FFCP PHASE1:Hg19::chr12:41374792..41374806,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:41374792..41374806,+ | |||
|coexpression_cluster_id=C139 | |||
|description=CAGE_peak_at_chr12:41374792..41374806,+ | |||
|id=chr12:41374792..41374806,+ | |||
|ontology_enrichment_celltype=CL:0002580!3.67e-13!3;CL:0002605!5.14e-07!3;CL:0002319!5.36e-07!25;CL:0000221!5.40e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.22e-44;3!CL:0000128;5.22e-43;7!CL:0000126;5.22e-43;7!CL:0000127;5.22e-43;7!CL:0002319;7.32e-31;25!CL:0000243;2.85e-18;15!CL:0000125;2.85e-18;15!CL:0000047;1.27e-17;2!CL:0000095;1.94e-16;17!CL:0002166;2.45e-12;3!CL:0000540;8.25e-07;6!CL:0000404;8.25e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.22e-44,3;CL:0000128,5.22e-43,7;CL:0000126,5.22e-43,7;CL:0000127,5.22e-43,7;CL:0002453,5.22e-43,7;CL:0002319,7.55e-31,25;CL:0000243,2.85e-18,15;CL:0000125,2.85e-18,15;CL:0000030,2.85e-18,15;CL:0000339,2.85e-18,15;CL:0000047,2.19e-17,8;CL:0000221,1.82e-16,72;CL:0000095,1.94e-16,17;CL:0000123,1.94e-16,17;CL:0000133,5.56e-14,59;CL:0002166,2.31e-12,3;CL:0000333,1.11e-07,41;CL:0000540,8.48e-07,6;CL:0000031,8.48e-07,6;CL:0000404,8.48e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000339;2.85e-18;15!CL:0000133;4.94e-13;59!CL:0000221;2.35e-08;72!CL:0000031;8.25e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.04e-13!94;UBERON:0001016!1.04e-13!94;UBERON:0001017!2.55e-13!82;UBERON:0005743!1.63e-12!86;UBERON:0001869!1.17e-10!32;UBERON:0002791!2.73e-10!33;UBERON:0002020!6.08e-10!34;UBERON:0003528!6.08e-10!34;UBERON:0001893!6.08e-10!34;UBERON:0001049!3.64e-09!57;UBERON:0005068!3.64e-09!57;UBERON:0006241!3.64e-09!57;UBERON:0007135!3.64e-09!57;UBERON:0000956!4.73e-09!25;UBERON:0000203!4.73e-09!25;UBERON:0000955!3.06e-08!69;UBERON:0006238!3.06e-08!69;UBERON:0004121!3.53e-08!169;UBERON:0002780!5.65e-08!41;UBERON:0001890!5.65e-08!41;UBERON:0006240!5.65e-08!41;UBERON:0000924!7.13e-08!173;UBERON:0006601!7.13e-08!173;UBERON:0003080!9.56e-08!42;UBERON:0002616!2.46e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;1.38e-09;4!UBERON:0008895;1.38e-09;4!UBERON:0011159;6.34e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.13e-10,81;UBERON:0001708,1.32e-09,4;UBERON:0008895,1.32e-09,4;UBERON:0001016,2.02e-09,89;UBERON:0011159,6.13e-08,5;UBERON:0010188,8.02e-07,6;UBERON:0002539,8.02e-07,6;UBERON:0008816,8.02e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28988789704845,2.87436292653057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.818238361772504,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85569617938061,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,0,2.31986643833309,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0,0,0.482561763430822,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,58.4976863912325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63718706865481,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0.109940516745429,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560659312903067,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:41374792..41374806,+ | |||
}} |
Latest revision as of 08:26, 24 July 2015
Short description: | p@chr12:41374792..41374806, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:41374792..41374806, + |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.22e-44 | 3 |
oligodendrocyte | 5.22e-43 | 7 |
macroglial cell | 5.22e-43 | 7 |
astrocyte | 5.22e-43 | 7 |
oligodendrocyte precursor cell | 5.22e-43 | 7 |
neural cell | 7.55e-31 | 25 |
glial cell (sensu Vertebrata) | 2.85e-18 | 15 |
glial cell | 2.85e-18 | 15 |
glioblast | 2.85e-18 | 15 |
glioblast (sensu Vertebrata) | 2.85e-18 | 15 |
neuronal stem cell | 2.19e-17 | 8 |
ectodermal cell | 1.82e-16 | 72 |
neuron associated cell | 1.94e-16 | 17 |
neuron associated cell (sensu Vertebrata) | 1.94e-16 | 17 |
neurectodermal cell | 5.56e-14 | 59 |
epithelial cell of Malassez | 2.31e-12 | 3 |
migratory neural crest cell | 1.11e-07 | 41 |
neuron | 8.48e-07 | 6 |
neuroblast | 8.48e-07 | 6 |
electrically signaling cell | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.13e-10 | 81 |
jaw skeleton | 1.32e-09 | 4 |
splanchnocranium | 1.32e-09 | 4 |
nervous system | 2.02e-09 | 89 |
primary subdivision of cranial skeletal system | 6.13e-08 | 5 |
protuberance | 8.02e-07 | 6 |
pharyngeal arch | 8.02e-07 | 6 |
embryonic head | 8.02e-07 | 6 |