FFCP PHASE1:Hg19::chr12:70861951..70861975,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000551438_5end | |||
|cluster_id=chr12:70861951..70861975,+ | |||
|description=CAGE_peak_1_at_ENST00000551438_5end | |||
|id=chr12:70861951..70861975,+ | |||
|ontology_enrichment_celltype=CL:0000945!2.27e-18!24;CL:0000826!2.27e-18!24;CL:0000236!5.27e-11!14;CL:0000838!3.48e-08!52;CL:0000542!6.07e-08!53;CL:0000051!6.07e-08!53;CL:0000039!7.99e-08!7;CL:0000586!7.99e-08!7;CL:0002032!8.19e-07!165;CL:0000837!8.19e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000039;7.42e-27;7!CL:0000586;7.42e-27;7!CL:0000236;1.28e-14;13!CL:0000785;5.06e-13;1!CL:0000222;5.06e-13;1!CL:0000819;5.06e-13;1!CL:0000945;4.24e-12;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.80e-27,7;CL:0000586,3.80e-27,7;CL:0000236,1.45e-13,14;CL:0000819,5.38e-13,1;CL:0000945,4.95e-12,24;CL:0000826,4.95e-12,24;CL:0000838,9.95e-08,52;CL:0000542,1.42e-07,53;CL:0000051,1.42e-07,53;CL:0000785,3.93e-07,2;CL:0000955,3.93e-07,2;CL:0000818,3.93e-07,2;CL:0000954,3.93e-07,2;CL:0000816,3.93e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.54e-19;10!UBERON:0005564;6.54e-19;10!CL:0000954;3.81e-07;2 | |||
|ontology_enrichment_disease=DOID:2531!2.77e-13!51;DOID:0060083!2.77e-13!51;DOID:0060058!3.53e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.01e-18;22!DOID:2994;1.01e-18;22!DOID:1799;5.06e-13;1!DOID:10165;5.06e-13;1!DOID:0060073;5.06e-13;1!DOID:8675;5.06e-13;1!DOID:1798;5.06e-13;1!DOID:0060058;3.15e-11;10!DOID:3193;3.81e-07;2!DOID:962;3.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,6.95e-19,22;DOID:2994,6.95e-19,22;DOID:1799,3.76e-13,1;DOID:10165,3.76e-13,1;DOID:1798,3.76e-13,1;DOID:0060073,5.38e-13,1;DOID:8675,5.38e-13,1;DOID:0060058,3.88e-11,10;DOID:2531,5.83e-08,51;DOID:0060083,5.83e-08,51;DOID:3193,4.69e-07,2;DOID:962,4.69e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002780!7.64e-11!41;UBERON:0001890!7.64e-11!41;UBERON:0006240!7.64e-11!41;UBERON:0001893!9.85e-11!34;UBERON:0003080!1.77e-10!42;UBERON:0002791!7.12e-10!33;UBERON:0001869!1.16e-08!32;UBERON:0002619!1.33e-08!22;UBERON:0001049!1.51e-08!57;UBERON:0005068!1.51e-08!57;UBERON:0006241!1.51e-08!57;UBERON:0007135!1.51e-08!57;UBERON:0002020!4.20e-08!34;UBERON:0003528!4.20e-08!34;UBERON:0002616!4.31e-08!59;UBERON:0001950!5.76e-08!20;UBERON:0007023!1.32e-07!115;UBERON:0000956!2.61e-07!25;UBERON:0000203!2.61e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.51e-23;8!UBERON:0003135;3.20e-17;11!UBERON:0000991;3.84e-09;21!UBERON:0003101;9.78e-09;22!UBERON:0000079;9.78e-09;22!UBERON:0003714;3.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.40e-24,8;UBERON:0003135,2.10e-17,11;UBERON:0000991,3.10e-09,21;UBERON:0009196,3.10e-09,21;UBERON:0009117,3.10e-09,21;UBERON:0005564,3.10e-09,21;UBERON:0004176,7.97e-09,22;UBERON:0003101,7.97e-09,22;UBERON:0000079,7.97e-09,22;UBERON:0003714,4.69e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.164201178899891,0.472264687882075,0,0,0,0,0,0,0.309868802321207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,1.75996244461323,1.09227722252426,0.889509253863555,0,0.400395987036012,0.574752439954483,1.32208974556972,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0.228234679033192,0.313359791546046,0,0,0,0.201799707191048,2.98092366383228,1.03051603426729,0.614481528616916,0.223676107892416,0.333698283423817,0.781552381608161,0.278406173895242,0,0,0,0,0,0.439524537815682,0,2.34031106982705,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,2.55786185113436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0.113942055847001,0,0.359030577639089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.539209063845416,0,0.468528891450678,1.27718352450966,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0.522355239482415,0,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0,0.225980740780532,0.137041924646751,0.794858446811959,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0.262887354279314,0,0,0,0,0.429226048136571,0,0,0,0,0.157566364614447,0.412079291905832,0.13480708770837,0,0.846733320657845,0,0.408610218334727,0,0,0,0.2249738915515,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09613338542806,0,0,0,0,0,0,0,0,0.250381861413,0,0,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0.655219697692825,0.245772908753719,0,0,0.320075189082423,0.344429959321631,0,0.184105950251841,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0.123935764259002,1.11728983594649,0,0,0,0,0,0,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0.490738592505128,0,0,0,0.762764190934334,0,0.596748666348824,0,0.40341013740704,0,1.57144016688853,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0.514464028312255,0.747667062745149,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0.193373663920732,0.399764623699716,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0,1.85751472338282,0,1.83579893535567,1.87052183685892,1.47031839255752,1.25353769646188,0.151557396436479,0,0,0.413731983447581,0,0,0,0,0,0.12729431655633,0,0,0,0.673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000551438 | |||
}} |
Latest revision as of 12:07, 24 July 2015
Short description: | p1@ENST00000551438 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000551438_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000551438_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.80e-27 | 7 |
germ cell | 3.80e-27 | 7 |
B cell | 1.45e-13 | 14 |
B-1 B cell | 5.38e-13 | 1 |
lymphocyte of B lineage | 4.95e-12 | 24 |
pro-B cell | 4.95e-12 | 24 |
lymphoid lineage restricted progenitor cell | 9.95e-08 | 52 |
lymphocyte | 1.42e-07 | 53 |
common lymphoid progenitor | 1.42e-07 | 53 |
mature B cell | 3.93e-07 | 2 |
pre-B-II cell | 3.93e-07 | 2 |
transitional stage B cell | 3.93e-07 | 2 |
small pre-B-II cell | 3.93e-07 | 2 |
immature B cell | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 8.40e-24 | 8 |
male reproductive organ | 2.10e-17 | 11 |
gonad | 3.10e-09 | 21 |
indifferent external genitalia | 3.10e-09 | 21 |
indifferent gonad | 3.10e-09 | 21 |
gonad primordium | 3.10e-09 | 21 |
external genitalia | 7.97e-09 | 22 |
male organism | 7.97e-09 | 22 |
male reproductive system | 7.97e-09 | 22 |
neural tissue | 4.69e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.95e-19 | 22 |
germ cell cancer | 6.95e-19 | 22 |
islet cell tumor | 3.76e-13 | 1 |
endocrine pancreas cancer | 3.76e-13 | 1 |
pancreatic endocrine carcinoma | 3.76e-13 | 1 |
lymphatic system cancer | 5.38e-13 | 1 |
lymphosarcoma | 5.38e-13 | 1 |
lymphoma | 3.88e-11 | 10 |
hematologic cancer | 5.83e-08 | 51 |
immune system cancer | 5.83e-08 | 51 |
peripheral nerve sheath neoplasm | 4.69e-07 | 2 |
neurofibroma | 4.69e-07 | 2 |