455192,0.584580926518165,0.930053882193542,0.490696182767533,0,0,0,0,0.640150378164845,0,0,0,0,0,0,0.107824811396682,0.314531883711793,0,0.169732529954025,0.850299680406731,0.123935764259002,0.558644917973244,0,6.70324832510653,0,0,0,0.128458450192919,1.41696576325585,0.478901577171454,0,1.26035848110859,0.276629009856872,0.161475645631851,0,0.0981477185010256,0,0.183428598521679,0.346576998451015,0,0,0.397832444232549,0.225630985047772,0,0,0,0.163771917510097,0.443568258651136,0.270150338473579,0.781078098613847,0,0.0634158101939068,1.64092442705466,0,0.496211178389294,0.175871244359621,0.127762427639595,0,0,0,0,0.177404740325278,0.230467975111559,0,0.339848664884159,0.0657727735628491,0.118193840883968,0,0.39246546425257,0.471346769748006,0.280272163313789,0,0,0,0.500335809236594,0,0.116241425368125,0,0,0.414432328326074,0.17071847709395,0,0.430227358820278,0.236664001461131,0,0,0.4582137370881,0,0,0.111855431797792,0.196300467230486,0.487671699929078,0.647428837187895,0.102662806856247,0,0.971421986118279,0.233939463462106,0,0,0.22589216407792,0,0.150962843566674,0.154348316215889,0,0.940634592723046,0.245148321753905,0.235676547101626,0.392616934229891,0,0,0.169927114687817,0.563903507879121,0.386747327841463,0.699588091474503,0,0,0,0,0,0,0.315543124386369,0,0.872701380680755,0.5290268405154,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0.459474497674225,0,0.0757786982182394,0,0,0.20686599172379,0.639701945702943,0.476128862927481,0.904244737704086,0.496597714366863,0.112131862580613,0.12729431655633,0.202117188958219,1.08858373948481,0,1.0776328482334,0.286888821570705,0,0.407016343054873,0.106727345877715,0,0.269475606319761,0,0.733448665097199,0,0,1.61019034872821,0.641136984606466 | |||
|short_description=p5@PAN3 | |||
}} |
Latest revision as of 23:54, 16 September 2015
Short description: | p5@PAN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PAN3_5end |
Coexpression cluster: | NA |
Association with transcript: | -184bp_to_ENST00000380958, ENST00000503791, NM_175854, uc010tdo.1_5end |
EntrezGene: | PAN3 |
HGNC: | 29991 |
UniProt: | Q58A45 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.99e-23 | 14 |
lymphocyte of B lineage | 4.59e-19 | 24 |
pro-B cell | 4.59e-19 | 24 |
lymphoid lineage restricted progenitor cell | 5.51e-09 | 52 |
lymphocyte | 9.09e-09 | 53 |
common lymphoid progenitor | 9.09e-09 | 53 |
hematopoietic stem cell | 5.43e-08 | 168 |
hematopoietic cell | 2.55e-07 | 177 |
hematopoietic oligopotent progenitor cell | 6.93e-07 | 161 |
hematopoietic multipotent progenitor cell | 6.93e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 2.28e-12 | 15 |
haemolymphatic fluid | 2.28e-12 | 15 |
organism substance | 2.28e-12 | 15 |