FFCP PHASE1:Hg19::chr12:47472578..47472594,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=347902 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=24073 | |||
|TSSclassifier=strong | |||
|UniProt=Q86SJ2 | |||
|association_with_transcript=190bp_to_AY237005_5end | |||
|cluster_id=chr12:47472578..47472594,- | |||
|coexpression_cluster_id=C1169 | |||
|description=CAGE_peak_14_at_AMIGO2_5end | |||
|id=chr12:47472578..47472594,- | |||
|ontology_enrichment_celltype=CL:0002076!7.00e-11!43;CL:0000066!4.06e-10!254;CL:0000223!4.30e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.08e-22;4!CL:0000731;1.08e-22;4!CL:0002621;1.70e-13;3!CL:1001319;9.49e-11;1!CL:1000600;9.49e-11;1!CL:0002568;9.49e-11;1!CL:0002076;1.19e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.09e-22,4;CL:0000731,1.09e-22,4;CL:0002621,1.93e-13,3;CL:0000066,3.40e-12,253;CL:0002568,9.05e-11,1;CL:1001319,1.10e-10,1;CL:1000600,1.10e-10,1;CL:0002076,1.41e-07,42;CL:0000223,3.08e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!6.52e-09!27;DOID:193!4.73e-08!29 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.54e-10;4!DOID:1612;1.54e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.10e-10,4;DOID:1612,1.10e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0003729!5.39e-08!5;UBERON:0003343!7.21e-07!4;UBERON:0004785!7.21e-07!4;UBERON:0000365!8.21e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;2.95e-31;5!UBERON:0000486;2.48e-28;12!UBERON:0005910;4.17e-26;6!UBERON:0001949;1.70e-13;3!UBERON:0006554;3.37e-11;30!UBERON:0001008;3.37e-11;30!UBERON:0003350;3.71e-11;8!UBERON:0004645;9.49e-11;1!UBERON:0001256;9.49e-11;1!UBERON:0001259;9.49e-11;1!UBERON:0000344;9.89e-08;20!UBERON:0003729;4.66e-07;13!UBERON:0005911;5.91e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.33e-31,5;UBERON:0005910,4.60e-26,6;UBERON:0001949,1.93e-13,3;UBERON:0003350,4.20e-11,8;UBERON:0004645,1.10e-10,1;UBERON:0001256,1.10e-10,1;UBERON:0001259,1.10e-10,1;UBERON:0006554,2.46e-09,47;UBERON:0001008,3.99e-09,48;UBERON:0000344,9.89e-08,20;UBERON:0003729,4.51e-07,13 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515281080091258,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0.966304265816484,1.09098448236334,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0.185176890317059,0,0,0,0,0,0,0,0,2.37061319387782,1.71697232418975,0,0,0,0,1.51183915378974,0.708875486211932,0.806026704325635,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.718874566474748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,1.20303882181971,0,0,0,0.131124414959424,0,3.61972084390749,0,0,1.47772280450026,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0.574265537996172,1.30012049207304,0,0,0,0,0,0,0,0,0,0.495854746082934,0.576570202095319,1.14851441245126,0,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,0.192444225451024,0,1.08890984861323,0,2.58303223602738,0,2.21715076768338,25.9587442233864,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0,1.07842021376792,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,2.28525931422807,0,0,0,0,0.611030144933625,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0.569219092059585,0.277349346026277,0,0.293977192243133,0,0,0,0,0,0.0821154570532092,0,0,0,0.959293472527256,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0.271808412147228,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0.767660789277781,0,0.662091970365432,0,0,0,0,0,0.246277562248017,0.170388021785422,0,0,0,0.258565912723101,0.13223260174269,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0.249960815924213,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.318593534327405,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0.300515217994437,0.380805212168795,0,0,0.107410557042488,0.928067519756987,0,0,0,0,0,0,0,0,0.680117776536817,0.231522474323834,1.22368352253234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47221577751538,0.11796972334774,0.183428598521679,0.577628330751691,0.762764190934334,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0,0,0.171488009437418,0.135939465953663,0,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0.4582137370881,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0,0,0,0,0.401206833445841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,1.22104902916462,0,0,5.56916253060839,0,0.244482888365733,0,0,0,0 | |||
|short_description=p14@AMIGO2 | |||
}} |
Latest revision as of 12:05, 18 September 2015
Short description: | p14@AMIGO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_AMIGO2_5end |
Coexpression cluster: | C1169_Urothelial_meningioma_medulloblastoma_Prostate_fibrosarcoma_Anulus_Nucleus |
Association with transcript: | 190bp_to_AY237005_5end |
EntrezGene: | AMIGO2 |
HGNC: | 24073 |
UniProt: | Q86SJ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.09e-22 | 4 |
urothelial cell | 1.09e-22 | 4 |
gingival epithelial cell | 1.93e-13 | 3 |
epithelial cell | 3.40e-12 | 253 |
mesenchymal stem cell of Wharton's jelly | 9.05e-11 | 1 |
bladder cell | 1.10e-10 | 1 |
lower urinary tract cell | 1.10e-10 | 1 |
endo-epithelial cell | 1.41e-07 | 42 |
endodermal cell | 3.08e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
urothelium | 3.33e-31 | 5 |
transitional epithelium | 4.60e-26 | 6 |
gingival epithelium | 1.93e-13 | 3 |
epithelium of mucosa | 4.20e-11 | 8 |
urinary bladder urothelium | 1.10e-10 | 1 |
wall of urinary bladder | 1.10e-10 | 1 |
mucosa of urinary bladder | 1.10e-10 | 1 |
urinary system structure | 2.46e-09 | 47 |
renal system | 3.99e-09 | 48 |
mucosa | 9.89e-08 | 20 |
mouth mucosa | 4.51e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.10e-10 | 4 |
breast cancer | 1.10e-10 | 4 |