FFCP PHASE1:Hg19::chr12:123007386..123007400,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65117 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30559 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-7bp_to_uc001uco.2_5end | |||
|cluster_id=chr12:123007386..123007400,- | |||
|coexpression_cluster_id=C119 | |||
|description=CAGE_peak_13_at_RSRC2_5end | |||
|id=chr12:123007386..123007400,- | |||
|ontology_enrichment_celltype=CL:0002087!3.49e-12!119;CL:0000738!4.28e-11!140;CL:0000037!6.23e-10!172;CL:0000566!6.23e-10!172;CL:0000988!3.76e-09!182;CL:0002031!5.52e-09!124;CL:0002032!7.67e-08!165;CL:0000837!7.67e-08!165;CL:0000542!1.46e-07!53;CL:0000051!1.46e-07!53;CL:0000838!3.02e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000623;3.91e-26;3!CL:0000624;1.02e-22;6!CL:0000791;3.02e-22;18!CL:0000789;3.02e-22;18!CL:0002419;3.02e-22;18!CL:0000084;1.70e-20;25!CL:0000542;3.57e-19;53!CL:0000226;6.58e-12;3!CL:0000842;6.58e-12;3!CL:0002087;6.16e-11;104!CL:0000236;1.91e-10;13!CL:0000785;1.48e-09;1!CL:0000819;1.48e-09;1!CL:0000625;1.67e-07;11!CL:0000988;3.19e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.45e-33,52;CL:0000542,6.97e-33,53;CL:0000051,6.97e-33,53;CL:0000623,3.76e-26,3;CL:0000825,3.76e-26,3;CL:0002087,1.87e-25,115;CL:0000738,1.89e-23,136;CL:0000624,7.13e-23,6;CL:0000791,3.08e-22,18;CL:0000789,3.08e-22,18;CL:0002420,3.08e-22,18;CL:0002419,3.08e-22,18;CL:0000790,3.08e-22,18;CL:0000037,2.00e-20,168;CL:0000084,2.03e-20,25;CL:0000827,2.03e-20,25;CL:0002031,2.54e-19,120;CL:0000988,3.23e-19,177;CL:0002032,2.49e-17,161;CL:0000837,2.49e-17,161;CL:0000226,9.18e-12,3;CL:0000842,9.18e-12,3;CL:0000236,9.90e-10,14;CL:0000819,1.91e-09,1;CL:0000134,7.98e-08,354;CL:0002320,1.34e-07,361;CL:0000625,1.95e-07,11;CL:0000219,8.27e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000790;3.02e-22;18!CL:0000051;3.57e-19;53 | |||
|ontology_enrichment_disease=DOID:162!1.11e-07!235;DOID:14566!2.09e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:0060073;1.48e-09;1!DOID:8675;1.48e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.91e-09,1;DOID:8675,1.91e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.71e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410623275218653,0,0.152826811495903,0.164201178899891,0,0,0.383829398097213,0,0,0,0,0,0.284338464974843,0.293600439334847,0.553995408531877,2.20598892217156,1.08505435357926,0,0,0,0.581592955118259,0.377875943688809,0,0.464858073811369,0,0,0,0,0.47296445977717,0.689491361473237,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0.398927315243264,0,2.61188314765726,0,0,0.502497330513487,0.521482918420201,0,0,0,0.316462387440884,0.211255286311942,0.212604299965044,0,0.112328631146495,0.150176892841506,0.16072558669708,0.570025487482497,0,0.365328307529268,0,0.546138611262131,0.889509253863555,1.28019066769952,0,0,0,0,3.41527781465669,1.76171156811282,0,0,0,0.263384084775077,1.57367816091066,4.71612915298998,3.49522548299166,0,1.30368906653436,0.473447805734733,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0.25618263945135,0.130059347559878,0,0.276350017785848,0,0.444859689486181,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,1.00803371612366,6.15112450302067,2.60683926989038,0,0,0,0,0,0.289693037921647,0.795285947051099,0,0.0945348171640679,0,0,0,0,0,0.324547393654683,0.174129737299267,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0.358779271377724,0.213557388818567,0.423863802319124,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0.414656231081544,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0,0.112085143993527,1.37921532141349,3.23441362289276,4.2353201972317,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0.415941723061614,0.535286966391485,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,1.2942852049117,1.06727557803444,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0.0920809889358963,0,0.182091168006717,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.27470839445503,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0.170453254832202,0,0,0,0.127612712494584,0.10115778085555,0,0.94443704049192,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.490080431962063,0.185803175125719,0.144269212976445,0.0711418433484141,0,0,0.191505370132367,0,0.649243880549111,1.40398589056729,0.228234679033192,0,0,0.169291777801603,0.321176150207399,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0.520855522170466,0.0874599999961957,0,0,0,0,0,0.291604613383254,0.173624994933292,0,0,1.52581736317083,0.110579259931225,0,0,0,0.139423744278603,0,0.113942055847001,0,0.0897576444097721,0.108647371922008,0,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0.313265848516366,0,0,0,1.27718352450966,0.19566461893209,0.242780379534093,0,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0.416024019039416,0.173559738335131,0,0,0.17472666824203,0.343972064943233,0.0967563312890851,0,0.0821154570532092,0,0,0,0.137041924646751,0.19871461170299,0,0.195551382734803,0,0,0.39961921916426,0.288180834308212,0,0.343189995723929,0.14405479798815,0.372757606696298,0,0.543616824294456,0.104602846312333,0,0.288950589901519,0,0,0,0.429765441419957,1.05154941711726,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0.393709926058995,0.254019996197353,0,0,0.321506296930038,0.137539436597234,0.83088067605837,0,0,0,0,0,0,0,0.537862017998534,0,0,0,0.25426853765475,0,0,0,0,0.246277562248017,0.340776043570843,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0.691743174681154,0,0.303298235083296,0,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0.132864840313363,0,0,0.737318726261158,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0.637724760305049,0.371807292777007,0,0.318004350653419,0.315446980005013,0,0,0,0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| |||
|short_description=p13@RSRC2 | |||
}} |
Latest revision as of 00:16, 17 September 2015
Short description: | p13@RSRC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RSRC2_5end |
Coexpression cluster: | C119_CD4_CD8_Natural_Neutrophils_CD14_Peripheral_CD19 |
Association with transcript: | -7bp_to_uc001uco.2_5end |
EntrezGene: | RSRC2 |
HGNC: | 30559 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.45e-33 | 52 |
lymphocyte | 6.97e-33 | 53 |
common lymphoid progenitor | 6.97e-33 | 53 |
natural killer cell | 3.76e-26 | 3 |
pro-NK cell | 3.76e-26 | 3 |
nongranular leukocyte | 1.87e-25 | 115 |
leukocyte | 1.89e-23 | 136 |
CD4-positive, alpha-beta T cell | 7.13e-23 | 6 |
mature alpha-beta T cell | 3.08e-22 | 18 |
alpha-beta T cell | 3.08e-22 | 18 |
immature T cell | 3.08e-22 | 18 |
mature T cell | 3.08e-22 | 18 |
immature alpha-beta T cell | 3.08e-22 | 18 |
hematopoietic stem cell | 2.00e-20 | 168 |
T cell | 2.03e-20 | 25 |
pro-T cell | 2.03e-20 | 25 |
hematopoietic lineage restricted progenitor cell | 2.54e-19 | 120 |
hematopoietic cell | 3.23e-19 | 177 |
hematopoietic oligopotent progenitor cell | 2.49e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.49e-17 | 161 |
single nucleate cell | 9.18e-12 | 3 |
mononuclear cell | 9.18e-12 | 3 |
B cell | 9.90e-10 | 14 |
B-1 B cell | 1.91e-09 | 1 |
mesenchymal cell | 7.98e-08 | 354 |
connective tissue cell | 1.34e-07 | 361 |
CD8-positive, alpha-beta T cell | 1.95e-07 | 11 |
motile cell | 8.27e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.71e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.91e-09 | 1 |
lymphosarcoma | 1.91e-09 | 1 |