FFCP PHASE1:Hg19::chr12:28116221..28116235,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:28116221..28116235,- | |||
|coexpression_cluster_id=C812 | |||
|description=CAGE_peak_at_chr12:28116221..28116235,- | |||
|id=chr12:28116221..28116235,- | |||
|ontology_enrichment_celltype=CL:0002076!1.87e-18!43;CL:0002159!2.24e-14!13;CL:0000223!3.62e-12!59;CL:0002368!1.09e-10!13;CL:0002166!2.18e-10!3;CL:0002621!3.14e-10!3;CL:0000066!4.67e-10!254;CL:0002328!5.57e-10!3;CL:0000244!5.00e-08!4;CL:0000731!5.00e-08!4;CL:0000317!2.05e-07!2;CL:1000448!2.05e-07!2;CL:0002308!2.05e-07!2;CL:0002140!2.05e-07!2;CL:0002077!2.37e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0000244;2.01e-30;4!CL:0000731;2.01e-30;4!CL:0002166;9.07e-19;3!CL:0002621;1.62e-18;3!CL:0002076;5.08e-18;42!CL:0002159;1.44e-15;14!CL:0002251;8.08e-11;20!CL:0002368;1.01e-09;13!CL:0000317;3.81e-08;2!CL:1000448;3.81e-08;2!CL:0002308;3.81e-08;2!CL:0002140;3.81e-08;2!CL:0000362;6.99e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,9.47e-31,4;CL:0000731,9.47e-31,4;CL:0002076,2.50e-19,42;CL:0002166,1.14e-18,3;CL:0002621,1.77e-18,3;CL:0002159,1.65e-15,14;CL:0000223,8.40e-14,58;CL:0002251,7.67e-11,20;CL:0000066,3.03e-10,253;CL:0002368,1.20e-09,13;CL:0000317,3.82e-08,2;CL:1000448,3.82e-08,2;CL:0002308,3.82e-08,2;CL:0002140,3.82e-08,2;CL:0000362,7.21e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;8.53e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001708!6.17e-13!4;UBERON:0001704!6.17e-13!4;UBERON:0001949!3.14e-10!3;UBERON:0000365!3.46e-10!5;UBERON:0004815!5.57e-10!3;UBERON:0002031!5.57e-10!3;UBERON:0002090!1.32e-08!6;UBERON:0005910!1.76e-08!6;UBERON:0002185!1.44e-07!4;UBERON:0002419!2.05e-07!2;UBERON:0007771!2.05e-07!2;UBERON:0003297!2.05e-07!2;UBERON:0001821!2.05e-07!2;UBERON:0003487!2.05e-07!2;UBERON:0001820!2.05e-07!2;UBERON:0005089!2.05e-07!2;UBERON:0005088!2.05e-07!2;UBERON:0003129!7.75e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;1.73e-27;12!UBERON:0000365;1.72e-24;5!UBERON:0005910;1.57e-20;6!UBERON:0001949;1.62e-18;3!UBERON:0001708;2.49e-14;4!UBERON:0008895;2.49e-14;4!UBERON:0011159;1.18e-11;5!UBERON:0003729;1.01e-09;13!UBERON:0005911;1.62e-09;36!UBERON:0003929;1.78e-08;7!UBERON:0002419;3.81e-08;2!UBERON:0007771;3.81e-08;2!UBERON:0003297;3.81e-08;2!UBERON:0001821;3.81e-08;2!UBERON:0003487;3.81e-08;2!UBERON:0001820;3.81e-08;2!UBERON:0003350;1.59e-07;8!UBERON:0001828;1.59e-07;8!UBERON:0010371;4.65e-07;31!UBERON:0000161;8.12e-07;19!UBERON:0000166;8.12e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,9.41e-25,5;UBERON:0005910,9.53e-21,6;UBERON:0001949,1.77e-18,3;UBERON:0001708,2.95e-14,4;UBERON:0008895,2.95e-14,4;UBERON:0011159,1.35e-11,5;UBERON:0010188,8.11e-10,6;UBERON:0002539,8.11e-10,6;UBERON:0008816,8.11e-10,6;UBERON:0003729,9.76e-10,13;UBERON:0004119,1.12e-08,160;UBERON:0000925,1.12e-08,160;UBERON:0006595,1.12e-08,160;UBERON:0002419,3.82e-08,2;UBERON:0007771,3.82e-08,2;UBERON:0003297,3.82e-08,2;UBERON:0001821,3.82e-08,2;UBERON:0003487,3.82e-08,2;UBERON:0001820,3.82e-08,2;UBERON:0005089,3.82e-08,2;UBERON:0005088,3.82e-08,2;UBERON:0003102,7.83e-08,99;UBERON:0003350,1.65e-07,8;UBERON:0001828,1.65e-07,8;UBERON:0005911,2.07e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.204823675113,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0,0.515281080091258,0,0,0,0,0,0,0,0,0,0.57978255948989,1.63647672354501,1.14721838155602,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31700342490351,0,0.904760751704678,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.17587489739202,3.68615252830205,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,10.6268429260741,0.276242966807689,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,5.20048196829217,0,0,0,0,0,0,0,0,0,1.32227932288782,0.768760269460425,1.14851441245126,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,3.01353760869861,0,1.7737206141467,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.417687798021821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,1.39866726707491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0.235939446695481,1.46742878817343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:28116221..28116235,- | |||
}} |
Latest revision as of 07:55, 24 July 2015
Short description: | p@chr12:28116221..28116235, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:28116221..28116235, - |
Coexpression cluster: | C812_Prostate_Urothelial_Mallassezderived_Sebocyte_Keratinocyte_Gingival_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 9.47e-31 | 4 |
urothelial cell | 9.47e-31 | 4 |
endo-epithelial cell | 2.50e-19 | 42 |
epithelial cell of Malassez | 1.14e-18 | 3 |
gingival epithelial cell | 1.77e-18 | 3 |
general ecto-epithelial cell | 1.65e-15 | 14 |
endodermal cell | 8.40e-14 | 58 |
epithelial cell of alimentary canal | 7.67e-11 | 20 |
epithelial cell | 3.03e-10 | 253 |
respiratory epithelial cell | 1.20e-09 | 13 |
sebum secreting cell | 3.82e-08 | 2 |
epithelial cell of sweat gland | 3.82e-08 | 2 |
epithelial cell of skin gland | 3.82e-08 | 2 |
acinar cell of sebaceous gland | 3.82e-08 | 2 |
epidermal cell | 7.21e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
urothelium | 9.41e-25 | 5 |
transitional epithelium | 9.53e-21 | 6 |
gingival epithelium | 1.77e-18 | 3 |
jaw skeleton | 2.95e-14 | 4 |
splanchnocranium | 2.95e-14 | 4 |
primary subdivision of cranial skeletal system | 1.35e-11 | 5 |
protuberance | 8.11e-10 | 6 |
pharyngeal arch | 8.11e-10 | 6 |
embryonic head | 8.11e-10 | 6 |
mouth mucosa | 9.76e-10 | 13 |
endoderm-derived structure | 1.12e-08 | 160 |
endoderm | 1.12e-08 | 160 |
presumptive endoderm | 1.12e-08 | 160 |
skin gland | 3.82e-08 | 2 |
epidermis gland | 3.82e-08 | 2 |
gland of integumental system | 3.82e-08 | 2 |
sebaceous gland | 3.82e-08 | 2 |
skin sebaceous gland | 3.82e-08 | 2 |
sweat gland | 3.82e-08 | 2 |
sweat gland placode | 3.82e-08 | 2 |
sebaceous gland placode | 3.82e-08 | 2 |
surface structure | 7.83e-08 | 99 |
epithelium of mucosa | 1.65e-07 | 8 |
gingiva | 1.65e-07 | 8 |
endo-epithelium | 2.07e-07 | 82 |