FFCP PHASE1:Hg19::chr13:109644107..109644133,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:109644107..109644133,+ | |||
|coexpression_cluster_id=C1013 | |||
|description=CAGE_peak_at_chr13:109644107..109644133,+ | |||
|id=chr13:109644107..109644133,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.35e-62!42;CL:0000860!3.20e-57!45;CL:0002194!3.35e-41!63;CL:0000576!3.35e-41!63;CL:0000040!3.35e-41!63;CL:0000559!3.35e-41!63;CL:0002009!9.78e-40!65;CL:0000839!1.95e-36!70;CL:0000557!7.86e-36!71;CL:0000766!9.75e-36!76;CL:0000763!4.91e-22!112;CL:0000049!4.91e-22!112;CL:0002087!1.09e-18!119;CL:0002031!1.15e-17!124;CL:0000738!3.04e-16!140;CL:0002032!9.57e-13!165;CL:0000837!9.57e-13!165;CL:0000037!5.96e-12!172;CL:0000566!5.96e-12!172;CL:0000988!6.33e-11!182;CL:0000134!6.45e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.42e-48;33!CL:0002057;1.42e-48;33!CL:0000473;3.26e-34;39!CL:0000234;3.26e-34;39!CL:0000576;2.67e-24;48!CL:0000766;1.23e-13;69!CL:0000319;1.32e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.99e-40,42;CL:0002057,2.99e-40,42;CL:0000473,5.31e-35,48;CL:0000234,5.31e-35,48;CL:0002194,1.21e-27,59;CL:0000576,1.21e-27,59;CL:0000040,1.21e-27,59;CL:0000559,1.21e-27,59;CL:0002009,1.08e-26,61;CL:0000839,1.45e-24,66;CL:0000557,3.55e-24,67;CL:0000766,2.15e-22,72;CL:0000763,2.26e-14,108;CL:0000049,2.26e-14,108;CL:0002087,2.17e-13,115;CL:0002031,9.35e-13,120;CL:0000319,1.32e-11,1;CL:0000738,4.89e-11,136;CL:0002032,5.00e-09,161;CL:0000837,5.00e-09,161;CL:0000037,1.43e-08,168;CL:0000988,4.90e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.91e-30;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;4.53e-12;1!DOID:3030;1.32e-11;1!DOID:201;3.77e-08;6!DOID:0060100;3.77e-08;6!DOID:4231;8.93e-07;2!DOID:1907;8.93e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,4.53e-12,1;DOID:3030,1.32e-11,1;DOID:201,3.77e-08,6;DOID:0060100,3.77e-08,6;DOID:4231,8.93e-07,2;DOID:1907,8.93e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001474!2.46e-33!86;UBERON:0004765!1.14e-31!101;UBERON:0001434!1.14e-31!101;UBERON:0002371!4.63e-31!80;UBERON:0002390!6.36e-23!102;UBERON:0003061!6.36e-23!102;UBERON:0002193!2.81e-20!112;UBERON:0002405!1.42e-19!115;UBERON:0002204!2.18e-17!167;UBERON:0003081!3.95e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,8.49e-24,90;UBERON:0001474,8.99e-23,82;UBERON:0001434,3.12e-21,100;UBERON:0002371,3.91e-21,76;UBERON:0002405,5.68e-17,93;UBERON:0002390,5.10e-16,98;UBERON:0003061,5.10e-16,98;UBERON:0002193,2.26e-14,108;UBERON:0002204,6.89e-12,167;UBERON:0003081,9.38e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0.377875943688809,0.242584061187816,0.232429036905685,2.05583944010913,3.40677007984614,5.46615545412086,7.17249978281482,12.2970759542064,1.37898272294647,3.87290810150296,0,0.376484679085209,1.63743690034707,0.449446968890169,0.306083892370903,1.60464513538047,1.27867425159808,0,0.797854630486527,0,0.290209238628584,0.56738522469114,0,9.2962006144995,15.1230046341858,19.7641848681656,0.605399502633369,0.736555271975129,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.545492241181669,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43521413381507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0.909243296012797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47463745252232,0,0,0,0,0,54.1271493740412,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,8.28431911272121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:109644107..109644133,+ | |||
}} |
Latest revision as of 14:26, 24 July 2015
Short description: | p@chr13:109644107..109644133, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:109644107..109644133, + |
Coexpression cluster: | C1013_myxofibrosarcoma_CD14_Preadipocyte_large_bone_Fibroblast_osteosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.99e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.99e-40 | 42 |
defensive cell | 5.31e-35 | 48 |
phagocyte | 5.31e-35 | 48 |
monopoietic cell | 1.21e-27 | 59 |
monocyte | 1.21e-27 | 59 |
monoblast | 1.21e-27 | 59 |
promonocyte | 1.21e-27 | 59 |
macrophage dendritic cell progenitor | 1.08e-26 | 61 |
myeloid lineage restricted progenitor cell | 1.45e-24 | 66 |
granulocyte monocyte progenitor cell | 3.55e-24 | 67 |
myeloid leukocyte | 2.15e-22 | 72 |
myeloid cell | 2.26e-14 | 108 |
common myeloid progenitor | 2.26e-14 | 108 |
nongranular leukocyte | 2.17e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 9.35e-13 | 120 |
mucus secreting cell | 1.32e-11 | 1 |
leukocyte | 4.89e-11 | 136 |
hematopoietic oligopotent progenitor cell | 5.00e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.00e-09 | 161 |
hematopoietic stem cell | 1.43e-08 | 168 |
hematopoietic cell | 4.90e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 8.49e-24 | 90 |
bone element | 8.99e-23 | 82 |
skeletal system | 3.12e-21 | 100 |
bone marrow | 3.91e-21 | 76 |
immune system | 5.68e-17 | 93 |
hematopoietic system | 5.10e-16 | 98 |
blood island | 5.10e-16 | 98 |
hemolymphoid system | 2.26e-14 | 108 |
musculoskeletal system | 6.89e-12 | 167 |
lateral plate mesoderm | 9.38e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 4.53e-12 | 1 |
mucinous adenocarcinoma | 1.32e-11 | 1 |
connective tissue cancer | 3.77e-08 | 6 |
musculoskeletal system cancer | 3.77e-08 | 6 |
histiocytoma | 8.93e-07 | 2 |
malignant fibroxanthoma | 8.93e-07 | 2 |