FFCP PHASE1:Hg19::chr12:47473898..47473903,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=347902 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24073 | |||
|TSSclassifier=strong | |||
|UniProt=Q86SJ2 | |||
|association_with_transcript=-164bp_to_ENST00000429635,NM_001143668,NM_181847,uc001rpk.2,uc001rpl.2,uc001rpm.2_5end | |||
|cluster_id=chr12:47473898..47473903,- | |||
|coexpression_cluster_id=C893 | |||
|description=CAGE_peak_11_at_AMIGO2_5end | |||
|id=chr12:47473898..47473903,- | |||
|ontology_enrichment_celltype=CL:0002076!3.33e-12!43;CL:0000066!1.46e-10!254;CL:0000223!1.53e-09!59;CL:0002368!8.19e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000244;6.22e-19;4!CL:0000731;6.22e-19;4!CL:0002166;7.12e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,4.01e-19,4;CL:0000731,4.01e-19,4;CL:0000066,6.01e-07,253;CL:0002166,6.36e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!1.29e-09!27;DOID:193!2.15e-09!29;DOID:2394!4.06e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:4929;7.63e-11;2!DOID:120;3.50e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,8.28e-11,2;DOID:120,2.42e-07,27;DOID:193,9.02e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0003886!1.40e-09!63;UBERON:0000464!2.15e-09!104;UBERON:0000466!2.87e-09!126;UBERON:0002553!8.62e-09!70;UBERON:0002323!4.17e-08!46;UBERON:0000992!5.85e-08!13;UBERON:0004119!2.25e-07!169;UBERON:0000925!2.25e-07!169;UBERON:0006595!2.25e-07!169;UBERON:0004458!3.79e-07!49;UBERON:0000365!6.78e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;5.24e-23;5!UBERON:0005910;3.88e-19;6!UBERON:0000486;3.03e-13;12!UBERON:0005911;7.88e-09;36!UBERON:0006554;1.82e-08;30!UBERON:0001008;1.82e-08;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,6.15e-23,5;UBERON:0005910,4.43e-19,6;UBERON:0005911,4.59e-09,82 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0.737201809504527,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,1.204823675113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0,0,0,0,0,0,0,0.221729397462564,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0.132409180813219,0,0,0,1.06748995729705,0.49333509683432,0,0.269421344139376,0.326923806226917,0,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0.340296549480063,0.358779271377724,0,0,0,0,0.772921620136887,0.37223371266318,0,0.194874010322397,0.252433774244115,0,0,0,0.302256294682921,0.508681776931463,0.773043412653187,1.09098448236334,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.277765335475589,0,0,0,0.231860809950154,0.352226082707465,0,0,0,0.790204397959275,0,0,0,0,0,1.34385702559088,1.41775097242386,0.53735113621709,0.290633938513962,0,0,0,0.207328115540772,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,1.16344544182,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.499864955910285,0,0,0,0.958499421966331,1.14861935834114,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0.664225598535437,1.10621501125022,0,0,0,0,0,0,0,0,0.30239029332968,0,0.767309866440312,0,0,1.02341449813341,0.804269605718038,2.96836132889982,0,0.177561725313127,0,0,0,0,1.40354529212299,0,0.229628896329213,0.182091168006717,0,1.80479845162965,1.00119938235739,0.784349769176855,0,0.633309773357254,0,0,0.431831832204279,0,1.62567862526312,0,0.254876273045038,0,0.895499018888713,0,0,0,0,0,0,0.0915694648183434,0,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0.661139661443912,0.960950336825531,0.893288987462089,0.10115778085555,0,0,0,0.308033580176089,0,0,0,1.00187420719394,0.372158369359667,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0.818999468447914,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0.563391205064483,0.143411352204052,0.0982490410131212,0.7133421029625,0,0,0,0,0,0.48111056362756,1.34060455107157,0,0.188287601553558,2.58303223602738,1.68471475667626,1.33029046061003,2.75668080248351,0,0,0.569647187174163,0,0,0,0,0,0.854592569019785,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0.715880777515084,0,0,1.88723537409386,0.358042349351218,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.455173793141999,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0.227884111694002,0,0.269272933229316,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,1.46909527343233,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,1.99396161812156,0,0.941798755221676,0,1.70765727617876,0,0.173559738335131,0.783939179315021,0.0870592065804026,0,0,0,0.0730893170861856,0,0,0,0,1.37041924646751,0,0.0633107959558787,0.391102765469606,0.160317640503067,0.213452994739353,0.599428828746391,0.432271251462318,0,0,0.14405479798815,0.372757606696298,0,0.271808412147228,0.104602846312333,0.203996435272644,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,1.44119953416961,0,0,0,0,0.492137407573744,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0.209818352539992,0.105600336519406,0,0,0,0,0,0,0,0,1.19730191562487,0.410462603746695,0,0,0,0,0,0.13223260174269,1.19760786519031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,1.12482367165896,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0.228840068396924,0,0,0.295710299979268,1.75226443880073,0.449803112163605,0.776314784381297,0,1.32920857278997,0.521745061811734,1.05180326298053,0,0.813741466409323,0.909243296012797,0.644463342254931,0.928067519756987,1.59238355479446,0.400027764663154,0,0,0,0,0,0,1.58694147858591,0.231522474323834,2.44736704506468,0.358177682162975,0,0.219284049578707,0,0.192914038270915,0,0.76872455576384,0.345430341731199,0.607719912354764,0.138258436151731,0,0,0,0.327609848846413,0,0.633936370075881,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60399523799829,0,0,0,0,0,0,0,0.0691572524642179,0,0,0.392590874004102,0.11796972334774,0.366857197043358,1.96393632455575,1.90691047733584,0,0,0.150420656698515,0.80682027481408,0,0,0.163771917510097,2.21784129325568,0.0675375846183947,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0.115233987555779,0.342976018874837,0,0,0,0.111231401892069,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0.348724276104376,0,0.801711364730253,0.207216164163037,0.17071847709395,0,0,0,0.0852134047591577,0,0,0.31020638566432,1.91107787795487,0,0,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| |||
|short_description=p11@AMIGO2 | |||
}} |
Latest revision as of 12:14, 18 September 2015
Short description: | p11@AMIGO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_AMIGO2_5end |
Coexpression cluster: | C893_osteoclastoma_Urothelial_tubular_nonsmall_Mesenchymal_Renal_hepatic |
Association with transcript: | -164bp_to_ENST00000429635, NM_001143668, NM_181847, uc001rpk.2, uc001rpl.2, uc001rpm.2_5end |
EntrezGene: | AMIGO2 |
HGNC: | 24073 |
UniProt: | Q86SJ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 4.01e-19 | 4 |
urothelial cell | 4.01e-19 | 4 |
epithelial cell | 6.01e-07 | 253 |
epithelial cell of Malassez | 6.36e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
urothelium | 6.15e-23 | 5 |
transitional epithelium | 4.43e-19 | 6 |
endo-epithelium | 4.59e-09 | 82 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 8.28e-11 | 2 |
female reproductive organ cancer | 2.42e-07 | 27 |
reproductive organ cancer | 9.02e-07 | 29 |