FFCP PHASE1:Hg19::chr12:54651599..54651610,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23468 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1555 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-164bp_to_AB528597,EU446624,EU446784_5end | |||
|cluster_id=chr12:54651599..54651610,- | |||
|coexpression_cluster_id=C536 | |||
|description=CAGE_peak_40_at_CBX5_5end | |||
|id=chr12:54651599..54651610,- | |||
|ontology_enrichment_celltype=CL:0000667!9.71e-19!6;CL:0000058!9.71e-19!6;CL:0000138!9.71e-19!6;CL:0000153!3.32e-12!9;CL:0000447!3.32e-12!9;CL:0000327!8.25e-10!14 | |||
|ontology_enrichment_celltype_v019=CL:0000138;8.67e-59;6!CL:0000153;1.98e-39;9!CL:0000447;1.98e-39;9!CL:0000327;6.67e-24;15!CL:0000499;4.96e-13;28!CL:0000151;1.55e-09;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,7.47e-59,6;CL:0000138,7.47e-59,6;CL:0000153,1.80e-39,9;CL:0000447,1.80e-39,9;CL:0000327,6.29e-24,15;CL:0000499,4.81e-13,28;CL:0000151,3.10e-10,36 | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.61e-30;3!UBERON:0003057;5.61e-30;3!UBERON:0003918;8.09e-10;10!UBERON:0007687;8.09e-10;10 | |||
|ontology_enrichment_disease=DOID:3350!2.32e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:6193;2.09e-23;1!DOID:3350;2.07e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.10e-23,1;DOID:3350,2.07e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.86e-28!57;UBERON:0005068!2.86e-28!57;UBERON:0006241!2.86e-28!57;UBERON:0007135!2.86e-28!57;UBERON:0001017!4.38e-22!82;UBERON:0005743!1.03e-20!86;UBERON:0002616!2.41e-20!59;UBERON:0000955!2.03e-19!69;UBERON:0006238!2.03e-19!69;UBERON:0002020!1.67e-18!34;UBERON:0003528!1.67e-18!34;UBERON:0000073!4.73e-18!94;UBERON:0001016!4.73e-18!94;UBERON:0002780!6.14e-17!41;UBERON:0001890!6.14e-17!41;UBERON:0006240!6.14e-17!41;UBERON:0002791!6.45e-17!33;UBERON:0002346!9.67e-17!90;UBERON:0002298!1.63e-16!8;UBERON:0003080!1.95e-16!42;UBERON:0003075!2.06e-16!86;UBERON:0007284!2.06e-16!86;UBERON:0001893!2.56e-16!34;UBERON:0003076!4.38e-14!15;UBERON:0003057!4.38e-14!15;UBERON:0001869!5.84e-13!32;UBERON:0002619!4.83e-12!22;UBERON:0001950!4.59e-11!20;UBERON:0002420!4.98e-11!9;UBERON:0007245!4.98e-11!9;UBERON:0010009!4.98e-11!9;UBERON:0010011!4.98e-11!9;UBERON:0000454!4.98e-11!9;UBERON:0002308!7.95e-11!9;UBERON:0000125!7.95e-11!9;UBERON:0000956!2.20e-10!25;UBERON:0000203!2.20e-10!25;UBERON:0002240!3.60e-10!3;UBERON:0003056!4.96e-10!61;UBERON:0007023!1.13e-09!115;UBERON:0001896!2.20e-09!3;UBERON:0005290!2.20e-09!3;UBERON:0010096!2.20e-09!3;UBERON:0006331!2.92e-09!3;UBERON:0002771!3.99e-09!3;UBERON:0000349!5.83e-09!5;UBERON:0001871!9.00e-09!7;UBERON:0000025!1.16e-08!194;UBERON:0000988!1.31e-08!3;UBERON:0000153!2.10e-08!129;UBERON:0007811!2.10e-08!129;UBERON:0000033!3.11e-08!123;UBERON:0004733!8.62e-08!12;UBERON:0002028!8.62e-08!12;UBERON:0007277!8.62e-08!12;UBERON:0000200!1.75e-07!6;UBERON:0000924!2.58e-07!173;UBERON:0006601!2.58e-07!173;UBERON:0004732!3.88e-07!13;UBERON:0000475!5.41e-07!365;UBERON:0004121!5.55e-07!169;UBERON:0001875!5.83e-07!2;UBERON:0006514!5.83e-07!2;UBERON:0001876!8.27e-07!2;UBERON:0009663!9.91e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;5.61e-30;3!UBERON:0005174;5.61e-30;3!UBERON:0001137;5.61e-30;3!UBERON:0000489;1.57e-12;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,4.84e-30,3;UBERON:0005174,4.84e-30,3;UBERON:0001137,4.84e-30,3;UBERON:0000489,9.76e-12,31;UBERON:0003076,8.58e-07,15;UBERON:0003057,8.58e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,1.50401373190767,0.869079113764942,8.74814541756209,4.37971383272372,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.423863802319124,0,0.103052529238439,0,0,0.168776332241266,0.292311015483596,0,0,0,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.87532391201102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23581842213102,0,0,0,0,0.353024506766001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0.136203406111576,0,0,0.415440338029185,0,0,0.121499113316049,0,0,0,0,0,0,0,0,1.017074150619,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0.573409195690071,0.110929051536852,0.745156835296601,0.138348634936231,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.798169295285756,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0.588925401344836,1.18818560130834,1.6906229103336,0.169927114687817,0,0,0.0999411559249289,0,0,0,0,0,0.716697915757256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724030971033267,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p40@CBX5 | |||
}} |
Latest revision as of 05:27, 19 September 2015
Short description: | p40@CBX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_40_at_CBX5_5end |
Coexpression cluster: | C536_Chondrocyte_Mallassezderived_liver_mesothelioma_Adipocyte_serous_tenocyte |
Association with transcript: | -164bp_to_AB528597, EU446624, EU446784_5end |
EntrezGene: | CBX5 |
HGNC: | 1555 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 7.47e-59 | 6 |
chondrocyte | 7.47e-59 | 6 |
GAG secreting cell | 1.80e-39 | 9 |
carbohydrate secreting cell | 1.80e-39 | 9 |
extracellular matrix secreting cell | 6.29e-24 | 15 |
stromal cell | 4.81e-13 | 28 |
secretory cell | 3.10e-10 | 36 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 4.84e-30 | 3 |
dorsal region element | 4.84e-30 | 3 |
dorsum | 4.84e-30 | 3 |
cavitated compound organ | 9.76e-12 | 31 |
posterior neural tube | 8.58e-07 | 15 |
chordal neural plate | 8.58e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.10e-23 | 1 |
mesenchymal cell neoplasm | 2.07e-12 | 2 |