FFCP PHASE1:Hg19::chr13:24144601..24144622,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55504 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11915 | |||
|TSSclassifier=strong | |||
|UniProt=B4E2I6,Q9NS68 | |||
|association_with_transcript=92bp_to_ENST00000248484,NM_001204459,NM_148957_5end | |||
|cluster_id=chr13:24144601..24144622,+ | |||
|description=CAGE_peak_7_at_TNFRSF19_5end | |||
|id=chr13:24144601..24144622,+ | |||
|ontology_enrichment_celltype=CL:0002620!4.81e-10!23;CL:0000148!9.62e-09!10;CL:0000541!9.62e-09!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.08e-14;10!CL:0000147;3.09e-10;14!CL:0002567;1.23e-08;3!CL:0000710;4.27e-07;20!CL:0002566;4.33e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.89e-14,10;CL:0000541,1.89e-14,10;CL:0000147,2.89e-10,14;CL:0002567,8.03e-09,3;CL:0000710,4.07e-07,20;CL:0002566,4.60e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.49e-07;1!UBERON:0004140;1.49e-07;1!UBERON:0008801;2.03e-07;1!UBERON:0010227;4.33e-07;1!UBERON:0010226;4.33e-07;1!UBERON:0005062;6.69e-07;4!UBERON:0007284;6.69e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.14e-13;2!DOID:178;1.20e-07;1!DOID:326;1.20e-07;1!DOID:3978;1.20e-07;1!DOID:3394;1.20e-07;1!DOID:5844;1.20e-07;1!DOID:1287;3.02e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.08e-13,2;DOID:178,1.12e-07,1;DOID:326,1.12e-07,1;DOID:3978,1.12e-07,1;DOID:3394,1.12e-07,1;DOID:5844,1.12e-07,1;DOID:1287,2.93e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.78e-13!115;UBERON:0002097!7.45e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;2.70e-13;2!UBERON:0007100;5.59e-11;25!UBERON:0001044;7.36e-10;6!UBERON:0003293;7.36e-10;6!UBERON:0003294;7.36e-10;6!UBERON:0010047;7.36e-10;6!UBERON:0003408;7.36e-10;6!UBERON:0000167;7.36e-10;6!UBERON:0003978;6.20e-09;3!UBERON:0000946;6.20e-09;3!UBERON:0004151;1.23e-08;3!UBERON:0007029;1.20e-07;1!UBERON:0001736;1.49e-07;1!UBERON:0002135;1.49e-07;1!UBERON:0001831;2.03e-07;1!UBERON:0002426;2.03e-07;1!UBERON:0003831;2.03e-07;1!UBERON:0003898;2.03e-07;1!UBERON:0004830;2.03e-07;1!UBERON:0003830;2.03e-07;1!UBERON:0005175;2.03e-07;1!UBERON:0001774;2.03e-07;1!UBERON:0001103;2.03e-07;1!UBERON:0001567;2.03e-07;1!UBERON:0002084;4.33e-07;1!UBERON:0002079;4.33e-07;1!UBERON:0002146;4.33e-07;1!UBERON:0002082;4.33e-07;1!UBERON:0005623;4.33e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.71e-13,2;UBERON:0007100,3.27e-10,27;UBERON:0001044,7.60e-10,6;UBERON:0003293,7.60e-10,6;UBERON:0003294,7.60e-10,6;UBERON:0010047,7.60e-10,6;UBERON:0000167,7.60e-10,6;UBERON:0003978,4.60e-09,3;UBERON:0009751,4.60e-09,3;UBERON:0000946,4.60e-09,3;UBERON:0002523,4.60e-09,3;UBERON:0005983,4.60e-09,3;UBERON:0002165,4.60e-09,3;UBERON:0002062,4.60e-09,3;UBERON:0007280,4.60e-09,3;UBERON:0004151,8.36e-09,3;UBERON:0007029,1.20e-07,1;UBERON:0002135,1.36e-07,1;UBERON:0001736,1.44e-07,1;UBERON:0006298,1.44e-07,1;UBERON:0002426,1.85e-07,1;UBERON:0003831,1.85e-07,1;UBERON:0003898,1.85e-07,1;UBERON:0004830,1.85e-07,1;UBERON:0003830,1.85e-07,1;UBERON:0005175,1.85e-07,1;UBERON:0001774,1.85e-07,1;UBERON:0001103,1.85e-07,1;UBERON:0010084,1.85e-07,1;UBERON:0001831,2.09e-07,1;UBERON:0001567,2.09e-07,1;UBERON:0008801,2.09e-07,1;UBERON:0002084,2.52e-07,1;UBERON:0002082,2.52e-07,1;UBERON:0010226,2.52e-07,1;UBERON:0002146,3.02e-07,1;UBERON:0005623,3.02e-07,1;UBERON:0002079,4.08e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0.85870796139317,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0.85422955527427,0,1.50045548042201,0.721367704669072,0.257640540045629,0.558350568994769,0.843881661206331,0.0974370051611986,0.757301322732344,1.10459878370759,0.323292113637624,1.42003837006646,1.30977727695932,0.169560592310488,0,0,0,0,0,0.116193942869518,0.725627385107593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,1.33345578013555,1.52795370223311,0,1.71072446022705,0.616964956219941,2.10240140490742,1.14330573052231,0.112131084345361,0,0,0.129271715757778,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30323011489202,0,0,0.167516265334349,0.637938751653163,0,0,0,0.36807447515742,0,0.271265023699736,0,0,0,0,0.601892199455438,2.27407504055985,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0.574890092096664,0,0,0.120859449591622,0,0,0,0.546273504020151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.48335359146061,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0,0,0,0.597743964753209,0,0,1.73856760253663,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0.108647371922008,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.404406797884062,2.40773294189637,0,0,0,0,0.394584402849391,0,1.53036380815245,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0,0.577901179803038,0,0,0,0,0,3.90995361781156,1.60412296808179,0,4.5926170114768,6.00916467391199,0.89268582976749,3.35917362433631,0,0,0.393915911536118,0,0.26961417541674,0,0,0,0.408610218334727,0,0,0,0,0.77380195455795,0.121499113316049,0,0,0,0,0.896436696664224,0,1.42939065274673,1.98627591109629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.943225830597996,0.414239055347196,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0.454947352624943,7.42209867216915,0,0,0,0.149254802886874,0,0,0.189403005275089,0.754703705257725,0,0,0,0,0.147855149989634,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0.537052785212442,0,0,0,0,0.673498977531838,0,0,0,0.782982875895635,0,0,0,0.358177682162975,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.982886743728125,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,1.51243017733031,0,0.161475645631851,0,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0.163771917510097,0,0,0,0,0.0634158101939068,2.7348740450911,2.19303106742873,0,0,0,0.535701835878287,1.00885116665647,0.606965604236632,0.682986574053893,0.177404740325278,0,0,0.135939465953663,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.857718530119876,0,0,0,0,0,0,0,4.30227358820278,0,0,0.423387050190929,0,0,0,0,0.196300467230486,0,0,0,0,4.37139893753226,0,0.596852325484105,0.118920090777569,1.1294608203896,0.329821550236287,0.150962843566674,0,0.218559560503957,0,0.245148321753905,0,0,0.297046400327086,1.2679671827502,0,0,0.0644578879735772,0,0,0,0,0,3.66983426723633,0,0.473314686579554,0.0679914901909147,0.436350690340377,0,1.11598505450025,0,0,0,0,1.26698501011437,0,0,0,0,0.0757786982182394,0,0,0,0.852935927603924,0,0,0,0,0.0636471582781649,0,0.653150243690884,2.05339980651169,0.0673520530145875,0.717222053926764,0.99798106963804,0,0,0,0,0,0.366724332548599,0,0,0.201273793591026,0 | |||
|short_description=p7@TNFRSF19 | |||
}} |
Latest revision as of 20:54, 16 September 2015
Short description: | p7@TNFRSF19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TNFRSF19_5end |
Coexpression cluster: | NA |
Association with transcript: | 92bp_to_ENST00000248484, NM_001204459, NM_148957_5end |
EntrezGene: | TNFRSF19 |
HGNC: | 11915 |
UniProt: | B4E2I6Q9NS68 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.89e-14 | 10 |
melanoblast | 1.89e-14 | 10 |
pigment cell | 2.89e-10 | 14 |
light melanocyte | 8.03e-09 | 3 |
neurecto-epithelial cell | 4.07e-07 | 20 |
dark melanocyte | 4.60e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.08e-13 | 2 |
vascular disease | 1.12e-07 | 1 |
ischemia | 1.12e-07 | 1 |
extrinsic cardiomyopathy | 1.12e-07 | 1 |
myocardial ischemia | 1.12e-07 | 1 |
myocardial infarction | 1.12e-07 | 1 |
cardiovascular system disease | 2.93e-07 | 4 |