FFCP PHASE1:Hg19::chr12:131576196..131576201,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283383 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19893 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-255bp_to_ENST00000536988_5end | |||
|cluster_id=chr12:131576196..131576201,+ | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_9_at_GPR133_5end | |||
|id=chr12:131576196..131576201,+ | |||
|ontology_enrichment_celltype=CL:0000453!4.40e-34!5;CL:0000738!1.82e-28!140;CL:0000080!3.61e-27!6;CL:0000988!7.12e-27!182;CL:0000037!2.73e-22!172;CL:0000566!2.73e-22!172;CL:0000451!9.20e-22!10;CL:0000623!8.43e-20!3;CL:0000825!8.43e-20!3;CL:0000990!7.10e-19!8;CL:0002032!7.85e-18!165;CL:0000837!7.85e-18!165;CL:0001014!7.36e-15!2;CL:0001016!7.36e-15!2;CL:0002031!9.34e-15!124;CL:0002087!1.40e-13!119;CL:0000838!7.65e-13!52;CL:0000542!1.46e-12!53;CL:0000051!1.46e-12!53;CL:0000767!2.41e-09!3;CL:0000842!3.24e-09!3;CL:0000134!4.10e-08!358;CL:0002320!7.36e-08!365;CL:0000946!1.87e-07!1;CL:0000786!1.87e-07!1;CL:0000980!1.87e-07!1;CL:0000763!2.78e-07!112;CL:0000049!2.78e-07!112;CL:0002393!3.81e-07!9;CL:0002397!3.81e-07!9;CL:0000224!4.03e-07!4;CL:0000219!5.81e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000453;1.03e-122;5!CL:0000990;1.73e-68;8!CL:0000451;3.78e-56;10!CL:0001014;8.82e-51;2!CL:0001016;8.82e-51;2!CL:0000840;1.03e-17;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,8.05e-123,5;CL:0000990,1.51e-68,8;CL:0000451,3.38e-56,10;CL:0001014,8.82e-51,2;CL:0001016,8.82e-51,2;CL:0000840,1.03e-17,5;CL:0001029,1.03e-17,5;CL:0000988,6.97e-09,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!4.66e-08!1;DOID:0060061!4.66e-08!1;DOID:8691!4.66e-08!1;DOID:630!5.33e-08!1;DOID:0050177!5.33e-08!1;DOID:0050427!5.33e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!9.02e-11!15;UBERON:0000179!9.02e-11!15;UBERON:0000463!9.02e-11!15;UBERON:0002390!3.30e-08!102;UBERON:0003061!3.30e-08!102;UBERON:0002384!1.64e-07!375;UBERON:0002193!2.88e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;6.92e-23;10!UBERON:0000178;1.59e-15;15!UBERON:0000179;1.59e-15;15!UBERON:0000463;1.59e-15;15!UBERON:0000478;5.74e-10;24!UBERON:0002390;1.04e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,7.46e-23,10;UBERON:0000358,7.46e-23,10;UBERON:0000307,7.46e-23,10;UBERON:0000091,7.46e-23,10;UBERON:0000087,7.46e-23,10;UBERON:0007010,7.46e-23,10;UBERON:0007806,7.46e-23,10;UBERON:0008780,7.46e-23,10;UBERON:0005728,7.46e-23,10;UBERON:0000178,1.67e-15,15;UBERON:0000179,1.67e-15,15;UBERON:0000463,1.67e-15,15;UBERON:0000478,5.92e-10,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.393553906568396,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.868043482863407,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85477467284809,1.11207545051853,1.77517314159274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.5221541791135,28.6306723186441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36402216187572,1.99297260470045,1.63565394255844,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p9@GPR133 | |||
}} |
Latest revision as of 09:21, 17 September 2015
Short description: | p9@GPR133 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GPR133_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | -255bp_to_ENST00000536988_5end |
EntrezGene: | GPR133 |
HGNC: | 19893 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 8.05e-123 | 5 |
conventional dendritic cell | 1.51e-68 | 8 |
dendritic cell | 3.38e-56 | 10 |
CD1a-positive Langerhans cell | 8.82e-51 | 2 |
immature CD1a-positive Langerhans cell | 8.82e-51 | 2 |
immature conventional dendritic cell | 1.03e-17 | 5 |
common dendritic progenitor | 1.03e-17 | 5 |
hematopoietic cell | 6.97e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 7.46e-23 | 10 |
blastocyst | 7.46e-23 | 10 |
blastula | 7.46e-23 | 10 |
bilaminar disc | 7.46e-23 | 10 |
inner cell mass | 7.46e-23 | 10 |
cleaving embryo | 7.46e-23 | 10 |
connecting stalk | 7.46e-23 | 10 |
inner cell mass derived epiblast | 7.46e-23 | 10 |
extraembryonic mesoderm | 7.46e-23 | 10 |
blood | 1.67e-15 | 15 |
haemolymphatic fluid | 1.67e-15 | 15 |
organism substance | 1.67e-15 | 15 |
extraembryonic structure | 5.92e-10 | 24 |