FFCP PHASE1:Hg19::chr12:6379598..6379608,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-7bp_to_ENST00000537967,ENST00000539998_5end | |||
|cluster_id=chr12:6379598..6379608,- | |||
|coexpression_cluster_id=C204 | |||
|description=CAGE_peak_1_at_ENST00000537967_5end,CAGE_peak_1_at_ENST00000539998_5end | |||
|id=chr12:6379598..6379608,- | |||
|ontology_enrichment_celltype=CL:0000159!7.75e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002539;3.81e-21;10!CL:0000359;4.53e-08;32!CL:0000192;2.32e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,3.81e-21,10;CL:0000359,1.18e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;2.32e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;3.81e-21;10!UBERON:0004695;3.81e-21;10!UBERON:0002111;3.81e-21;10!UBERON:0004178;3.81e-21;10!UBERON:0001135;1.22e-14;15!UBERON:0000947;6.74e-11;21!UBERON:0010191;6.74e-11;21!UBERON:0004573;2.32e-07;33!UBERON:0004571;2.32e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,3.81e-21,10;UBERON:0004695,3.81e-21,10;UBERON:0002111,3.81e-21,10;UBERON:0004178,3.81e-21,10;UBERON:0001135,1.22e-14,15;UBERON:0000947,6.74e-11,21;UBERON:0010191,6.74e-11,21;UBERON:0004573,1.82e-07,33;UBERON:0004571,1.82e-07,33 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.226864366320042,0,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,12.3213432070436,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0.108647371922008,0,0,0,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0.163565394255844,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0.342233301085281,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000537967,p1@ENST00000539998 | |||
}} |
Latest revision as of 11:12, 24 July 2015
Short description: | p1@ENST00000537967, p1@ENST00000539998 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000537967_5end, CAGE_peak_1_at_ENST00000539998_5end |
Coexpression cluster: | C204_Smooth_nasal_CD4_CD19_CD8_CD14_CD34 |
Association with transcript: | -7bp_to_ENST00000537967, ENST00000539998_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 3.81e-21 | 10 |
vascular associated smooth muscle cell | 1.18e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 3.81e-21 | 10 |
arterial system smooth muscle | 3.81e-21 | 10 |
artery smooth muscle tissue | 3.81e-21 | 10 |
aorta smooth muscle tissue | 3.81e-21 | 10 |
smooth muscle tissue | 1.22e-14 | 15 |
aorta | 6.74e-11 | 21 |
aortic system | 6.74e-11 | 21 |
systemic artery | 1.82e-07 | 33 |
systemic arterial system | 1.82e-07 | 33 |