FFCP PHASE1:Hg19::chr12:25150409..25150430,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=196415 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27282 | |||
|TSSclassifier=strong | |||
|UniProt=G3V1V6 | |||
|association_with_transcript=22bp_to_ENST00000549262_5end | |||
|cluster_id=chr12:25150409..25150430,- | |||
|coexpression_cluster_id=C96 | |||
|description=CAGE_peak_2_at_C12orf77_5end | |||
|id=chr12:25150409..25150430,- | |||
|ontology_enrichment_celltype=CL:0000945!9.30e-76!24;CL:0000826!9.30e-76!24;CL:0000542!9.47e-43!53;CL:0000051!9.47e-43!53;CL:0000838!2.28e-38!52;CL:0000817!1.87e-25!3;CL:0000236!5.54e-21!14;CL:0000785!8.08e-18!2;CL:0000955!8.08e-18!2;CL:0000818!8.08e-18!2;CL:0000954!8.08e-18!2;CL:0000816!8.08e-18!2;CL:0002087!2.95e-17!119;CL:0002031!2.43e-14!124;CL:0000738!3.06e-14!140;CL:0002032!1.21e-11!165;CL:0000837!1.21e-11!165;CL:0000037!4.76e-11!172;CL:0000566!4.76e-11!172;CL:0000988!2.80e-10!182;CL:0000946!6.88e-10!1;CL:0000786!6.88e-10!1;CL:0000980!6.88e-10!1;CL:0000819!1.15e-09!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.64e-52;24!CL:0000946;6.98e-21;1!CL:0000786;6.98e-21;1!CL:0000542;2.57e-14;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.84e-52,24;CL:0000826,5.84e-52,24;CL:0000542,9.69e-30,53;CL:0000051,9.69e-30,53;CL:0000838,6.42e-24,52;CL:0000946,6.31e-21,1;CL:0000786,6.31e-21,1;CL:0000980,6.31e-21,1;CL:0002087,2.08e-13,115;CL:0000738,2.76e-11,136;CL:0000785,3.70e-11,2;CL:0000955,3.70e-11,2;CL:0000818,3.70e-11,2;CL:0000954,3.70e-11,2;CL:0000816,3.70e-11,2;CL:0002031,4.23e-10,120;CL:0002032,1.81e-09,161;CL:0000837,1.81e-09,161;CL:0000037,4.70e-09,168;CL:0000988,1.44e-08,177;CL:0000817,7.26e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000051;2.57e-14;53!CL:0000954;3.89e-11;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.26e-29!10;DOID:2531!9.35e-15!51;DOID:0060083!9.35e-15!51;DOID:12603!4.09e-10!1;DOID:0060073!1.15e-09!1;DOID:8675!1.15e-09!1;DOID:4960!1.25e-09!1;DOID:0070004!1.25e-09!1;DOID:630!1.36e-09!1;DOID:0050177!1.36e-09!1;DOID:0050427!1.36e-09!1;DOID:2355!1.91e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:12603;2.08e-21;1!DOID:0060058;2.47e-18;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,1.88e-21,1;DOID:0060058,2.33e-18,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!9.18e-12!3;UBERON:0004854!9.18e-12!3;UBERON:0009034!9.18e-12!3;UBERON:0002095!9.18e-12!3;UBERON:0004782!9.18e-12!3;UBERON:0003281!9.18e-12!3;UBERON:0009664!9.18e-12!3;UBERON:0002296!9.18e-12!3;UBERON:0005602!9.18e-12!3;UBERON:0001179!9.18e-12!3;UBERON:0006293!9.18e-12!3;UBERON:0002372!8.91e-10!1;UBERON:0001961!8.91e-10!1;UBERON:0001744!8.91e-10!1;UBERON:0001735!8.91e-10!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36218985290986,3.28402357799783,4.171671409625,0,0,0,0,0,0,2.24654881682875,1.84820002233648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,1.32208974556972,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.27347302789153,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46151118057075,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,8.91137718514163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49804183822513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404112318087525,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p2@C12orf77 | |||
}} |
Latest revision as of 22:14, 17 September 2015
Short description: | p2@C12orf77 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C12orf77_5end |
Coexpression cluster: | C96_non_acute_tonsil_spleen_Burkitt_lymphoma_appendix |
Association with transcript: | 22bp_to_ENST00000549262_5end |
EntrezGene: | C12orf77 |
HGNC: | 27282 |
UniProt: | G3V1V6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.84e-52 | 24 |
pro-B cell | 5.84e-52 | 24 |
lymphocyte | 9.69e-30 | 53 |
common lymphoid progenitor | 9.69e-30 | 53 |
lymphoid lineage restricted progenitor cell | 6.42e-24 | 52 |
antibody secreting cell | 6.31e-21 | 1 |
plasma cell | 6.31e-21 | 1 |
plasmablast | 6.31e-21 | 1 |
nongranular leukocyte | 2.08e-13 | 115 |
leukocyte | 2.76e-11 | 136 |
mature B cell | 3.70e-11 | 2 |
pre-B-II cell | 3.70e-11 | 2 |
transitional stage B cell | 3.70e-11 | 2 |
small pre-B-II cell | 3.70e-11 | 2 |
immature B cell | 3.70e-11 | 2 |
hematopoietic lineage restricted progenitor cell | 4.23e-10 | 120 |
hematopoietic oligopotent progenitor cell | 1.81e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.81e-09 | 161 |
hematopoietic stem cell | 4.70e-09 | 168 |
hematopoietic cell | 1.44e-08 | 177 |
precursor B cell | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.88e-21 | 1 |
lymphoma | 2.33e-18 | 10 |