FFCP PHASE1:Hg19::chr12:110434100..110434139,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9815 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4273 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000361006,ENST00000457474,ENST00000547815_5end | |||
|cluster_id=chr12:110434100..110434139,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_2_at_GIT2_5end | |||
|id=chr12:110434100..110434139,- | |||
|ontology_enrichment_celltype=CL:0000738!1.30e-43!140;CL:0000037!1.55e-43!172;CL:0000566!1.55e-43!172;CL:0002087!3.85e-40!119;CL:0002032!5.75e-40!165;CL:0000837!5.75e-40!165;CL:0000988!2.71e-39!182;CL:0002031!6.80e-35!124;CL:0000766!1.84e-24!76;CL:0000763!6.02e-23!112;CL:0000049!6.02e-23!112;CL:0002009!1.14e-22!65;CL:0002194!2.55e-22!63;CL:0000576!2.55e-22!63;CL:0000040!2.55e-22!63;CL:0000559!2.55e-22!63;CL:0000557!8.74e-21!71;CL:0000839!2.48e-18!70;CL:0002057!3.65e-18!42;CL:0000860!5.16e-16!45;CL:0000838!1.10e-15!52;CL:0000542!1.25e-15!53;CL:0000051!1.25e-15!53;CL:0000048!2.89e-14!430;CL:0000134!3.12e-14!358;CL:0000723!4.35e-13!436;CL:0002320!1.30e-12!365;CL:0000034!2.75e-12!444;CL:0000219!2.22e-10!390;CL:0000791!1.29e-09!18;CL:0000789!1.29e-09!18;CL:0002420!1.29e-09!18;CL:0002419!1.29e-09!18;CL:0000790!1.29e-09!18;CL:0000084!4.88e-08!25;CL:0000827!4.88e-08!25;CL:0000945!4.92e-08!24;CL:0000826!4.92e-08!24;CL:0000236!5.70e-08!14;CL:0000625!9.03e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.77e-13;48!CL:0000473;5.47e-13;39!CL:0000234;5.47e-13;39!CL:0000860;2.17e-12;33!CL:0002057;2.17e-12;33!CL:0002087;2.12e-11;104!CL:0000766;3.81e-11;69!CL:0000738;3.17e-10;136!CL:0000542;9.81e-10;53!CL:0000791;1.20e-09;18!CL:0000789;1.20e-09;18!CL:0002419;1.20e-09;18!CL:0000763;3.09e-08;100!CL:0000084;3.29e-08;25!CL:0000945;4.51e-08;24!CL:0000236;5.72e-08;13!CL:0000988;1.36e-07;177!CL:0000625;8.45e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.03e-46,136;CL:0000037,1.80e-45,168;CL:0002087,1.44e-42,115;CL:0002032,7.55e-42,161;CL:0000837,7.55e-42,161;CL:0000988,1.95e-41,177;CL:0002031,5.23e-37,120;CL:0000766,7.63e-27,72;CL:0002009,3.23e-25,61;CL:0002194,6.69e-25,59;CL:0000576,6.69e-25,59;CL:0000040,6.69e-25,59;CL:0000559,6.69e-25,59;CL:0000763,1.24e-24,108;CL:0000049,1.24e-24,108;CL:0000557,5.34e-23,67;CL:0000473,5.58e-21,48;CL:0000234,5.58e-21,48;CL:0000839,2.32e-20,66;CL:0000860,3.64e-18,42;CL:0002057,3.64e-18,42;CL:0000838,1.09e-15,52;CL:0000542,1.24e-15,53;CL:0000051,1.24e-15,53;CL:0000134,6.57e-15,354;CL:0000048,1.64e-14,427;CL:0000723,2.54e-13,433;CL:0002320,3.10e-13,361;CL:0000034,1.65e-12,441;CL:0000219,6.40e-11,386;CL:0000791,1.29e-09,18;CL:0000789,1.29e-09,18;CL:0002420,1.29e-09,18;CL:0002419,1.29e-09,18;CL:0000790,1.29e-09,18;CL:0000084,4.88e-08,25;CL:0000827,4.88e-08,25;CL:0000945,4.91e-08,24;CL:0000826,4.91e-08,24;CL:0000236,5.70e-08,14;CL:0000625,9.02e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.66e-13;42!CL:0000051;9.81e-10;53!CL:0000790;1.20e-09;18!CL:0000049;1.87e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.85e-28!112;UBERON:0002390!1.04e-27!102;UBERON:0003061!1.04e-27!102;UBERON:0002371!3.37e-18!80;UBERON:0003081!1.08e-16!216;UBERON:0001474!1.83e-15!86;UBERON:0002405!8.92e-15!115;UBERON:0004765!4.93e-14!101;UBERON:0001434!4.93e-14!101;UBERON:0002384!3.40e-12!375;UBERON:0002204!5.46e-11!167;UBERON:0000178!1.15e-07!15;UBERON:0000179!1.15e-07!15;UBERON:0000463!1.15e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.32e-07;15!UBERON:0000179;1.32e-07;15!UBERON:0000463;1.32e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.83e-30,98;UBERON:0003061,8.83e-30,98;UBERON:0002193,9.17e-30,108;UBERON:0002405,3.28e-23,93;UBERON:0002371,5.15e-20,76;UBERON:0003081,6.94e-19,203;UBERON:0001474,5.75e-17,82;UBERON:0004765,1.55e-14,90;UBERON:0001434,1.13e-13,100;UBERON:0002384,8.44e-13,371;UBERON:0002204,2.92e-10,167;UBERON:0000178,1.15e-07,15;UBERON:0000179,1.15e-07,15;UBERON:0000463,1.15e-07,15 | |||
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| |||
|short_description=p2@GIT2 | |||
}} |
Latest revision as of 07:40, 16 September 2015
Short description: | p2@GIT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GIT2_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000361006, ENST00000457474, ENST00000547815_5end |
EntrezGene: | GIT2 |
HGNC: | 4273 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.83e-30 | 98 |
blood island | 8.83e-30 | 98 |
hemolymphoid system | 9.17e-30 | 108 |
immune system | 3.28e-23 | 93 |
bone marrow | 5.15e-20 | 76 |
lateral plate mesoderm | 6.94e-19 | 203 |
bone element | 5.75e-17 | 82 |
skeletal element | 1.55e-14 | 90 |
skeletal system | 1.13e-13 | 100 |
connective tissue | 8.44e-13 | 371 |
musculoskeletal system | 2.92e-10 | 167 |
blood | 1.15e-07 | 15 |
haemolymphatic fluid | 1.15e-07 | 15 |
organism substance | 1.15e-07 | 15 |