FFCP PHASE1:Hg19::chr12:116715460..116715476,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23389 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22962 | |||
|TSSclassifier=strong | |||
|UniProt=Q71F56 | |||
|association_with_transcript=-317bp_to_ENST00000281928_5end | |||
|cluster_id=chr12:116715460..116715476,- | |||
|coexpression_cluster_id=C3073 | |||
|description=CAGE_peak_4_at_MED13L_5end | |||
|id=chr12:116715460..116715476,- | |||
|ontology_enrichment_celltype=CL:0002057!1.23e-15!42;CL:0000860!5.78e-13!45;CL:0000766!1.78e-10!76;CL:0000763!4.15e-10!112;CL:0000049!4.15e-10!112;CL:0002009!1.86e-09!65;CL:0002194!1.05e-08!63;CL:0000576!1.05e-08!63;CL:0000040!1.05e-08!63;CL:0000559!1.05e-08!63;CL:0000557!2.99e-08!71;CL:0000839!1.33e-07!70;CL:0000738!1.62e-07!140;CL:0000037!7.09e-07!172;CL:0000566!7.09e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.10e-11;33!CL:0002057;3.10e-11;33!CL:0000576;1.66e-09;48!CL:0000473;2.39e-07;39!CL:0000234;2.39e-07;39!CL:0000094;3.25e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.90e-16,42;CL:0002057,1.90e-16,42;CL:0000766,4.27e-13,72;CL:0000473,6.99e-13,48;CL:0000234,6.99e-13,48;CL:0002009,5.82e-12,61;CL:0000763,6.55e-12,108;CL:0000049,6.55e-12,108;CL:0002194,4.42e-11,59;CL:0000576,4.42e-11,59;CL:0000040,4.42e-11,59;CL:0000559,4.42e-11,59;CL:0000557,1.80e-10,67;CL:0000839,1.09e-09,66;CL:0000738,1.22e-09,136;CL:0000037,2.37e-08,168;CL:0002032,2.81e-07,161;CL:0000837,2.81e-07,161;CL:0000988,5.40e-07,177;CL:0000094,6.21e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.06e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.08e-14!115;UBERON:0002390!3.11e-09!102;UBERON:0003061!3.11e-09!102;UBERON:0002193!3.90e-08!112;UBERON:0002371!2.54e-07!80;UBERON:0001474!7.02e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.03e-14,114;UBERON:0002390,3.54e-11,98;UBERON:0003061,3.54e-11,98;UBERON:0002193,1.94e-09,108;UBERON:0002371,5.99e-09,76;UBERON:0001474,3.02e-08,82;UBERON:0002405,7.50e-08,93;UBERON:0001434,3.98e-07,100;UBERON:0004765,5.43e-07,90 | |||
|phase1_expression=0.726713517082227,1.2846031433459,0.986680828671798,1.0007329835313,1.78784437770915,0.872338524100369,0,0.631719873426831,1.56711376919903,0.737201809504527,0.697801167972428,1.52908960491121,1.05506791291381,0.866364470720326,1.98838425436749,0,0,1.46062018077475,0.487932798790507,0.738726348460727,0.816002764977012,1.56727360739044,1.14494394852423,1.09499540058307,2.51085279189606,0.0764134057479513,0.246301768349837,0.0787107813136792,4.32700704533794,3.0706351847777,5.41856431606266,0,0.30120591877825,0.739508020333575,0.154934401160603,1.13735385989937,0.880801318004542,11.0799081706375,9.22504458362652,8.02940221648652,2.68698569087909,1.29557466407592,1.28787783817093,3.34415949192999,3.02300754951048,2.91100873425379,1.39457422143411,4.52284676824008,5.26500830521676,1.7261543539329,2.81776777182011,4.49316236788312,1.72372840368309,3.87290810150296,4.06279459783025,1.31769637679823,2.45615535052061,3.59557575112135,1.83650335422542,1.92557416245656,6.39337125799041,2.30895910130701,2.39356389145958,5.11469700639233,5.5139755339431,5.6738522469114,4.9825779919646,2.51248665256743,3.12889751052121,3.47502151528187,1.81619850790011,4.41933163185078,2.53169909952708,0.845021145247767,2.12604299965044,2.51590374610051,1.79725809834392,2.85336096398862,3.05378614724452,3.13514018115373,2.78483348078726,2.92262646023414,0,1.63841583378639,1.77901850772711,0.426730222566507,0.800791974072025,1.14950487990897,0.661044872784862,0,1.1384259382189,2.34894875748376,0.764546456250458,2.64342657158052,5.60508562981536,0.526768169550154,3.540775862049,3.93010762749165,0.822405995998037,1.33749196312542,0.651844533267181,1.4203434172042,0,0.334231370655521,1.17842362989935,0.443067789167242,0.541607727530031,0,1.04047478047903,1.15106533222573,0,0.579606171470105,0.593146252648242,1.87278579662799,1.04535523804977,0.906474741580529,1.53288197440768,2.74901956386104,2.02415753615602,1.27426165729639,0,1.90090408889675,1.35517607169996,1.66382594500744,1.24930726552346,2.13099526839615,2.46338399076314,2.21767417547206,1.60464117470104,2.17236605824198,2.43806866313962,0,0.255725123687061,1.44575660953827,3.50936537445123,1.15877215168659,0,1.94653948121054,1.70162670895322,0.443458794925128,1.75669571386252,2.35762335895883,1.09288586487763,0.741568885568859,0.324547393654683,1.39303789839414,0.797747763113191,3.57735936458013,3.43196946468077,4.08603251462521,0.596287222100115,0,1.04142150482278,0.56530794192401,2.09749718104953,1.10047216776027,0.417989933073621,0.775250277507987,0.71153252537342,1.33888245105868,0.402829317109147,0,0.976248230192678,0.735326160691737,1.62028389576352,1.07159673940896,0.44905874525234,1.57656072676651,1.53316637465883,0,0.732806975721629,18.4492584410489,31.022421131866,1.74437620857014,1.49091585508596,1.13967460498122,1.85372853138506,3.72887606973458,1.77334191099179,1.12135520028461,0,0.49333509683432,3.11211035399766,0.269421344139376,1.30769522490767,3.63257826347835,1.15235184896,0.937285727335186,0.936480230490962,0,0.298897361103602,1.17434498643765,1.78060238804945,1.40450806702248,2.04154171254893,1.84251475967652,1.13658359293342,0,1.48360157567134,0.910161361938026,1.43723628363248,1.34668891163253,1.12606667884768,1.6623846929051,3.5118209670467,0.919463387397059,2.40380894250555,0.340296549480063,4.84352016359927,3.41691822109708,1.27159140695737,2.40072876867522,2.67936576019941,4.3798891807757,1.8611685633159,4.72573730275545,1.65642908774038,3.78650661366172,2.39329736469978,1.61646056818812,1.42003837006646,2.31729825923573,1.18692414617341,0.57978255948989,1.09098448236334,1.14721838155602,0.731842236777572,1.59035721985782,0.464775771478074,1.24393266018445,0.504641701751257,0.72995471815166,0,2.57296375277154,1.38134921352481,2.3218396401599,0.721879481669586,0.118306800039844,0.505754070234305,0.241011029883482,0.110293972732394,0.217879444092406,0.474541238222193,0.134831308160164,0.392442930250692,0,0,0,0.8231480226628,1.47008711385542,2.53510069643662,0.982827216677626,6.49868897349544,2.6487785964879,2.33678033231916,1.20097467208968,1.09750285408626,0,0.804231779293047,0.925884451585296,1.3032332212413,0,2.88662684050547,0.695582429850461,1.40890433082986,0.721832238805369,0.462985512576611,0.190254152234598,2.37061319387782,1.71697232418975,1.47730203652438,0.234004265139238,1.18904929830983,0,0.671928512795438,0.425325291727159,0.985143749731331,0.581267877027924,1.53353071666084,0,0.44024217006613,1.03664057770386,1.00883967391873,0.75745460055828,0.825472625798197,0,1.17217447210047,3.4214489204541,0.308482478109971,0,0.857479297891735,1.45770409648969,1.74384027533312,0.51336800074665,1.16344544182,3.57656445851882,0,1.86156681609409,1.04007436911366,0.257207374262142,1.41849132023278,1.0656887160644,0.857867961948885,0.542621605391443,0.823240336780769,0.977208552881205,0.710783897485092,2.37585561880029,0.301439377059586,0,0.499864955910285,0,0.502257091432126,0,0.958499421966331,2.29723871668228,0,2.02693829334611,1.02738161275192,1.79060963239896,0.224170287987055,2.36436912242313,1.72502059887614,2.31017465303547,0.76228387266739,1.30139853857622,1.54657762555539,1.17261385734044,0.637938751653163,12.7331194071021,8.97484377612075,14.0901274568252,2.57652132610194,0.500170521059677,1.35632511849868,0,0.356857977594324,0.946214490203608,0.702848489956279,3.31040709700491,2.27407504055985,1.03473071292505,0.664225598535437,2.39679919104214,1.82455590382974,0.587403472388222,1.71571711905428,2.06768026122887,2.5885704098234,2.13455115606889,0.909382714338778,0,0.907170879989041,0.248107807818777,1.99500565274481,0.841980283299221,0.512556597022804,1.02341449813341,0.965123526861645,1.48418066444991,0.771048469013278,0.532685175939381,0.98552587216571,0,0.581051892299796,2.41718899183244,0.40101294060657,1.19705285616665,0.803701137152247,0.546273504020151,0.393373244878272,1.80479845162965,0.462092022626489,0,1.46139224653261,1.05551628892876,0,0.170093705276516,0.431831832204279,0,0,0.501689773854853,0.254876273045038,1.66215201785745,0.447749509444357,3.50815802633495,1.8300481571743,0.256450125116389,0.656029291399411,0.650756789328606,3.29731237272711,0.915694648183434,0.495056999523528,1.14853107599234,1.30012049207304,0,1.35339005608971,2.00263202249038,1.84204409671355,1.7918754422989,3.11518710117994,2.75531718437034,1.70453254832202,1.51354460599453,0.661139661443912,0.192190067365106,3.31793052485919,1.51736671283325,0,1.25924938732256,0.6970372701606,0.924100740528266,0,0,1.29726953372744,0.286249773483982,2.232950216158,0.949138274156178,1.14378116354295,1.02359116524534,3.42351190427136,1.27281299170375,0,1.2591072030832,1.64722217841633,1.17812402345686,0.404364963146632,0,0.842516912477962,0.48763373908959,0.974853958525138,0,0.682499557039929,0.141405431953713,0,0.551365343546124,1.32687795048244,0.438450885253763,1.73632660280006,0.655894752046633,0,0.30982349809975,0.563391205064483,0.717056761020258,1.17898849215745,1.07001315444375,0,0.422215270595328,1.31717957183961,1.13841952129715,0.349934720244983,0,1.34060455107157,0,3.20088922641049,0.86101074534246,0,0,0.229723400206959,3.04468565539302,6.117097657139,1.70894156152249,2.1440859791201,2.05681136543097,5.18778648954174,5.94034580961926,5.55187623405989,1.28188885352968,1.92495971052672,0,0.371606350251437,0.28853842595289,1.06712765022621,0.797131363644112,0,3.06408592211787,1.2700414963433,0.324621940274555,1.12318871245384,2.51058146936511,0.94007937463814,2.50634477090067,0.50787533340481,1.1241165257259,1.41259795033733,1.27753871307098,1.03051603426729,0.307240764308458,2.01308497103174,1.50164227540718,0.781552381608161,0,0,0.270455678475983,0.66614393599564,4.22961015263549,1.68426486367398,2.05111450980652,0.970884173996107,1.33732061132974,1.42068073403207,4.29740072527842,1.48482340416319,2.15012491469462,0,1.82870241333667,1.22439575525196,1.97764649072111,0.422250816255987,2.98871982376605,3.31540698637377,0.503865495708552,0.613612095012929,0,0.622079175323615,0.898683511473268,2.86433879480975,3.06943422136123,2.07151151837561,0,1.11136990144637,0.969332746095218,0.649376687132959,7.98455192004777,3.64598865519327,0.349839999984783,3.62499787717397,1.2517279311405,0.254253650292766,0.236387681767936,0,1.74962768029953,0.694499979733169,1.77148277162768,1.5677537021303,4.5774520895125,9.95213339381022,3.54657142744257,1.09692698576986,0.544692317594951,1.53366118706464,4.61701551022782,1.02547850262301,1.61394733071642,0.359030577639089,1.3037684630641,4.46601623624687,2.01514705484097,2.13213910407454,0,1.09886179476517,0.997270091400938,1.35357396370308,0.980312671588698,1.34257269580674,0.75901493089674,2.86085842164682,0.210998064528027,0.816164040795739,1.13082457147153,0.865554558968364,2.98578579323551,1.76915129006678,1.83309043480088,0.889563386041866,0.123563938946503,0.522109747527277,1.28062152663286,2.40773294189637,0.937057782901357,0.729819156862664,0.978323094660449,0.485560759068186,1.57833761139756,3.62972148145992,3.67287313956588,2.27471686662557,2.25485129121739,0.414752765588989,3.32326936353593,1.323967823502,2.19753042885058,2.38944859545918,0.853828638089378,0.416024019039416,0.694238953340524,0.979923974143776,0.609414446062818,0.698906672968121,0.859930162358083,0.290268993867255,0.438535902517113,0.328461828212837,2.71569246167574,3.08896443420251,1.58186518546373,1.37041924646751,0.794858446811959,2.40581024632339,1.36885967914362,0.240476460754601,3.20179492109029,1.19885765749278,0.72045208577053,1.25990255782507,1.20116498503375,0,3.10631338913581,2.35694034616795,1.49494626680975,0.523014231561666,0.203996435272644,1.15580235960608,2.40168115483916,1.9166753044879,11.4971929260275,0.429765441419957,2.62887354279315,2.23425921017803,2.97908551215189,2.87149209830726,0.599037001496973,0,1.78537165953498,3.29199015184959,1.80149941771202,1.16495949527454,0.551482276150566,0.412079291905832,0.471824806979294,0.393709926058995,0.254019996197353,2.38568906942791,1.77064427945048,0.482259445395058,0.550157746388935,0.415440338029185,2.92466059016951,4.6428117273477,2.55148137963704,0.670869375198532,1.49730843868477,2.8850023474249,2.32320740342694,0.179287339332845,1.53532157855556,0,0.662091970365432,1.77987976358325,0,0,0,1.19730191562487,1.8881279772348,2.3854323049959,0.79318464064088,1.17241786942466,0,0.387848869084652,1.71902382265497,2.22412889249628,0.704815022316672,2.45611048905698,5.50215067848831,3.31391244277756,1.9846640872478,0.395223263795889,0.852548188666271,1.91502377331055,2.72008901684737,3.0082787282724,3.982492497925,3.93447156851765,2.82697373250422,1.77213635993397,0.976210119215705,2.50381861413,0.573409195690071,2.77322628842131,2.42175971471395,1.66018361923477,0.874862855734746,1.81978941049977,0.285465333544967,0.470531639396343,0.468334905806882,2.3187364577732,0.74627401443437,2.10341978862502,1.10961172300523,2.08343305802598,1.76097531226803,0.889811221596536,1.83072054717539,2.7221566277383,0.621748802331122,0.73927574994817,1.11507737014592,1.79921244865442,0.465788870628778,1.24411862352257,1.06336685823198,0.521745061811734,1.6528336989694,0,0.406870733204662,1.45478927362048,0.537052785212442,1.39210127963548,0.398095888698616,2.00013882331577,0.686791410365586,1.34699795506368,2.52369796457302,0.963099152036517,1.71553273099941,0,0.906823702049089,0.463044948647668,0.97894681802587,0.71635536432595,0.617602894321944,0.657852148736121,0.883445729729405,0.578742114812744,0.506827321959218,0.512483037175893,0,1.82315973706429,3.31820246764154,2.14346339723327,3.85308036908753,3.10774249086104,1.63804924423206,0.245772908753719,0.422624246717254,1.39991177098451,1.17360902663555,1.03328987796489,1.13503190713367,1.10463570151104,0.279759015438889,1.24415452006595,1.02315497042921,0.754773679776773,1.88719130227076,1.20130602011215,0.33946505990805,0.425149840203366,2.10690799240304,2.23457967189298,1.59002175326709,2.05040537003259,1.60114149657094,0.352675943690684,0.3062454773532,2.18379365327962,1.41696576325585,2.55414174491442,1.23069818544453,2.26864526599546,1.86724581653388,1.45328081068666,0,2.15924980702256,0.353909170043221,0.550285795565037,2.07946199070609,1.52552838186867,2.0710797781803,1.19349733269765,2.78278214892252,1.41193548092464,2.34454203369928,0.523813388962845,0.327543835020193,0.591424344868181,2.22874029240702,0.781078098613847,2.06686796501184,2.40980078736846,6.01672289920042,0.548257766857182,2.97726707033577,1.05522746615772,0.766574565837572,0.535701835878287,4.70797211106354,1.21393120847326,3.64259506162076,2.83847584520444,0.921871900446234,1.20041606606193,1.56330385846713,1.64431933907123,0.472775363535873,0.556157009460346,3.68917536397416,1.72827148907602,1.12108865325516,2.73947616152849,0.431855182437243,0,2.43020250200632,0.47404083519818,1.16241425368125,0.521574816907738,0.801711364730253,1.65772931330429,1.87790324803345,2.76503864725637,2.58136415292167,1.18332000730565,0.937347452350735,2.9637093513365,0.4582137370881,0,0.955538938977433,1.34226518157351,0.490751168076215,0.487671699929078,0.647428837187895,2.36124455769368,1.1598144313382,0.971421986118279,1.16969731731053,0.397901550322736,1.07028081699812,1.24240690242856,0.439762066981716,1.96251696636676,2.77826969188601,1.31135736302374,0,4.4126697915703,0.471353094203252,0.785233868459781,3.86160320425212,1.6906229103336,1.69927114687817,1.87967835959707,3.22289439867886,0.599646935549574,1.78553938605658,0.352894871715692,0.561689566824178,0,1.37618785021362,2.15009374727177,2.20880187070458,1.76777874496378,6.10890966476528,3.7031878836078,1.11598505450025,1.84870251452567,0.432626562123789,2.90182777120682,0.655593431782173,2.02717601618299,1.63182127587171,2.13773924212448,4.22716537860287,0.50141507858475,2.42491834298366,1.07185652062471,0.829169439458779,1.65492793379032,1.70587185520785,2.3806443146374,4.52122368852043,6.02124728669822,0.897054900644907,2.80047496423926,2.22328907854041,2.39488422686657,1.02669990325584,2.96349033264185,2.7254438049217,2.66128285236811,0.651226148887796,1.28072815053259,1.9307228228694,0.898252021065869,0,6.35655509750906,4.47585796147312,5.99181096766961,2.61655931668334,0 | |||
|short_description=p4@MED13L | |||
}} |
Latest revision as of 15:24, 16 September 2015
Short description: | p4@MED13L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MED13L_5end |
Coexpression cluster: | C3073_Eosinophils_Neutrophils_granulocyte_cerebellum_CD14_parietal_vagina |
Association with transcript: | -317bp_to_ENST00000281928_5end |
EntrezGene: | MED13L |
HGNC: | 22962 |
UniProt: | Q71F56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.90e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.90e-16 | 42 |
myeloid leukocyte | 4.27e-13 | 72 |
defensive cell | 6.99e-13 | 48 |
phagocyte | 6.99e-13 | 48 |
macrophage dendritic cell progenitor | 5.82e-12 | 61 |
myeloid cell | 6.55e-12 | 108 |
common myeloid progenitor | 6.55e-12 | 108 |
monopoietic cell | 4.42e-11 | 59 |
monocyte | 4.42e-11 | 59 |
monoblast | 4.42e-11 | 59 |
promonocyte | 4.42e-11 | 59 |
granulocyte monocyte progenitor cell | 1.80e-10 | 67 |
myeloid lineage restricted progenitor cell | 1.09e-09 | 66 |
leukocyte | 1.22e-09 | 136 |
hematopoietic stem cell | 2.37e-08 | 168 |
hematopoietic oligopotent progenitor cell | 2.81e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.81e-07 | 161 |
hematopoietic cell | 5.40e-07 | 177 |
granulocyte | 6.21e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.03e-14 | 114 |
hematopoietic system | 3.54e-11 | 98 |
blood island | 3.54e-11 | 98 |
hemolymphoid system | 1.94e-09 | 108 |
bone marrow | 5.99e-09 | 76 |
bone element | 3.02e-08 | 82 |
immune system | 7.50e-08 | 93 |
skeletal system | 3.98e-07 | 100 |
skeletal element | 5.43e-07 | 90 |