FFCP PHASE1:Hg19::chr12:123373187..123373212,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=54bp_to_AK022083_5end | |||
|cluster_id=chr12:123373187..123373212,- | |||
|coexpression_cluster_id=C692 | |||
|description=CAGE_peak_1_at_AK022083_5end | |||
|id=chr12:123373187..123373212,- | |||
|ontology_enrichment_celltype=CL:0000037!2.27e-27!172;CL:0000566!2.27e-27!172;CL:0002032!1.19e-26!165;CL:0000837!1.19e-26!165;CL:0000988!3.62e-25!182;CL:0000763!3.72e-23!112;CL:0000049!3.72e-23!112;CL:0000738!5.00e-23!140;CL:0002057!3.46e-22!42;CL:0000766!8.13e-21!76;CL:0000860!1.30e-19!45;CL:0002031!6.75e-18!124;CL:0002087!2.95e-16!119;CL:0000557!4.41e-16!71;CL:0000839!1.61e-14!70;CL:0002009!4.00e-13!65;CL:0002194!4.38e-12!63;CL:0000576!4.38e-12!63;CL:0000040!4.38e-12!63;CL:0000559!4.38e-12!63;CL:0000094!3.96e-08!8;CL:0002139!1.70e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.26e-18;8!CL:0000097;1.37e-17;5!CL:0000081;2.98e-13;11!CL:0000163;3.82e-13;9!CL:0000860;3.13e-12;33!CL:0002057;3.13e-12;33!CL:0000766;4.74e-11;69!CL:0000775;4.89e-10;3!CL:0000763;1.13e-09;100!CL:0000771;5.02e-08;2!CL:0000473;5.89e-08;39!CL:0000234;5.89e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.77e-25,72;CL:0000763,2.77e-25,108;CL:0000049,2.77e-25,108;CL:0002032,1.55e-21,161;CL:0000837,1.55e-21,161;CL:0000037,1.83e-21,168;CL:0000988,7.49e-20,177;CL:0000738,1.18e-19,136;CL:0000094,6.20e-19,8;CL:0000097,1.34e-17,5;CL:0002028,1.34e-17,5;CL:0000557,1.15e-15,67;CL:0000839,2.92e-14,66;CL:0000081,1.80e-13,11;CL:0000860,1.97e-13,42;CL:0002057,1.97e-13,42;CL:0000163,3.85e-13,9;CL:0000473,2.66e-11,48;CL:0000234,2.66e-11,48;CL:0002031,2.93e-11,120;CL:0000775,2.39e-10,3;CL:0002009,2.93e-09,61;CL:0002194,2.41e-08,59;CL:0000576,2.41e-08,59;CL:0000040,2.41e-08,59;CL:0000559,2.41e-08,59;CL:0000771,5.12e-08,2;CL:0000134,9.84e-08,354;CL:0002087,1.49e-07,115;CL:0002320,2.20e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.02e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.97e-23!112;UBERON:0002390!3.53e-20!102;UBERON:0003061!3.53e-20!102;UBERON:0002371!6.84e-14!80;UBERON:0002405!3.46e-13!115;UBERON:0001474!1.10e-11!86;UBERON:0003081!2.35e-10!216;UBERON:0004765!5.70e-08!101;UBERON:0001434!5.70e-08!101;UBERON:0000178!7.42e-07!15;UBERON:0000179!7.42e-07!15;UBERON:0000463!7.42e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.21e-12;15!UBERON:0000179;7.21e-12;15!UBERON:0000463;7.21e-12;15!UBERON:0001829;3.95e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.98e-21,98;UBERON:0003061,3.98e-21,98;UBERON:0002193,1.84e-18,108;UBERON:0002371,3.39e-13,76;UBERON:0001474,7.42e-12,82;UBERON:0000178,8.08e-12,15;UBERON:0000179,8.08e-12,15;UBERON:0000463,8.08e-12,15;UBERON:0002405,5.78e-11,93;UBERON:0003081,7.75e-11,203;UBERON:0004765,2.36e-10,90;UBERON:0001434,8.02e-09,100;UBERON:0001829,4.56e-07,2;UBERON:0002384,6.55e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.655324116390517,0.527533956456907,0,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0,0.273748850145768,0,0.229240217243854,0.328402357799783,0.629686250509434,1.96682138424452,0.767658796194425,1.08371286321253,0,0.30120591877825,0,0,0.142169232487422,0.880801318004542,2.21598163412751,1.60435557976113,0.434021741431704,0,0,0,0.145398238779565,0.377875943688809,0.970336244751265,0.232429036905685,0.411167888021826,0.619412741790207,0.575384784644301,0.512321413058201,1.41889337933151,6.20542225325913,3.87290810150296,13.5426486594342,0.188242339542605,0.272906150057846,0.898893937780338,4.59125838556354,5.45579346029359,4.47535988059329,0.989553900560148,0.199463657621632,0.426224750532694,0.870627715885752,1.13477044938228,1.24564449799115,0.502497330513487,1.5644487552606,1.73751075764093,0,3.31449872388808,1.89877432464531,0.845021145247767,0.212604299965044,0.838634582033504,0.561643155732475,0.300353785683013,0.16072558669708,0.285012743741249,0.19891667719909,0,0,5.46138611262132,0.889509253863555,2.56038133539904,2.00197993518006,1.14950487990897,1.98313461835459,0.954053754535364,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0.263384084775077,0.196709770113833,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0.111410456885174,0.883817722424512,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,2.43806866313962,0,0,0,0,0,0.795285947051099,0,0.189069634328136,0.221729397462564,0,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0,1.19257444420023,0.860234595106124,0.694281003215189,0,0.419499436209906,0.550236083880135,1.04497483268405,0.516833518338658,0.35576626268671,0.66944122552934,1.20848795132744,0.760272105718513,0.976248230192678,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0.549605231791222,13.1780417436063,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0.721832238805369,0.462985512576611,0.570762456703795,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0.0895585227028483,0,0,9.36060152002293,4.66656700270098,17.2082335898841,21.3297531057103,16.0327890451503,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,1.42636905040718,0,0,0,0,0,0.431255149719035,0.641715181398742,0,0,0,0,0,2.99602809578873,2.99161459204025,1.65766205374414,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0.206768026122887,1.07857100409308,0.426910231213777,0,0,0.604780586659361,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0.451199612907412,0.462092022626489,0,0,0,0,0.510281115829547,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.178064071293475,0.165284915360978,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0.349934720244983,0,0.670302275535787,0,0.0941438007767792,0,0,0.886860307073351,0,2.02979043692868,1.52927441428475,1.70894156152249,2.62054953003568,1.23408681925858,0.648473311192717,2.16012574895246,0.79312517629427,0,0,0,1.85803175125719,0,0.213425530045242,0,0.59873811429845,1.34053759092657,1.2700414963433,0.324621940274555,3.36956613736151,0.228234679033192,0.156679895773023,2.50634477090067,0.846458889008016,0,0,0,0.343505344755765,0,0.223676107892416,0,0,0.278406173895242,0,0.811367035427949,0,1.4098700508785,0.37428108081644,0.146508179271894,0,0,0.284136146806413,0.23874448473769,1.78178808499583,0.307160702099232,0,0.140669416410513,0,0,0,0.398495976502139,0.552567831062295,0,0.102268682502155,0.369254416383208,0,0.269605053441981,0.358042349351218,0.511572370226872,0.0986434056369336,2.3948309234694,0,0,0,0,0.7812832832557,0.524759999977174,0,0,0.762760950878299,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.278847488557207,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0.470940769185074,0.831058409500782,0,0,0,0,0.476809736941136,0.421996129056054,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0.586993856796269,0,0.394584402849391,0,0,0,0.751617097072463,0,0,0,0,0,0,0.138674673013139,1.04135843001079,0.391969589657511,0.609414446062818,0,0.859930162358083,0,0,0,0.193978032976839,0,0.225980740780532,0.822251547880505,0.397429223405979,0.0633107959558787,0,0.0801588202515337,0,0,0.288180834308212,0,0,0,0.372757606696298,0,0,0,0,0,0,0,0,1.28929632425987,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0,0.254019996197353,0,0,0,0,0,0.449947783103001,3.0952078182318,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,2.13440553948281,0,0,0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| |||
|short_description=p1@AK022083 | |||
}} |
Latest revision as of 06:10, 24 July 2015
Short description: | p1@AK022083 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK022083_5end |
Coexpression cluster: | C692_Mast_Eosinophils_Neutrophils_Basophils_immature_CD4_CD19 |
Association with transcript: | 54bp_to_AK022083_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.77e-25 | 72 |
myeloid cell | 2.77e-25 | 108 |
common myeloid progenitor | 2.77e-25 | 108 |
hematopoietic oligopotent progenitor cell | 1.55e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.55e-21 | 161 |
hematopoietic stem cell | 1.83e-21 | 168 |
hematopoietic cell | 7.49e-20 | 177 |
leukocyte | 1.18e-19 | 136 |
granulocyte | 6.20e-19 | 8 |
mast cell | 1.34e-17 | 5 |
basophil mast progenitor cell | 1.34e-17 | 5 |
granulocyte monocyte progenitor cell | 1.15e-15 | 67 |
myeloid lineage restricted progenitor cell | 2.92e-14 | 66 |
blood cell | 1.80e-13 | 11 |
classical monocyte | 1.97e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.97e-13 | 42 |
endocrine cell | 3.85e-13 | 9 |
defensive cell | 2.66e-11 | 48 |
phagocyte | 2.66e-11 | 48 |
hematopoietic lineage restricted progenitor cell | 2.93e-11 | 120 |
neutrophil | 2.39e-10 | 3 |
macrophage dendritic cell progenitor | 2.93e-09 | 61 |
monopoietic cell | 2.41e-08 | 59 |
monocyte | 2.41e-08 | 59 |
monoblast | 2.41e-08 | 59 |
promonocyte | 2.41e-08 | 59 |
eosinophil | 5.12e-08 | 2 |
mesenchymal cell | 9.84e-08 | 354 |
nongranular leukocyte | 1.49e-07 | 115 |
connective tissue cell | 2.20e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.98e-21 | 98 |
blood island | 3.98e-21 | 98 |
hemolymphoid system | 1.84e-18 | 108 |
bone marrow | 3.39e-13 | 76 |
bone element | 7.42e-12 | 82 |
blood | 8.08e-12 | 15 |
haemolymphatic fluid | 8.08e-12 | 15 |
organism substance | 8.08e-12 | 15 |
immune system | 5.78e-11 | 93 |
lateral plate mesoderm | 7.75e-11 | 203 |
skeletal element | 2.36e-10 | 90 |
skeletal system | 8.02e-09 | 100 |
major salivary gland | 4.56e-07 | 2 |
connective tissue | 6.55e-07 | 371 |