FFCP PHASE1:Hg19::chr12:127256772..127256813,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387895 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000536517,NR_033878,uc001uhk.3_5end | |||
|cluster_id=chr12:127256772..127256813,- | |||
|description=CAGE_peak_1_at_LOC387895_5end | |||
|id=chr12:127256772..127256813,- | |||
|ontology_enrichment_celltype=CL:0000542!4.26e-19!53;CL:0000051!4.26e-19!53;CL:0000838!2.12e-18!52;CL:0000791!3.80e-15!18;CL:0000789!3.80e-15!18;CL:0002420!3.80e-15!18;CL:0002419!3.80e-15!18;CL:0000790!3.80e-15!18;CL:0002087!3.15e-14!119;CL:0000084!4.19e-12!25;CL:0000827!4.19e-12!25;CL:0000738!6.65e-12!140;CL:0002031!8.68e-11!124;CL:0000625!4.37e-10!11;CL:0000037!3.74e-08!172;CL:0000566!3.74e-08!172;CL:0000988!1.08e-07!182;CL:0002032!1.75e-07!165;CL:0000837!1.75e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.21e-27;18!CL:0000789;2.21e-27;18!CL:0002419;2.21e-27;18!CL:0000084;1.25e-20;25!CL:0000625;3.68e-19;11!CL:0000542;7.06e-13;53!CL:0000624;2.86e-08;6!CL:0002087;7.06e-08;104!CL:0000623;4.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.52e-27,18;CL:0000789,1.52e-27,18;CL:0002420,1.52e-27,18;CL:0002419,1.52e-27,18;CL:0000790,1.52e-27,18;CL:0000542,1.07e-24,53;CL:0000051,1.07e-24,53;CL:0000838,1.94e-23,52;CL:0000084,8.74e-21,25;CL:0000827,8.74e-21,25;CL:0000625,3.16e-19,11;CL:0002087,1.23e-17,115;CL:0000738,7.10e-15,136;CL:0002031,1.57e-12,120;CL:0000037,2.04e-10,168;CL:0000988,5.79e-10,177;CL:0002032,2.89e-09,161;CL:0000837,2.89e-09,161;CL:0000624,2.48e-08,6;CL:0000623,4.49e-07,3;CL:0000825,4.49e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.21e-27;18!CL:0000051;7.06e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;6.91e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.26e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000178!5.18e-07!15;UBERON:0000179!5.18e-07!15;UBERON:0000463!5.18e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;1.20e-09;32!UBERON:0002193;1.19e-08;42!UBERON:0000178;1.41e-07;15!UBERON:0000179;1.41e-07;15!UBERON:0000463;1.41e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.07e-07,15;UBERON:0000179,1.07e-07,15;UBERON:0000463,1.07e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,2.52687949370732,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.57470412614962,0.236132343941038,0.786728553697808,12.2825407391108,1.08371286321253,0,0,0,0,0,0,0.553995408531877,4.01088894940283,3.90619567288533,0.447830948479849,2.91504299417082,1.03030227053675,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0,0,0,0.236482229888585,1.03423704220986,0,1.35426486594342,0,0,0.224723484445085,0.306083892370903,0,0,0,0.199463657621632,0,0.290209238628584,0,1.24564449799115,0.502497330513487,0,0,1.21079900526674,0,0.632924774881769,0,0,0,0,0,0,0,0,0.182664153764634,1.75996244461323,0.546138611262131,2.66852776159066,1.28019066769952,0.400395987036012,0,0.661044872784862,0.954053754535364,5.69212969109448,9.98303221930596,5.73409842187843,0,1.68152568894461,0,4.13090517239049,2.35806457649499,5.34563897398724,0,0.32592226663359,1.4203434172042,1.94826728407911,5.12488101671798,2.94605907474837,2.43687284041983,0.541607727530031,1.66518715643378,0.650296737799391,0.164437904603676,0,0,0.444859689486181,0,0,1.58633079776593,5.74830740402882,4.81078423675682,3.28925599625354,2.22995790026868,3.90650072313851,1.90090408889675,3.46322773878877,7.29523683580185,1.24930726552346,4.02521328474829,1.64225599384209,3.42731463482045,11.2324882229073,6.66192257860875,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0.408308342509787,0,0.103325781175765,0,0.247266929278557,1.82032272387605,1.43723628363248,0,0,0.554128230968366,0.438977620880838,0.612975591598039,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0.504867548488229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.723906533337896,0.410952645100767,0.716243852959582,4.9317463357152,2.56139988262505,20.2689920367946,18.0963681154445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.702848489956279,0,0,0,0,0,0,0,0,1.6541442089831,1.94142780736755,4.05564719653088,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.355123450626254,0,0.519254429183621,0.232420756919918,0,0,0,0,0,1.83574180943194,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,1.19040304263846,1.81520899825294,0,0,0,1.16004861950546,0.154048617114644,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0.731140468893853,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0.6196469961995,0,0,0,0,1.06428319221179,0.633322905892992,0.987884678879706,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,1.42939065274673,1.64544909234478,1.94541993357815,2.16012574895246,0,0,0,0.980160863924127,2.60124445176006,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0.556812347790485,0,0.270455678475983,0,1.4098700508785,0.37428108081644,0.146508179271894,0,0.445773537109913,0.284136146806413,0.23874448473769,0,0,0,0,5.23150913607658,0,0,0,0.276283915531148,0,0.613612095012929,0.123084805461069,0,1.07842021376792,0,0,0.295930216910801,0,0,0,0,0,0,0.0874599999961957,0.724999575434793,1.137934482855,3.81380475439149,0.472775363535873,0,0,0,0,0,0,0,0.295547618953547,0,0.10893846351899,0.278847488557207,0.230850775511391,0.91153644677601,0,0,0,0,0,0,0,0,0,0.225595660617181,0.392125068635479,0.167821586975843,0,0,1.89898258075224,2.12202650606892,0,0,0.995261931078505,0.530745387020035,0,2.37216902944498,0.370691816839509,0.417687798021821,0.134802265961354,0,0,0.364909578431332,0.978323094660449,0,0,0,0,0.379119477770928,1.05226393590145,0,0,0.992975867626496,0.627865836814451,0,2.56148591426813,0,0,0.881931576729399,7.74826938565583,0.17472666824203,0.51595809741485,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0,0,2.46675464364152,7.35244063301062,0.0633107959558787,0,1.44285876452761,0.426905989478705,0,0,0,0,0.288109595976299,4.72159635148644,1.17847017308398,0.67952103036807,0.941425616810999,0.101998217636322,0.866851769704557,0,0,0,0,2.62887354279315,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0,0,1.37798474120648,0,0,0.272406812223151,0,0,0,0.2249738915515,0,0.121499113316049,0,0.315222829196793,0.104909176269996,0.422401346077626,0.35857467866569,0.191915197319445,0,0,0,0,0,0,0,0,1.87426823963964,2.26624183040251,0.146552233678082,0,0,0.13223260174269,0,0.704815022316672,1.60181118851542,0,0.828478110694391,2.48083010905975,0.988058159489721,6.21142251742569,6.38341257770182,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.124192805882767,0.691743174681154,0.37494122388632,0,0.856396000634902,1.6468607378872,0,0,0,0.233713309847224,0,2.08343305802598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| |||
|short_description=p1@LOC387895 | |||
}} |
Latest revision as of 06:24, 17 September 2015
Short description: | p1@LOC387895 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC387895_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000536517, NR_033878, uc001uhk.3_5end |
EntrezGene: | LOC387895 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.52e-27 | 18 |
alpha-beta T cell | 1.52e-27 | 18 |
immature T cell | 1.52e-27 | 18 |
mature T cell | 1.52e-27 | 18 |
immature alpha-beta T cell | 1.52e-27 | 18 |
lymphocyte | 1.07e-24 | 53 |
common lymphoid progenitor | 1.07e-24 | 53 |
lymphoid lineage restricted progenitor cell | 1.94e-23 | 52 |
T cell | 8.74e-21 | 25 |
pro-T cell | 8.74e-21 | 25 |
CD8-positive, alpha-beta T cell | 3.16e-19 | 11 |
nongranular leukocyte | 1.23e-17 | 115 |
leukocyte | 7.10e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 1.57e-12 | 120 |
hematopoietic stem cell | 2.04e-10 | 168 |
hematopoietic cell | 5.79e-10 | 177 |
hematopoietic oligopotent progenitor cell | 2.89e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.89e-09 | 161 |
CD4-positive, alpha-beta T cell | 2.48e-08 | 6 |
natural killer cell | 4.49e-07 | 3 |
pro-NK cell | 4.49e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.07e-07 | 15 |
haemolymphatic fluid | 1.07e-07 | 15 |
organism substance | 1.07e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.26e-07 | 14 |