FFCP PHASE1:Hg19::chr8:12990782..12990807,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:12990782..12990807,-
|short_description=p1@DLC1
|description=CAGE_peak_1_at_DLC1_5end
|association_with_transcript=0bp_to_ENST00000515225_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10395 | |EntrezGene=10395 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2897 | |HGNC=2897 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000515225_5end | |||
|cluster_id=chr8:12990782..12990807,- | |||
|description=CAGE_peak_1_at_DLC1_5end | |||
|id=chr8:12990782..12990807,- | |||
|ontology_enrichment_celltype=CL:0000055!2.92e-24!180;CL:0000057!5.73e-19!75;CL:0000222!2.51e-16!119;CL:0000183!2.72e-11!59;CL:0000187!4.34e-11!54;CL:0000680!5.90e-11!57;CL:0000056!5.90e-11!57;CL:0000355!5.90e-11!57;CL:0000393!1.25e-08!60;CL:0000211!1.25e-08!60;CL:0000192!2.98e-08!42;CL:0000514!2.98e-08!42;CL:0002620!4.03e-08!23;CL:0000136!5.67e-07!15;CL:0000359!6.10e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000057;8.04e-09;73!CL:0002620;3.73e-08;23!CL:0000187;7.92e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.05e-19,76;CL:0000222,1.47e-16,121;CL:0000187,2.14e-11,55;CL:0000680,2.93e-11,58;CL:0000056,2.93e-11,58;CL:0000355,2.93e-11,58;CL:0000393,6.61e-09,61;CL:0000211,6.61e-09,61;CL:0000192,1.54e-08,43;CL:0000514,1.54e-08,43;CL:0002620,3.77e-08,23;CL:0000136,5.36e-07,15;CL:0000359,5.78e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.29e-16!79;UBERON:0007798!4.29e-16!79;UBERON:0003914!5.27e-16!118;UBERON:0000475!5.43e-16!365;UBERON:0004872!1.18e-15!84;UBERON:0005256!4.18e-14!143;UBERON:0000119!4.55e-14!312;UBERON:0001009!6.02e-14!113;UBERON:0004535!8.31e-14!110;UBERON:0000483!1.32e-13!309;UBERON:0000055!4.39e-13!69;UBERON:0000914!1.49e-12!83;UBERON:0002329!1.49e-12!83;UBERON:0003077!1.49e-12!83;UBERON:0003059!1.49e-12!83;UBERON:0007282!1.49e-12!83;UBERON:0009618!1.49e-12!83;UBERON:0007285!1.49e-12!83;UBERON:0000468!2.13e-12!659;UBERON:0002100!3.71e-12!216;UBERON:0001981!4.22e-12!60;UBERON:0007500!4.22e-12!60;UBERON:0004537!4.22e-12!60;UBERON:0006965!4.22e-12!60;UBERON:0004290!1.45e-11!70;UBERON:0001134!3.80e-11!61;UBERON:0002036!3.80e-11!61;UBERON:0003082!3.80e-11!61;UBERON:0004111!5.96e-11!241;UBERON:0000025!7.64e-11!194;UBERON:0002385!8.46e-11!63;UBERON:0001015!8.46e-11!63;UBERON:0000383!8.46e-11!63;UBERON:0000477!8.69e-11!286;UBERON:0000490!5.47e-10!138;UBERON:0001637!1.67e-09!42;UBERON:0003509!1.67e-09!42;UBERON:0004572!1.67e-09!42;UBERON:0000486!2.34e-09!82;UBERON:0000481!4.11e-09!347;UBERON:0000467!1.02e-08!625;UBERON:0004573!1.45e-08!33;UBERON:0004571!1.45e-08!33;UBERON:0000480!1.86e-08!626;UBERON:0000947!7.57e-07!21;UBERON:0010191!7.57e-07!21;UBERON:0000948!8.83e-07!24;UBERON:0005498!8.83e-07!24;UBERON:0004140!8.83e-07!24;UBERON:0009881!8.83e-07!24;UBERON:0004141!8.83e-07!24;UBERON:0003084!8.83e-07!24;UBERON:0007005!8.83e-07!24;UBERON:0004139!8.83e-07!24;UBERON:0004291!8.83e-07!24;UBERON:0007100!9.69e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.60e-08;33!UBERON:0004571;6.60e-08;33!UBERON:0001637;2.53e-07;42!UBERON:0003509;2.53e-07;42!UBERON:0004572;2.53e-07;42!UBERON:0000947;7.38e-07;21!UBERON:0010191;7.38e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.22e-15,78;UBERON:0007798,1.22e-15,78;UBERON:0003914,1.34e-15,117;UBERON:0004872,2.97e-15,83;UBERON:0000119,1.06e-14,309;UBERON:0000483,3.17e-14,306;UBERON:0007503,1.05e-13,78;UBERON:0001009,2.10e-13,112;UBERON:0003104,2.72e-13,160;UBERON:0009142,2.72e-13,160;UBERON:0004535,2.91e-13,109;UBERON:0000055,1.11e-12,68;UBERON:0007524,3.94e-12,73;UBERON:0005256,5.69e-12,122;UBERON:0002329,7.22e-12,71;UBERON:0003059,7.22e-12,71;UBERON:0007282,7.22e-12,71;UBERON:0004290,7.22e-12,71;UBERON:0009618,7.22e-12,71;UBERON:0003077,1.07e-11,72;UBERON:0007285,1.07e-11,72;UBERON:0007500,1.19e-11,59;UBERON:0001981,1.19e-11,59;UBERON:0004537,1.19e-11,59;UBERON:0006965,1.19e-11,59;UBERON:0001134,1.88e-11,62;UBERON:0002036,1.88e-11,62;UBERON:0003082,1.88e-11,62;UBERON:0002385,4.24e-11,64;UBERON:0001015,4.24e-11,64;UBERON:0000383,4.24e-11,64;UBERON:0000490,8.15e-11,148;UBERON:0004111,1.29e-10,240;UBERON:0002100,1.45e-10,199;UBERON:0000025,3.74e-10,192;UBERON:0000486,1.16e-09,83;UBERON:0001637,1.54e-09,42;UBERON:0003509,1.54e-09,42;UBERON:0004572,1.54e-09,42;UBERON:0004573,1.35e-08,33;UBERON:0004571,1.35e-08,33;UBERON:0002199,7.13e-07,46;UBERON:0002416,7.13e-07,46;UBERON:0000947,7.17e-07,21;UBERON:0010191,7.17e-07,21;UBERON:0000948,8.38e-07,24;UBERON:0005498,8.38e-07,24;UBERON:0004140,8.38e-07,24;UBERON:0009881,8.38e-07,24;UBERON:0004141,8.38e-07,24;UBERON:0003084,8.38e-07,24;UBERON:0007005,8.38e-07,24;UBERON:0004139,8.38e-07,24;UBERON:0004291,8.38e-07,24;UBERON:0007100,9.19e-07,27 | |||
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| ||
|short_description=p1@DLC1 | |||
}} | }} |
Latest revision as of 08:15, 16 September 2015
Short description: | p1@DLC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DLC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000515225_5end |
EntrezGene: | DLC1 |
HGNC: | 2897 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.05e-19 | 76 |
mesodermal cell | 1.47e-16 | 121 |
muscle cell | 2.14e-11 | 55 |
muscle precursor cell | 2.93e-11 | 58 |
myoblast | 2.93e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.93e-11 | 58 |
electrically responsive cell | 6.61e-09 | 61 |
electrically active cell | 6.61e-09 | 61 |
smooth muscle cell | 1.54e-08 | 43 |
smooth muscle myoblast | 1.54e-08 | 43 |
skin fibroblast | 3.77e-08 | 23 |
fat cell | 5.36e-07 | 15 |
vascular associated smooth muscle cell | 5.78e-07 | 32 |