FFCP PHASE1:Hg19::chr12:11802600..11802685,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2120 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3495 | |||
|TSSclassifier=strong | |||
|UniProt=P41212 | |||
|association_with_transcript=-102bp_to_ENST00000396373,NM_001987,uc001qzz.2_5end | |||
|cluster_id=chr12:11802600..11802685,+ | |||
|description=CAGE_peak_1_at_ETV6_5end | |||
|id=chr12:11802600..11802685,+ | |||
|ontology_enrichment_celltype=CL:0000763!4.14e-29!112;CL:0000049!4.14e-29!112;CL:0000766!2.21e-25!76;CL:0002057!2.36e-24!42;CL:0000037!1.43e-23!172;CL:0000566!1.43e-23!172;CL:0000557!2.28e-23!71;CL:0002032!1.23e-22!165;CL:0000837!1.23e-22!165;CL:0000860!9.90e-22!45;CL:0002009!1.98e-20!65;CL:0000839!1.98e-19!70;CL:0002194!2.83e-19!63;CL:0000576!2.83e-19!63;CL:0000040!2.83e-19!63;CL:0000559!2.83e-19!63;CL:0000988!5.49e-19!182;CL:0000738!1.62e-18!140;CL:0002031!1.61e-14!124;CL:0002087!1.19e-13!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.49e-19;33!CL:0002057;2.49e-19;33!CL:0000473;3.26e-16;39!CL:0000234;3.26e-16;39!CL:0000576;3.28e-15;48!CL:0000766;9.11e-14;69!CL:0000763;7.74e-12;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.42e-30,108;CL:0000049,2.42e-30,108;CL:0000766,5.66e-27,72;CL:0000557,6.06e-25,67;CL:0000473,2.22e-24,48;CL:0000234,2.22e-24,48;CL:0000860,2.36e-24,42;CL:0002057,2.36e-24,42;CL:0000037,3.05e-24,168;CL:0002032,2.59e-23,161;CL:0000837,2.59e-23,161;CL:0002009,6.07e-22,61;CL:0000839,8.95e-21,66;CL:0002194,9.41e-21,59;CL:0000576,9.41e-21,59;CL:0000040,9.41e-21,59;CL:0000559,9.41e-21,59;CL:0000988,9.96e-20,177;CL:0000738,3.50e-19,136;CL:0002031,4.02e-15,120;CL:0002087,3.04e-14,115 | |||
|ontology_enrichment_development_v019=CL:0002057;7.95e-18;42!CL:0000049;1.74e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.39e-21!102;UBERON:0003061!5.39e-21!102;UBERON:0002193!7.43e-21!112;UBERON:0002371!3.99e-20!80;UBERON:0001474!5.87e-17!86;UBERON:0002405!9.31e-17!115;UBERON:0004765!1.98e-13!101;UBERON:0001434!1.98e-13!101;UBERON:0003081!6.03e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,1.58e-22,93;UBERON:0002390,5.31e-22,98;UBERON:0003061,5.31e-22,98;UBERON:0002193,9.04e-22,108;UBERON:0002371,2.40e-21,76;UBERON:0001474,6.23e-18,82;UBERON:0004765,7.07e-15,90;UBERON:0001434,7.99e-13,100;UBERON:0003081,7.65e-11,203 | |||
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| |||
|short_description=p1@ETV6 | |||
}} |
Latest revision as of 16:35, 16 September 2015
Short description: | p1@ETV6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ETV6_5end |
Coexpression cluster: | NA |
Association with transcript: | -102bp_to_ENST00000396373, NM_001987, uc001qzz.2_5end |
EntrezGene: | ETV6 |
HGNC: | 3495 |
UniProt: | P41212 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.42e-30 | 108 |
common myeloid progenitor | 2.42e-30 | 108 |
myeloid leukocyte | 5.66e-27 | 72 |
granulocyte monocyte progenitor cell | 6.06e-25 | 67 |
defensive cell | 2.22e-24 | 48 |
phagocyte | 2.22e-24 | 48 |
classical monocyte | 2.36e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.36e-24 | 42 |
hematopoietic stem cell | 3.05e-24 | 168 |
hematopoietic oligopotent progenitor cell | 2.59e-23 | 161 |
hematopoietic multipotent progenitor cell | 2.59e-23 | 161 |
macrophage dendritic cell progenitor | 6.07e-22 | 61 |
myeloid lineage restricted progenitor cell | 8.95e-21 | 66 |
monopoietic cell | 9.41e-21 | 59 |
monocyte | 9.41e-21 | 59 |
monoblast | 9.41e-21 | 59 |
promonocyte | 9.41e-21 | 59 |
hematopoietic cell | 9.96e-20 | 177 |
leukocyte | 3.50e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 4.02e-15 | 120 |
nongranular leukocyte | 3.04e-14 | 115 |
Ontology term | p-value | n |
---|---|---|
immune system | 1.58e-22 | 93 |
hematopoietic system | 5.31e-22 | 98 |
blood island | 5.31e-22 | 98 |
hemolymphoid system | 9.04e-22 | 108 |
bone marrow | 2.40e-21 | 76 |
bone element | 6.23e-18 | 82 |
skeletal element | 7.07e-15 | 90 |
skeletal system | 7.99e-13 | 100 |
lateral plate mesoderm | 7.65e-11 | 203 |