FFCP PHASE1:Hg19::chr12:100985946..100985951,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:100985946..100985951,+ | |||
|coexpression_cluster_id=C177 | |||
|description=CAGE_peak_at_chr12:100985946..100985951,+ | |||
|id=chr12:100985946..100985951,+ | |||
|ontology_enrichment_celltype=CL:0000148!1.22e-32!10;CL:0000541!1.22e-32!10;CL:0000147!3.18e-23!14;CL:0000710!3.82e-16!20;CL:0000333!1.29e-12!41;CL:0000075!7.54e-12!27;CL:0002566!2.50e-10!1;CL:0002077!1.30e-09!33;CL:0000133!1.35e-08!59;CL:0000325!4.63e-08!39;CL:0000221!5.15e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000148;9.44e-21;10!CL:0000147;3.66e-15;14!CL:0000149;1.13e-13;4!CL:0000710;6.00e-11;20!CL:0000075;2.22e-08;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.04e-20,10;CL:0000541,1.04e-20,10;CL:0000147,3.93e-15,14;CL:0000149,1.13e-13,4;CL:0000710,6.30e-11,20;CL:0000075,2.30e-08,27;CL:0002077,7.59e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!5.34e-20!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;9.38e-99;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.68e-99,2 | |||
|ontology_enrichment_uberon=UBERON:0001896!1.06e-12!3;UBERON:0005290!1.06e-12!3;UBERON:0010096!1.06e-12!3;UBERON:0002135!1.43e-10!1;UBERON:0002298!1.45e-10!8;UBERON:0002038!2.28e-10!1;UBERON:0009661!2.28e-10!1;UBERON:0004733!3.01e-07!12;UBERON:0002028!3.01e-07!12;UBERON:0007277!3.01e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;2.75e-14;15!UBERON:0007376;2.75e-14;15!UBERON:0010371;1.13e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,2.58e-14,15;UBERON:0007376,2.58e-14,15;UBERON:0007383,2.58e-14,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,1.23392991243988,1.50171528921959,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,5.91431558412426,1.7127920012698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:100985946..100985951,+ | |||
}} |
Latest revision as of 03:55, 24 July 2015
Short description: | p@chr12:100985946..100985951, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:100985946..100985951, + |
Coexpression cluster: | C177_melanoma_Melanocyte_mesenchymal_retina_Mallassezderived_Gingival_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.04e-20 | 10 |
melanoblast | 1.04e-20 | 10 |
pigment cell | 3.93e-15 | 14 |
visual pigment cell | 1.13e-13 | 4 |
neurecto-epithelial cell | 6.30e-11 | 20 |
columnar/cuboidal epithelial cell | 2.30e-08 | 27 |
ecto-epithelial cell | 7.59e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 2.58e-14 | 15 |
outer epithelium | 2.58e-14 | 15 |
enveloping layer of ectoderm | 2.58e-14 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.68e-99 | 2 |