FFCP PHASE1:Hg19::chr12:4410648..4410662,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:4410648..4410662,+ | |||
|coexpression_cluster_id=C539 | |||
|description=CAGE_peak_at_chr12:4410648..4410662,+ | |||
|id=chr12:4410648..4410662,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.01e-10!115;UBERON:0001017!1.41e-07!82;UBERON:0002780!2.49e-07!41;UBERON:0001890!2.49e-07!41;UBERON:0006240!2.49e-07!41;UBERON:0003080!2.87e-07!42;UBERON:0001869!3.41e-07!32;UBERON:0002020!3.48e-07!34;UBERON:0003528!3.48e-07!34;UBERON:0001049!3.50e-07!57;UBERON:0005068!3.50e-07!57;UBERON:0006241!3.50e-07!57;UBERON:0007135!3.50e-07!57;UBERON:0001893!3.96e-07!34;UBERON:0005743!4.34e-07!86;UBERON:0000956!5.30e-07!25;UBERON:0000203!5.30e-07!25;UBERON:0002791!5.50e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;5.16e-07;25!UBERON:0000203;5.16e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.65e-08,114;UBERON:0001869,2.09e-07,32;UBERON:0003528,2.10e-07,34;UBERON:0002020,2.10e-07,34;UBERON:0002780,2.25e-07,41;UBERON:0001890,2.25e-07,41;UBERON:0003080,2.25e-07,41;UBERON:0006240,2.25e-07,41;UBERON:0001893,2.41e-07,34;UBERON:0010371,2.67e-07,104;UBERON:0002791,2.89e-07,32;UBERON:0000956,3.63e-07,25;UBERON:0000203,3.63e-07,25;UBERON:0001017,3.64e-07,81 | |||
|phase1_expression=1.81678379270557,1.49870366723688,1.40954404095971,3.00219895059391,3.12872766099101,0,0,10.1075179748293,3.3954131665979,7.86348596804828,0.697801167972428,8.51921351307672,10.0231451726812,0.123766352960047,0.662794751455832,12.101852636132,10.8485015044316,7.30310090387373,6.34312638427659,1.60057375499824,0.408001382488506,0.940364164434263,7.44213566540748,2.87436292653057,5.14724822338691,15.0534409323464,15.8454137638395,12.2001711036203,3.14691421479123,5.75744097145819,2.63187409637329,13.7913183671839,9.93979531968225,7.76483421350254,0,0,3.81680571135301,1.10799081706375,3.60980005446255,0.651032612147555,0.671746422719773,0.647787332037959,0,0.436194716338694,0,0.242584061187816,1.16214518452842,4.11167888021826,4.64559556342655,2.3015391385772,1.0246428261164,0.47296445977717,3.10271112662957,3.22742341791913,6.77132432971709,1.88242339542605,5.18521685109907,1.57306439111559,3.36692281607993,6.09765151444578,3.19668562899521,0.659702600373432,1.39624560335142,1.27867425159808,0.290209238628584,1.70215567407342,0.622822248995575,2.51248665256743,4.69334626578181,1.52032191293582,2.42159801053347,0.736555271975129,0,0,0,0,0.112328631146495,0.300353785683013,0,0,0,0,1.75996244461323,0.546138611262131,0.889509253863555,1.70692089026603,1.20118796110804,1.14950487990897,0.661044872784862,0,0,2.34894875748376,1.52909291250092,0,2.80254281490768,5.26768169550154,3.93419540227666,6.6811829667358,9.25206745497792,4.17966238476695,0.651844533267181,0,1.94826728407911,9.13565746458423,2.06224135232386,3.1014745241707,2.16643091012012,12.0405840542135,15.4770623596255,17.265979983386,9.39590060471884,10.4329110864619,1.33457906845854,0.535081656179426,1.04535523804977,7.47841661803937,1.14966148080576,1.37450978193052,2.53019692019503,3.82278497188916,3.25541726928209,1.90090408889675,2.40920190524436,4.60751800155906,1.24930726552346,1.65744076430812,2.46338399076314,3.62892137804518,8.02320587350522,5.21367853978076,2.43806866313962,0,3.32442660793179,0,0.50133791063589,0,0.795285947051099,3.40644409211845,0.378139268656271,1.33037638477538,0.351339142772504,1.5062593682237,10.5645633604837,11.8651021691017,0.97364218096405,0.696518949197069,1.59549552622638,0.238490624305342,0.571994910780128,0.371457501329565,0.79504962946682,0.860234595106124,0,0,1.25849830862972,1.10047216776027,1.04497483268405,2.84258435086262,1.06729878806013,4.01664735317604,17.7244899528025,7.60272105718513,19.0368404887572,2.20597848207521,7.29127753093584,0.357198913136319,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,7.75560528296651,13.5189156164186,3.47880366186723,0.886413581652058,3.04541115870403,0.286836620748814,0,2.80338800071154,1.06748995729705,0.98667019366864,0.311211035399766,0.538842688278752,1.14423332179421,1.81628913173918,0.576175924479999,3.28050004567315,1.87296046098192,0.570471821544449,1.94283284717341,2.3486899728753,1.45685649931318,2.10676210053373,0,0.982674538494144,0,0,0,0,2.15585442544872,1.17835279767846,1.00094815897571,0,0,0,0.150238058906597,2.1552114800404,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,20.2923895821462,16.6375133560409,22.0839538449533,6.95250124938694,3.71083351300159,7.32021840077966,4.97573064073778,5.04641701751257,0,0,0,0,2.3218396401599,2.88751792667834,0,0,0,0,0,0,0,0,0,0,1.40241773803446,3.7041661019826,0,0,0,0,0,0.245976877086227,0.857839051492628,39.9491038887397,2.24803506515239,5.83068039987459,27.8691219927174,2.93227474779292,0,0,1.15930404975077,1.05667824812239,2.7429625074604,2.77791307545966,4.37584550139576,0,0,0,1.63802985597466,0.445893486866185,12.185398418281,11.4227847175224,16.7294614746016,11.7321664740731,9.59091997096074,8.43441894163465,0,0.088048434013226,0.414656231081544,1.15295962733569,0.37872730027914,0,0,0,1.71072446022705,0.514137463516618,0,0,0.672786506072164,0.43596006883328,0.22001485746285,0.775630294546667,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,0,0.714889968290738,1.08524321078289,2.46972101034231,0.977208552881205,1.06617584622764,0.791951872933429,29.2396195747799,8.71533458600294,23.4936529277834,0,0,2.10833939483032,0.958499421966331,0,0,0.144781306667579,0,0.179060963239896,7.84596007954691,4.3346767244424,6.46882724578552,6.93052395910641,13.9752043322355,6.50699269288109,7.73288812777695,10.8885572467327,6.37938751653163,0.749007023947182,2.99161459204025,0,0.49076596687656,0,1.62759014219841,0,0,0,0,5.41702979509894,6.82222512167955,0,0.664225598535437,0,0.434418072340414,0.783204629850962,1.71571711905428,1.24060815673732,3.23571301227925,2.98837161849644,9.09382714338778,43.2732142727292,12.3980020265169,0.248107807818777,0.460385919864187,0.280660094433074,0.256278298511402,2.04682899626681,1.28683136914886,0,0.462629081407967,0.355123450626254,0.164254312027618,0,0.813472649219715,1.20859449591622,36.2916711248946,10.1289087829486,0.114814448164607,0,0.655622074797121,3.15839729035188,4.85196623757813,0,1.46139224653261,3.0609972378934,0,2.2112181685947,0,0,0.541892875087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| |||
|short_description=p@chr12:4410648..4410662,+ | |||
}} |
Latest revision as of 08:30, 24 July 2015
Short description: | p@chr12:4410648..4410662, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:4410648..4410662, + |
Coexpression cluster: | C539_teratocarcinoma_diffuse_Gingival_Placental_lymphangiectasia_mycosis_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.65e-08 | 114 |
cerebral hemisphere | 2.09e-07 | 32 |
brain grey matter | 2.10e-07 | 34 |
gray matter | 2.10e-07 | 34 |
regional part of forebrain | 2.25e-07 | 41 |
forebrain | 2.25e-07 | 41 |
anterior neural tube | 2.25e-07 | 41 |
future forebrain | 2.25e-07 | 41 |
telencephalon | 2.41e-07 | 34 |
ecto-epithelium | 2.67e-07 | 104 |
regional part of telencephalon | 2.89e-07 | 32 |
cerebral cortex | 3.63e-07 | 25 |
pallium | 3.63e-07 | 25 |
central nervous system | 3.64e-07 | 81 |