FFCP PHASE1:Hg19::chr12:70637205..70637233,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4848 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7878 | |||
|TSSclassifier=strong | |||
|UniProt=F8VSK9,F8VUB4,F8VQF4,F8W145 | |||
|association_with_transcript=0bp_to_ENST00000547321,ENST00000548021,ENST00000548741,ENST00000549443,ENST00000550641,ENST00000551179,ENST00000552422,ENST00000552483,ENST00000552915,ENST00000553020_5end | |||
|cluster_id=chr12:70637205..70637233,+ | |||
|coexpression_cluster_id=C181 | |||
|description=CAGE_peak_1_at_CNOT2_5end | |||
|id=chr12:70637205..70637233,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.82e-30!140;CL:0000037!4.55e-30!172;CL:0000566!4.55e-30!172;CL:0002032!6.70e-27!165;CL:0000837!6.70e-27!165;CL:0002031!2.22e-26!124;CL:0000988!7.12e-26!182;CL:0002087!2.19e-25!119;CL:0002057!3.39e-17!42;CL:0000860!9.90e-16!45;CL:0000763!1.29e-14!112;CL:0000049!1.29e-14!112;CL:0000839!4.35e-14!70;CL:0000557!1.18e-13!71;CL:0000766!1.96e-13!76;CL:0002009!1.48e-12!65;CL:0000542!3.66e-12!53;CL:0000051!3.66e-12!53;CL:0002194!4.51e-12!63;CL:0000576!4.51e-12!63;CL:0000040!4.51e-12!63;CL:0000559!4.51e-12!63;CL:0000838!7.62e-12!52;CL:0000791!1.66e-08!18;CL:0000789!1.66e-08!18;CL:0002420!1.66e-08!18;CL:0002419!1.66e-08!18;CL:0000790!1.66e-08!18;CL:0000084!5.24e-07!25;CL:0000827!5.24e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.28e-12;33!CL:0002057;1.28e-12;33!CL:0000576;9.68e-12;48!CL:0002087;7.32e-10;104!CL:0000791;1.64e-08;18!CL:0000789;1.64e-08;18!CL:0002419;1.64e-08;18!CL:0000766;3.06e-08;69!CL:0000473;7.88e-08;39!CL:0000234;7.88e-08;39!CL:0000542;9.68e-08;53!CL:0000738;3.07e-07;136!CL:0000084;4.92e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.24e-31,136;CL:0000037,4.32e-31,168;CL:0002032,7.16e-28,161;CL:0000837,7.16e-28,161;CL:0002031,1.30e-27,120;CL:0000988,1.86e-27,177;CL:0002087,1.27e-26,115;CL:0000860,3.39e-17,42;CL:0002057,3.39e-17,42;CL:0000763,1.93e-15,108;CL:0000049,1.93e-15,108;CL:0000839,2.79e-15,66;CL:0000557,8.43e-15,67;CL:0000766,1.68e-14,72;CL:0002009,1.05e-13,61;CL:0000473,2.99e-13,48;CL:0000234,2.99e-13,48;CL:0002194,3.27e-13,59;CL:0000576,3.27e-13,59;CL:0000040,3.27e-13,59;CL:0000559,3.27e-13,59;CL:0000542,3.66e-12,53;CL:0000051,3.66e-12,53;CL:0000838,7.62e-12,52;CL:0000791,1.66e-08,18;CL:0000789,1.66e-08,18;CL:0002420,1.66e-08,18;CL:0002419,1.66e-08,18;CL:0000790,1.66e-08,18;CL:0000084,5.24e-07,25;CL:0000827,5.24e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;2.09e-12;42!CL:0000790;1.64e-08;18!CL:0000051;9.68e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.62e-14!102;UBERON:0003061!1.62e-14!102;UBERON:0002193!6.84e-12!112;UBERON:0002371!2.82e-10!80;UBERON:0001474!3.75e-09!86;UBERON:0004765!5.77e-07!101;UBERON:0001434!5.77e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.10e-15,98;UBERON:0003061,2.10e-15,98;UBERON:0002193,1.38e-12,108;UBERON:0002371,4.37e-11,76;UBERON:0001474,7.65e-10,82;UBERON:0002405,1.14e-09,93;UBERON:0004765,8.65e-08,90 | |||
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| |||
|short_description=p1@CNOT2 | |||
}} |
Latest revision as of 15:03, 24 September 2015
Short description: | p1@CNOT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CNOT2_5end |
Coexpression cluster: | C181_liposarcoma_somatostatinoma_neuroblastoma_mesothelioma_nonsmall_small_Alveolar |
Association with transcript: | 0bp_to_ENST00000547321, ENST00000548021, ENST00000548741, ENST00000549443, ENST00000550641, ENST00000551179, ENST00000552422, ENST00000552483, ENST00000552915, ENST00000553020_5end |
EntrezGene: | CNOT2 |
HGNC: | 7878 |
UniProt: | F8VSK9F8VUB4F8VQF4F8W145 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.10e-15 | 98 |
blood island | 2.10e-15 | 98 |
hemolymphoid system | 1.38e-12 | 108 |
bone marrow | 4.37e-11 | 76 |
bone element | 7.65e-10 | 82 |
immune system | 1.14e-09 | 93 |
skeletal element | 8.65e-08 | 90 |