FFCP PHASE1:Hg19::chr12:14518565..14518580,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55729 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20092 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-29bp_to_ENST00000539659_5end | |||
|cluster_id=chr12:14518565..14518580,+ | |||
|description=CAGE_peak_3_at_ATF7IP_5end | |||
|id=chr12:14518565..14518580,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.53e-08!18;CL:0000789!3.53e-08!18;CL:0002420!3.53e-08!18;CL:0002419!3.53e-08!18;CL:0000790!3.53e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.59e-08;18!CL:0000789;1.59e-08;18!CL:0002419;1.59e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.87e-08,18;CL:0000789,2.87e-08,18;CL:0002420,2.87e-08,18;CL:0002419,2.87e-08,18;CL:0000790,2.87e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000790;1.59e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.41e-26!115;UBERON:0001049!9.90e-12!57;UBERON:0005068!9.90e-12!57;UBERON:0006241!9.90e-12!57;UBERON:0007135!9.90e-12!57;UBERON:0002616!3.39e-10!59;UBERON:0001017!3.45e-09!82;UBERON:0002346!1.85e-08!90;UBERON:0002780!1.99e-08!41;UBERON:0001890!1.99e-08!41;UBERON:0006240!1.99e-08!41;UBERON:0005743!2.03e-08!86;UBERON:0003080!4.22e-08!42;UBERON:0003075!5.38e-08!86;UBERON:0007284!5.38e-08!86;UBERON:0000955!7.35e-08!69;UBERON:0006238!7.35e-08!69;UBERON:0000073!4.85e-07!94;UBERON:0001016!4.85e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.06e-08;114!UBERON:0000073;1.36e-07;53!UBERON:0002616;1.36e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.89e-26,114;UBERON:0001049,1.70e-12,56;UBERON:0005068,1.70e-12,56;UBERON:0006241,1.70e-12,56;UBERON:0007135,1.70e-12,56;UBERON:0000073,2.46e-11,53;UBERON:0002616,2.46e-11,53;UBERON:0001017,1.64e-09,81;UBERON:0002346,2.33e-09,86;UBERON:0003075,7.03e-09,82;UBERON:0007284,7.03e-09,82;UBERON:0002780,8.99e-09,41;UBERON:0001890,8.99e-09,41;UBERON:0003080,8.99e-09,41;UBERON:0006240,8.99e-09,41;UBERON:0000955,2.36e-08,68;UBERON:0006238,2.36e-08,68;UBERON:0001016,6.00e-08,89;UBERON:0001893,7.36e-07,34 | |||
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| |||
|short_description=p3@ATF7IP | |||
}} |
Latest revision as of 13:07, 17 September 2015
Short description: | p3@ATF7IP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ATF7IP_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000539659_5end |
EntrezGene: | ATF7IP |
HGNC: | 20092 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.87e-08 | 18 |
alpha-beta T cell | 2.87e-08 | 18 |
immature T cell | 2.87e-08 | 18 |
mature T cell | 2.87e-08 | 18 |
immature alpha-beta T cell | 2.87e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.89e-26 | 114 |
neural tube | 1.70e-12 | 56 |
neural rod | 1.70e-12 | 56 |
future spinal cord | 1.70e-12 | 56 |
neural keel | 1.70e-12 | 56 |
regional part of nervous system | 2.46e-11 | 53 |
regional part of brain | 2.46e-11 | 53 |
central nervous system | 1.64e-09 | 81 |
neurectoderm | 2.33e-09 | 86 |
neural plate | 7.03e-09 | 82 |
presumptive neural plate | 7.03e-09 | 82 |
regional part of forebrain | 8.99e-09 | 41 |
forebrain | 8.99e-09 | 41 |
anterior neural tube | 8.99e-09 | 41 |
future forebrain | 8.99e-09 | 41 |
brain | 2.36e-08 | 68 |
future brain | 2.36e-08 | 68 |
nervous system | 6.00e-08 | 89 |
telencephalon | 7.36e-07 | 34 |