FFCP PHASE1:Hg19::chr8:143781490..143781507,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:143781490..143781507,+
|short_description=p4@LY6K
|description=CAGE_peak_4_at_LY6K_5end
|association_with_transcript=-21bp_to_ENST00000292430,ENST000005611...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54742 | |EntrezGene=54742 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24225 | |HGNC=24225 | ||
|TSSclassifier=strong | |||
|UniProt=Q17RY6 | |UniProt=Q17RY6 | ||
|association_with_transcript=-21bp_to_ENST00000292430,ENST00000561179,NM_001160354,NM_001160355,NM_017527,uc011ljv.1,uc011ljw.1,uc011ljx.1_5end | |||
|cluster_id=chr8:143781490..143781507,+ | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_4_at_LY6K_5end | |||
|id=chr8:143781490..143781507,+ | |||
|ontology_enrichment_celltype=CL:0000548!5.08e-16!679;CL:0000004!5.08e-16!679;CL:0000255!5.08e-16!679;CL:0000012!8.58e-16!682;CL:0000860!2.10e-13!45;CL:0002057!1.86e-11!42;CL:0002371!4.17e-11!591;CL:0000003!9.00e-10!722;CL:0000144!2.65e-09!625;CL:0000063!6.43e-08!578;CL:0000055!3.78e-07!180;CL:0000057!8.25e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.44e-20;33!CL:0002057;2.44e-20;33!CL:0000473;5.68e-13;39!CL:0000234;5.68e-13;39!CL:0000576;1.50e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.87e-17,42;CL:0002057,9.87e-17,42;CL:0000473,2.45e-13,48;CL:0000234,2.45e-13,48;CL:0002194,9.26e-09,59;CL:0000576,9.26e-09,59;CL:0000040,9.26e-09,59;CL:0000559,9.26e-09,59;CL:0002009,3.43e-08,61;CL:0000839,6.03e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;5.79e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;9.40e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.61e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000926!2.15e-12!448;UBERON:0004120!2.15e-12!448;UBERON:0006603!2.15e-12!448;UBERON:0002204!8.10e-11!167;UBERON:0000467!6.02e-10!625;UBERON:0000468!7.37e-10!659;UBERON:0000480!8.61e-10!626;UBERON:0000486!6.70e-09!82;UBERON:0003102!8.99e-09!95;UBERON:0001737!1.01e-08!9;UBERON:0000914!1.68e-08!83;UBERON:0002329!1.68e-08!83;UBERON:0003077!1.68e-08!83;UBERON:0003059!1.68e-08!83;UBERON:0007282!1.68e-08!83;UBERON:0009618!1.68e-08!83;UBERON:0007285!1.68e-08!83;UBERON:0000923!5.54e-08!604;UBERON:0005291!5.54e-08!604;UBERON:0006598!5.54e-08!604;UBERON:0002532!5.54e-08!604;UBERON:0002050!7.60e-08!605;UBERON:0005423!7.60e-08!605;UBERON:0004765!9.62e-08!101;UBERON:0001434!9.62e-08!101;UBERON:0000922!4.09e-07!612;UBERON:0003104!9.94e-07!238;UBERON:0009142!9.94e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.40e-12;9!UBERON:0001557;2.40e-12;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.54e-12,9;UBERON:0002204,7.73e-11,167;UBERON:0001434,2.46e-10,100;UBERON:0004765,9.01e-10,90;UBERON:0002371,3.80e-07,76;UBERON:0001474,4.48e-07,82 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0,0.783556884599516,0.491467873003018,0,0.655324116390517,0.527533956456907,2.84662611808107,3.31397375727916,0,0,0,0,0.492484232307152,0,0.626909442956176,0,0.547497700291537,0.251085279189606,0,0,0,0,0,0.928896739896456,1.83884244895785,2.409647350226,0,0,0,0.293600439334847,1.10799081706375,0.200544447470142,0.651032612147555,0,0,0,2.32637182047304,7.55751887377619,1.94067248950253,2.78914844286822,4.52284676824008,1.54853185447552,3.16461631554365,7.42866048934392,1.89185783910868,6.55016793399575,5.80936215225443,2.70852973188684,3.20011977222428,8.18718450173537,2.24723484445085,4.89734227793444,6.41858054152187,5.75403413219137,1.31940520074686,4.18873681005427,0.852449501065388,8.70627715885752,7.94339314567596,6.22822248995575,4.77372463987812,6.77927793946262,2.82345498116652,4.84319602106695,8.47038562771399,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.511450247374121,1.0843174571537,0,1.44846518960824,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0.0654895377488563,2.18577172975525,2.22470665670658,0,0,0,0,0.571994910780128,0.371457501329565,0.198762407366705,0.860234595106124,1.04142150482278,1.69592382577203,6.29249154314859,2.20094433552054,1.04497483268405,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0,0.735326160691737,1.62028389576352,0.625098097988558,0.44905874525234,1.46394924628319,0,1.89853131913626,0.916008719652036,0,0,0.436094052142534,0.496971951695318,0.506522046658319,0.132409180813219,0,0.709336764396714,0.560677600142307,0,0,0,0.942974704487816,0,0,0,0.234321431833797,3.1216007683032,2.2818872861778,2.09228152772521,0.822041490506354,2.10434827678571,1.26405726032024,2.04154171254893,2.7023549808589,0.826606249406124,2.37600571456411,1.23633464639278,0.910161361938026,0.718618141816238,1.0100166837244,0.750711119231785,0.554128230968366,1.31693286264251,2.45190236639216,1.20190447125277,1.24775401476023,2.69084453533293,1.06778694409284,0.423863802319124,3.00091096084402,0.412210116953756,0.515281080091258,1.11670113798954,0.506328996723799,0.0974370051611986,1.00973509697646,0.0920498986422993,0.323292113637624,0.355009592516614,0.201504196455281,1.01736355386293,2.70565194428616,1.90922284413584,0.573609190778008,0,0,0,0.207322110030741,0,0,3.12899064659632,0.643240938192885,1.38134921352481,0.464367928031979,6.49691533502627,26.6190300089649,23.9390259910904,26.0291912274161,31.3234882559999,31.3746399493065,30.3706392462204,33.9774896563614,32.9652061410581,33.8577498112824,0,1.40241773803446,0.8231480226628,1.47008711385542,0,0,0,0,0,0.343135620597051,1.64625428112938,0,6.53438320675601,1.01847289674383,1.95484983186195,2.07986957055916,0,0.231860809950154,0,0.144366447761074,0,0.761016608938393,0,0,0,0,0,1.87467667973554,0,1.55952606966625,2.4180801129769,5.81267877027924,8.81780162079986,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0.897048674762886,0,1.39342743059805,0,0,1.690605505112,0,0,2.05765899409714,2.83698264046557,1.8649552531127,0.714889968290738,2.71310802695722,7.40916303102692,2.60588947434988,0.355391948742546,3.16780749173372,0,0,0.099972991182057,0,0,0,0,0,0,0.579125226670317,1.43833425785268,0.537182889719687,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,1.2269149171914,4.50153468953709,2.44138521329762,0.415941723061614,1.07057393278297,0.630809660135739,0.468565659970853,0.300946099727719,0,1.03473071292505,0.664225598535437,0.921845842708516,1.30325421702124,0.783204629850962,0,0,0.215714200818617,0.106727557803444,9.7000822862803,0,0.907170879989041,0,0,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0.887808626565635,1.31403449622095,0,1.74315567689939,0,0,1.19705285616665,0.114814448164607,0,0.131124414959424,0.451199612907412,0.308061348417659,3.13739907670742,0,0.105551628892876,1.13733384070897,1.02056223165909,0.431831832204279,3.08454505380579,0,1.00337954770971,0.509752546090077,0,0.223874754722178,0,0,1.02580050046556,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0.096670718292122,2.7728751080636,1.84204409671355,0.827019434907183,0.644521469209642,1.74020032697074,1.53407929348982,0,0.495854746082934,0.576570202095319,0.765676274967505,0.2023155617111,0,0.31481234683064,0,0,1.06461206063404,0,0.37064843820784,3.57812216854978,2.60510858551767,0.632758849437452,0.38126038784765,1.79128453917934,0.855877976067841,1.27281299170375,1.56989728039846,0.539617372749944,0.54907405947211,0.589062011728432,3.03273722359974,1.58510321173008,0.842516912477962,1.95053495635836,2.19342140668156,2.11300293513511,0.818999468447914,0.707027159768564,0,1.10273068709225,3.3171948762061,1.31535265576129,0,1.31178950409327,0,0.92947049429925,0,0.286822704408103,0.294747123039363,0,2.48332744849418,0.422215270595328,1.31717957183961,0,1.04980416073495,1.63577591633371,0,1.08890984861323,0.0941438007767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| ||
|short_description=p4@LY6K | |||
}} | }} |
Latest revision as of 21:14, 16 September 2015
Short description: | p4@LY6K |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LY6K_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | -21bp_to_ENST00000292430, ENST00000561179, NM_001160354, NM_001160355, NM_017527, uc011ljv.1, uc011ljw.1, uc011ljx.1_5end |
EntrezGene: | LY6K |
HGNC: | 24225 |
UniProt: | Q17RY6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.87e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.87e-17 | 42 |
defensive cell | 2.45e-13 | 48 |
phagocyte | 2.45e-13 | 48 |
monopoietic cell | 9.26e-09 | 59 |
monocyte | 9.26e-09 | 59 |
monoblast | 9.26e-09 | 59 |
promonocyte | 9.26e-09 | 59 |
macrophage dendritic cell progenitor | 3.43e-08 | 61 |
myeloid lineage restricted progenitor cell | 6.03e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.54e-12 | 9 |
musculoskeletal system | 7.73e-11 | 167 |
skeletal system | 2.46e-10 | 100 |
skeletal element | 9.01e-10 | 90 |
bone marrow | 3.80e-07 | 76 |
bone element | 4.48e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.61e-08 | 14 |