FFCP PHASE1:Hg19::chr12:48499826..48499879,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29843 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17927 | |||
|TSSclassifier=strong | |||
|UniProt=F8VRZ8 | |||
|association_with_transcript=0bp_to_ENST00000547181,ENST00000549882,ENST00000551798_5end | |||
|cluster_id=chr12:48499826..48499879,- | |||
|description=CAGE_peak_1_at_SENP1_5end | |||
|id=chr12:48499826..48499879,- | |||
|ontology_enrichment_celltype=CL:0000037!2.91e-33!172;CL:0000566!2.91e-33!172;CL:0000738!1.01e-30!140;CL:0002032!1.09e-30!165;CL:0000837!1.09e-30!165;CL:0000988!3.04e-29!182;CL:0002031!9.05e-25!124;CL:0002087!3.73e-23!119;CL:0000542!5.33e-18!53;CL:0000051!5.33e-18!53;CL:0000838!1.02e-17!52;CL:0000763!1.30e-13!112;CL:0000049!1.30e-13!112;CL:0000084!1.94e-10!25;CL:0000827!1.94e-10!25;CL:0000766!1.32e-09!76;CL:0000791!6.25e-09!18;CL:0000789!6.25e-09!18;CL:0002420!6.25e-09!18;CL:0002419!6.25e-09!18;CL:0000790!6.25e-09!18;CL:0000557!1.42e-08!71;CL:0000839!4.47e-08!70;CL:0000860!1.41e-07!45;CL:0002009!2.30e-07!65;CL:0000945!2.30e-07!24;CL:0000826!2.30e-07!24;CL:0002057!3.29e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000542;8.44e-11;53!CL:0000084;2.02e-10;25!CL:0000791;4.40e-09;18!CL:0000789;4.40e-09;18!CL:0002419;4.40e-09;18!CL:0002087;3.46e-08;104!CL:0000945;1.11e-07;24!CL:0000738;4.81e-07;136!CL:0000625;9.05e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.16e-33,168;CL:0000738,1.17e-30,136;CL:0002032,1.54e-30,161;CL:0000837,1.54e-30,161;CL:0000988,7.65e-30,177;CL:0002031,1.07e-24,120;CL:0002087,4.42e-23,115;CL:0000542,5.31e-18,53;CL:0000051,5.31e-18,53;CL:0000838,1.02e-17,52;CL:0000763,1.88e-13,108;CL:0000049,1.88e-13,108;CL:0000084,1.94e-10,25;CL:0000827,1.94e-10,25;CL:0000766,1.78e-09,72;CL:0000791,6.25e-09,18;CL:0000789,6.25e-09,18;CL:0002420,6.25e-09,18;CL:0002419,6.25e-09,18;CL:0000790,6.25e-09,18;CL:0000557,1.94e-08,67;CL:0000839,6.21e-08,66;CL:0000945,2.30e-07,24;CL:0000826,2.30e-07,24;CL:0002009,3.20e-07,61;CL:0000860,3.29e-07,42;CL:0002057,3.29e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000051;8.44e-11;53!CL:0000790;4.40e-09;18 | |||
|ontology_enrichment_disease=DOID:162!9.31e-10!235;DOID:14566!2.32e-09!239;DOID:0050687!7.05e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.30e-10,235;DOID:14566,2.27e-09,239;DOID:0050687,7.05e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.44e-12!102;UBERON:0003061!1.44e-12!102;UBERON:0002193!1.54e-09!112;UBERON:0000178!1.97e-07!15;UBERON:0000179!1.97e-07!15;UBERON:0000463!1.97e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.48e-07;15!UBERON:0000179;3.48e-07;15!UBERON:0000463;3.48e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.07e-12,98;UBERON:0003061,2.07e-12,98;UBERON:0002193,2.56e-09,108;UBERON:0000178,1.96e-07,15;UBERON:0000179,1.96e-07,15;UBERON:0000463,1.96e-07,15 | |||
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| |||
|short_description=p1@SENP1 | |||
}} |
Latest revision as of 13:44, 18 September 2015
Short description: | p1@SENP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SENP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000547181, ENST00000549882, ENST00000551798_5end |
EntrezGene: | SENP1 |
HGNC: | 17927 |
UniProt: | F8VRZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.16e-33 | 168 |
leukocyte | 1.17e-30 | 136 |
hematopoietic oligopotent progenitor cell | 1.54e-30 | 161 |
hematopoietic multipotent progenitor cell | 1.54e-30 | 161 |
hematopoietic cell | 7.65e-30 | 177 |
hematopoietic lineage restricted progenitor cell | 1.07e-24 | 120 |
nongranular leukocyte | 4.42e-23 | 115 |
lymphocyte | 5.31e-18 | 53 |
common lymphoid progenitor | 5.31e-18 | 53 |
lymphoid lineage restricted progenitor cell | 1.02e-17 | 52 |
myeloid cell | 1.88e-13 | 108 |
common myeloid progenitor | 1.88e-13 | 108 |
T cell | 1.94e-10 | 25 |
pro-T cell | 1.94e-10 | 25 |
myeloid leukocyte | 1.78e-09 | 72 |
mature alpha-beta T cell | 6.25e-09 | 18 |
alpha-beta T cell | 6.25e-09 | 18 |
immature T cell | 6.25e-09 | 18 |
mature T cell | 6.25e-09 | 18 |
immature alpha-beta T cell | 6.25e-09 | 18 |
granulocyte monocyte progenitor cell | 1.94e-08 | 67 |
myeloid lineage restricted progenitor cell | 6.21e-08 | 66 |
lymphocyte of B lineage | 2.30e-07 | 24 |
pro-B cell | 2.30e-07 | 24 |
macrophage dendritic cell progenitor | 3.20e-07 | 61 |
classical monocyte | 3.29e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.29e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.07e-12 | 98 |
blood island | 2.07e-12 | 98 |
hemolymphoid system | 2.56e-09 | 108 |
blood | 1.96e-07 | 15 |
haemolymphatic fluid | 1.96e-07 | 15 |
organism substance | 1.96e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.30e-10 | 235 |
disease of cellular proliferation | 2.27e-09 | 239 |
cell type cancer | 7.05e-07 | 143 |