FFCP PHASE1:Hg19::chr8:13133974..13133985,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:13133974..13133985,-
|short_description=p13@DLC1
|description=CAGE_peak_13_at_DLC1_5end
|association_with_transcript=69bp_to_ENST00000512044_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10395 | |EntrezGene=10395 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2897 | |HGNC=2897 | ||
|TSSclassifier=strong | |||
|UniProt=E9PDZ8 | |UniProt=E9PDZ8 | ||
|association_with_transcript=69bp_to_ENST00000512044_5end | |||
|cluster_id=chr8:13133974..13133985,- | |||
|coexpression_cluster_id=C2918 | |||
|description=CAGE_peak_13_at_DLC1_5end | |||
|id=chr8:13133974..13133985,- | |||
|ontology_enrichment_celltype=CL:0000055!4.45e-20!180;CL:0000057!4.06e-19!75;CL:0002139!6.10e-14!24;CL:0000222!2.03e-13!119;CL:0000071!1.56e-11!18;CL:0002546!1.56e-11!18;CL:0000115!3.45e-10!35;CL:0002620!2.35e-09!23;CL:0002078!6.03e-08!44;CL:0000213!1.11e-07!57;CL:0000215!1.11e-07!57;CL:1000413!1.56e-07!9;CL:0002371!2.08e-07!591;CL:0002334!3.25e-07!12;CL:0000680!7.53e-07!57;CL:0000056!7.53e-07!57;CL:0000355!7.53e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.54e-16;24!CL:0000071;2.25e-13;18!CL:0000115;1.21e-12;36!CL:1000413;3.32e-11;9!CL:0002620;9.93e-09;23!CL:0002078;7.13e-08;45!CL:0002544;2.70e-07;6!CL:0002334;3.04e-07;12!CL:0000057;4.15e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.16e-16,24;CL:0000115,1.71e-14,36;CL:0000057,2.48e-14,76;CL:0000071,8.94e-14,18;CL:0002546,8.94e-14,18;CL:1000413,1.01e-11,9;CL:0000222,5.49e-11,121;CL:0000213,9.66e-11,58;CL:0000215,9.66e-11,58;CL:0002078,2.26e-10,45;CL:0002620,8.91e-09,23;CL:0000048,1.43e-07,427;CL:0002544,1.84e-07,6;CL:0000723,3.52e-07,433;CL:0002334,3.53e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;2.25e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.41e-19!79;UBERON:0007798!1.41e-19!79;UBERON:0000055!5.31e-16!69;UBERON:0004535!5.60e-15!110;UBERON:0004872!3.96e-14!84;UBERON:0001009!7.31e-14!113;UBERON:0000477!9.32e-14!286;UBERON:0001981!1.72e-13!60;UBERON:0007500!1.72e-13!60;UBERON:0004537!1.72e-13!60;UBERON:0006965!1.72e-13!60;UBERON:0003914!2.46e-13!118;UBERON:0004111!1.50e-12!241;UBERON:0000119!9.06e-12!312;UBERON:0001986!1.56e-11!18;UBERON:0004638!1.56e-11!18;UBERON:0004852!1.56e-11!18;UBERON:0000483!8.14e-11!309;UBERON:0001637!9.03e-11!42;UBERON:0003509!9.03e-11!42;UBERON:0004572!9.03e-11!42;UBERON:0000475!1.29e-10!365;UBERON:0000025!2.09e-10!194;UBERON:0000487!2.60e-10!22;UBERON:0006914!5.06e-10!25;UBERON:0000490!1.35e-09!138;UBERON:0000914!1.09e-08!83;UBERON:0002329!1.09e-08!83;UBERON:0003077!1.09e-08!83;UBERON:0003059!1.09e-08!83;UBERON:0007282!1.09e-08!83;UBERON:0009618!1.09e-08!83;UBERON:0007285!1.09e-08!83;UBERON:0005256!2.18e-08!143;UBERON:0004290!2.48e-08!70;UBERON:0000947!4.94e-08!21;UBERON:0010191!4.94e-08!21;UBERON:0004573!5.00e-08!33;UBERON:0004571!5.00e-08!33;UBERON:0003915!1.56e-07!9;UBERON:0004700!1.56e-07!9;UBERON:0001917!1.56e-07!9;UBERON:0000468!2.79e-07!659;UBERON:0000486!4.97e-07!82;UBERON:0002199!9.00e-07!45;UBERON:0002416!9.00e-07!45;UBERON:0002100!9.34e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.25e-13;18!UBERON:0001986;2.25e-13;18!UBERON:0004852;2.25e-13;18!UBERON:0000487;6.90e-12;22!UBERON:0003915;3.32e-11;9!UBERON:0004700;3.32e-11;9!UBERON:0001917;3.32e-11;9!UBERON:0006914;5.48e-10;25!UBERON:0000490;1.76e-08;33!UBERON:0001637;6.74e-08;42!UBERON:0003509;6.74e-08;42!UBERON:0004572;6.74e-08;42!UBERON:0007500;1.39e-07;56!UBERON:0001981;1.39e-07;56!UBERON:0004537;1.39e-07;56!UBERON:0000055;3.02e-07;65!UBERON:0002049;3.03e-07;75!UBERON:0007798;3.03e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.94e-14,18;UBERON:0001986,8.94e-14,18;UBERON:0004852,8.94e-14,18;UBERON:0002049,2.88e-13,78;UBERON:0007798,2.88e-13,78;UBERON:0000487,2.62e-12,22;UBERON:0000055,8.62e-12,68;UBERON:0003915,1.01e-11,9;UBERON:0004700,1.01e-11,9;UBERON:0001917,1.01e-11,9;UBERON:0007500,1.52e-10,59;UBERON:0001981,1.52e-10,59;UBERON:0004537,1.52e-10,59;UBERON:0006965,1.52e-10,59;UBERON:0004535,1.87e-10,109;UBERON:0006914,2.40e-10,25;UBERON:0004872,5.38e-10,83;UBERON:0001009,6.64e-10,112;UBERON:0001637,4.72e-09,42;UBERON:0003509,4.72e-09,42;UBERON:0004572,4.72e-09,42;UBERON:0003914,9.46e-09,117;UBERON:0002199,2.86e-07,46;UBERON:0002416,2.86e-07,46;UBERON:0000490,7.07e-07,148 | |||
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| ||
|short_description=p13@DLC1 | |||
}} | }} |
Latest revision as of 09:46, 16 September 2015
Short description: | p13@DLC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_DLC1_5end |
Coexpression cluster: | C2918_Mast_mesothelioma_spindle_mesodermal_myxofibrosarcoma_lens_neurofibroma |
Association with transcript: | 69bp_to_ENST00000512044_5end |
EntrezGene: | DLC1 |
HGNC: | 2897 |
UniProt: | E9PDZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.16e-16 | 24 |
endothelial cell | 1.71e-14 | 36 |
fibroblast | 2.48e-14 | 76 |
blood vessel endothelial cell | 8.94e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.94e-14 | 18 |
endothelial cell of artery | 1.01e-11 | 9 |
mesodermal cell | 5.49e-11 | 121 |
lining cell | 9.66e-11 | 58 |
barrier cell | 9.66e-11 | 58 |
meso-epithelial cell | 2.26e-10 | 45 |
skin fibroblast | 8.91e-09 | 23 |
multi fate stem cell | 1.43e-07 | 427 |
aortic endothelial cell | 1.84e-07 | 6 |
somatic stem cell | 3.52e-07 | 433 |
preadipocyte | 3.53e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 8.94e-14 | 18 |
endothelium | 8.94e-14 | 18 |
cardiovascular system endothelium | 8.94e-14 | 18 |
vasculature | 2.88e-13 | 78 |
vascular system | 2.88e-13 | 78 |
simple squamous epithelium | 2.62e-12 | 22 |
vessel | 8.62e-12 | 68 |
endothelial tube | 1.01e-11 | 9 |
arterial system endothelium | 1.01e-11 | 9 |
endothelium of artery | 1.01e-11 | 9 |
epithelial tube open at both ends | 1.52e-10 | 59 |
blood vessel | 1.52e-10 | 59 |
blood vasculature | 1.52e-10 | 59 |
vascular cord | 1.52e-10 | 59 |
cardiovascular system | 1.87e-10 | 109 |
squamous epithelium | 2.40e-10 | 25 |
splanchnic layer of lateral plate mesoderm | 5.38e-10 | 83 |
circulatory system | 6.64e-10 | 112 |
artery | 4.72e-09 | 42 |
arterial blood vessel | 4.72e-09 | 42 |
arterial system | 4.72e-09 | 42 |
epithelial tube | 9.46e-09 | 117 |
integument | 2.86e-07 | 46 |
integumental system | 2.86e-07 | 46 |
unilaminar epithelium | 7.07e-07 | 148 |