FFCP PHASE1:Hg19::chr12:6658040..6658053,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25900 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24970 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y4M3,Q6P593 | |||
|association_with_transcript=220bp_to_uc001qoz.1,uc001qpa.1,uc001qpg.2_5end | |||
|cluster_id=chr12:6658040..6658053,- | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_10_at_IFFO1_5end | |||
|id=chr12:6658040..6658053,- | |||
|ontology_enrichment_celltype=CL:0002057!5.78e-41!42;CL:0000860!1.57e-37!45;CL:0002194!2.31e-28!63;CL:0000576!2.31e-28!63;CL:0000040!2.31e-28!63;CL:0000559!2.31e-28!63;CL:0002009!3.60e-27!65;CL:0000839!1.73e-24!70;CL:0000557!5.34e-24!71;CL:0000766!9.60e-22!76;CL:0000763!1.97e-13!112;CL:0000049!1.97e-13!112;CL:0002087!2.20e-10!119;CL:0002031!1.33e-09!124;CL:0002320!6.98e-08!365;CL:0000048!1.32e-07!430;CL:0000738!1.61e-07!140;CL:0000134!1.88e-07!358;CL:0000723!2.95e-07!436;CL:0000219!4.31e-07!390;CL:0000034!8.27e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.41e-105;33!CL:0002057;4.41e-105;33!CL:0000473;1.11e-73;39!CL:0000234;1.11e-73;39!CL:0000576;5.57e-51;48!CL:0000766;1.80e-24;69!CL:0000763;1.29e-13;100!CL:0002087;2.20e-11;104!CL:0000738;1.19e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.44e-88,42;CL:0002057,5.44e-88,42;CL:0000473,1.25e-76,48;CL:0000234,1.25e-76,48;CL:0002194,1.03e-60,59;CL:0000576,1.03e-60,59;CL:0000040,1.03e-60,59;CL:0000559,1.03e-60,59;CL:0002009,1.16e-58,61;CL:0000839,4.64e-54,66;CL:0000557,3.20e-53,67;CL:0000766,2.28e-49,72;CL:0000763,4.76e-32,108;CL:0000049,4.76e-32,108;CL:0002087,6.32e-30,115;CL:0002031,1.47e-28,120;CL:0000738,7.47e-25,136;CL:0002032,1.60e-20,161;CL:0000837,1.60e-20,161;CL:0000037,1.55e-19,168;CL:0000988,2.20e-18,177;CL:0000134,1.59e-08,354;CL:0002320,2.73e-08,361;CL:0000219,1.83e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.02e-67;42!CL:0000049;5.84e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.69e-21!80;UBERON:0001474!2.84e-19!86;UBERON:0002390!1.31e-15!102;UBERON:0003061!1.31e-15!102;UBERON:0004765!6.73e-15!101;UBERON:0001434!6.73e-15!101;UBERON:0002405!1.29e-14!115;UBERON:0002193!3.04e-14!112;UBERON:0002204!1.04e-11!167;UBERON:0003081!1.60e-08!216;UBERON:0002384!1.02e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.20e-46,76;UBERON:0001474,4.69e-43,82;UBERON:0004765,5.31e-39,90;UBERON:0002405,1.17e-37,93;UBERON:0002390,1.34e-35,98;UBERON:0003061,1.34e-35,98;UBERON:0001434,7.81e-35,100;UBERON:0002193,4.76e-32,108;UBERON:0002204,8.01e-22,167;UBERON:0003081,1.27e-15,203;UBERON:0000926,7.06e-09,315;UBERON:0004120,7.06e-09,315;UBERON:0006603,7.06e-09,315;UBERON:0002384,5.70e-08,371 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0.313454721478088,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0.257575567634187,3.19876125315042,3.02300754951048,6.0646015296954,1.16214518452842,2.46700732813095,2.78735733805593,0.28769239232215,3.33008918487831,2.83778675866302,0,0.645484683583826,1.35426486594342,1.88242339542605,3.547779950752,5.8428105955722,2.44867113896722,5.45579346029359,0.639337125799041,1.9791078011203,4.18873681005427,2.98357325372886,1.45104619314292,0.56738522469114,1.24564449799115,0.75374599577023,2.60741459210101,1.73751075764093,0,0.736555271975129,0.632924774881769,0,0,0,0.22465726229299,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206105058476878,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.299918973546171,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0.841980283299221,0,0,0.160853921143607,0,0,0.532685175939381,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.214840489736547,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0.333926115068718,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621262677827163,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,1.37280437475228,0,0,0,0,0,0,0.864221491201268,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0.189403005275089,0,0,0.228840068396924,0,0.310874401165561,0,0,0,0.465788870628778,0.414706207840855,0.797525143673985,0.521745061811734,0.150257608997218,0.380805212168795,0,0,0.322231671127465,0,0,0.400027764663154,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41023272848151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29787968637137,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@IFFO1 | |||
}} |
Latest revision as of 00:18, 20 September 2015
Short description: | p10@IFFO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_IFFO1_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 220bp_to_uc001qoz.1, uc001qpa.1, uc001qpg.2_5end |
EntrezGene: | IFFO1 |
HGNC: | 24970 |
UniProt: | Q9Y4M3Q6P593 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.44e-88 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.44e-88 | 42 |
defensive cell | 1.25e-76 | 48 |
phagocyte | 1.25e-76 | 48 |
monopoietic cell | 1.03e-60 | 59 |
monocyte | 1.03e-60 | 59 |
monoblast | 1.03e-60 | 59 |
promonocyte | 1.03e-60 | 59 |
macrophage dendritic cell progenitor | 1.16e-58 | 61 |
myeloid lineage restricted progenitor cell | 4.64e-54 | 66 |
granulocyte monocyte progenitor cell | 3.20e-53 | 67 |
myeloid leukocyte | 2.28e-49 | 72 |
myeloid cell | 4.76e-32 | 108 |
common myeloid progenitor | 4.76e-32 | 108 |
nongranular leukocyte | 6.32e-30 | 115 |
hematopoietic lineage restricted progenitor cell | 1.47e-28 | 120 |
leukocyte | 7.47e-25 | 136 |
hematopoietic oligopotent progenitor cell | 1.60e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-20 | 161 |
hematopoietic stem cell | 1.55e-19 | 168 |
hematopoietic cell | 2.20e-18 | 177 |
mesenchymal cell | 1.59e-08 | 354 |
connective tissue cell | 2.73e-08 | 361 |
motile cell | 1.83e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.20e-46 | 76 |
bone element | 4.69e-43 | 82 |
skeletal element | 5.31e-39 | 90 |
immune system | 1.17e-37 | 93 |
hematopoietic system | 1.34e-35 | 98 |
blood island | 1.34e-35 | 98 |
skeletal system | 7.81e-35 | 100 |
hemolymphoid system | 4.76e-32 | 108 |
musculoskeletal system | 8.01e-22 | 167 |
lateral plate mesoderm | 1.27e-15 | 203 |
mesoderm | 7.06e-09 | 315 |
mesoderm-derived structure | 7.06e-09 | 315 |
presumptive mesoderm | 7.06e-09 | 315 |
connective tissue | 5.70e-08 | 371 |